RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 EEF1AKMT3Q96AZ1 226 aa2.26□□□□□ -2.05
CBX3-207ENST00000481300 TMIGD2Q96BF3 282 aa2.26□□□□□ -2.05
CBX3-207ENST00000481300 GALNT14Q96FL9 552 aa2.26□□□□□ -2.05
CBX3-207ENST00000481300 MRPL48Q96GC5 212 aaKnown RBP2.26□□□□□ -2.05
CBX3-207ENST00000481300 SLC25A44Q96H78 314 aaPredicted RBP2.26□□□□□ -2.05
CBX3-207ENST00000481300 TBX5Q99593 518 aa2.26□□□□□ -2.05
CBX3-207ENST00000481300 EMC6Q9BV81 110 aa2.26□□□□□ -2.05
CBX3-207ENST00000481300 MND1Q9BWT6 205 aa2.26□□□□□ -2.05
CBX3-207ENST00000481300 CDCA4Q9BXL8 241 aa2.26□□□□□ -2.05
CBX3-207ENST00000481300 SYT4Q9H2B2 425 aa2.26□□□□□ -2.05
CBX3-207ENST00000481300 SAV1Q9H4B6 383 aaPredicted RBP2.26□□□□□ -2.05
CBX3-207ENST00000481300 ACOT13Q9NPJ3 140 aa2.26□□□□□ -2.05
CBX3-207ENST00000481300 FKBP14Q9NWM8 211 aa2.26□□□□□ -2.05
CBX3-207ENST00000481300 GLTPQ9NZD2 209 aa2.26□□□□□ -2.05
CBX3-207ENST00000481300 EMC3Q9P0I2 261 aa2.26□□□□□ -2.05
CBX3-207ENST00000481300 CLEC2DQ9UHP7 191 aa2.26□□□□□ -2.05
CBX3-207ENST00000481300 MCTS1Q9ULC4 181 aaKnown RBP2.26□□□□□ -2.05
CBX3-207ENST00000481300 AHCTF1Q8WYP5 2266 aa2.26□□□□□ -2.05
CBX3-207ENST00000481300 USP34Q70CQ2 3546 aa2.26□□□□□ -2.05
CBX3-207ENST00000481300 FRYLO94915 3013 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 WDR87Q6ZQQ6 2873 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 ASCC3Q8N3C0 2202 aaKnown RBP2.25□□□□□ -2.05
CBX3-207ENST00000481300 LAMA1P25391 3075 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 KMT2EQ8IZD2 1858 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 ZNF292O60281 2723 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 A0A075B6Q4 140 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 SMIM31A0A1B0GVY4 71 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 A0A1W2PQL4 384 aaPredicted RBP2.25□□□□□ -2.05
CBX3-207ENST00000481300 TMEM223A0PJW6 202 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 LRCOL1A6NCL2 159 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 CCDC160A6NGH7 325 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 METTL15A6NJ78 407 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 ZNF670-ZNF695F2Z2N8 137 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 H3BSA7 217 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 J3QLW9 94 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 J3QRE1 110 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 ZNF593O00488 134 aaPredicted RBP2.25□□□□□ -2.05
CBX3-207ENST00000481300 MYL12BO14950 172 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 RBFOX2O43251 390 aaKnown RBP eCLIP2.25□□□□□ -2.05
CBX3-207ENST00000481300 MRPL33O75394 65 aaKnown RBP2.25□□□□□ -2.05
CBX3-207ENST00000481300 RP2O75695 350 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 AQP8O94778 261 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 MPZL1O95297 269 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 PTHP01270 115 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 ARG1P05089 322 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 ADRA2AP08913 450 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 LIMS3P0CW19 117 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 LIMS4P0CW20 117 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 PGA4P0DJD7 388 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 PGA3P0DJD8 388 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 SFTPCP11686 197 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 DTYMKP23919 212 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 GUCA1AP43080 201 aaPredicted RBP2.25□□□□□ -2.05
CBX3-207ENST00000481300 RND2P52198 227 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 GTF2A1P52655 376 aaPredicted RBP2.25□□□□□ -2.05
CBX3-207ENST00000481300 HCCSP53701 268 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 GLO1Q04760 184 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 FMODQ06828 376 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 HIST3H3Q16695 136 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 LINC00303Q3SY05 128 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 SMUG1Q53HV7 270 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 SYT6Q5T7P8 510 aaPredicted RBP2.25□□□□□ -2.05
CBX3-207ENST00000481300 LINC01590Q5TEZ4 76 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 GPR107Q5VW38 600 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 XAF1Q6GPH4 301 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 ZNF322Q6U7Q0 402 aaPredicted RBP2.25□□□□□ -2.05
CBX3-207ENST00000481300 FBXW12Q6X9E4 464 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 TMPRSS11AQ6ZMR5 421 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 CLVS1Q8IUQ0 354 aaPredicted RBP2.25□□□□□ -2.05
CBX3-207ENST00000481300 WDFY1Q8IWB7 410 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 ZFP41Q8N8Y5 198 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 OR6N2Q8NGY6 317 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 OR2T27Q8NH04 317 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 OR52N1Q8NH53 320 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 COQ8AQ8NI60 647 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 THEM6Q8WUY1 208 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 LRRC29Q8WV35 223 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 ASB17Q8WXJ9 295 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 C11orf40Q8WZ69 217 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 TMEM230Q96A57 120 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 DGCR14Q96DF8 476 aaKnown RBP2.25□□□□□ -2.05
CBX3-207ENST00000481300 LINC00477Q96M19 166 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 CAMK2N2Q96S95 79 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 MGLLQ99685 303 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 SPIN2AQ99865 258 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 SPIN2BQ9BPZ2 258 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 ULBP2Q9BZM5 246 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 YIPF3Q9GZM5 350 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 PRORYQ9H606 182 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 RNF122Q9H9V4 155 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 BABAM2Q9NXR7 383 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 POLR1DQ9Y2S0 133 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 NOSIPQ9Y314 301 aaKnown RBP2.25□□□□□ -2.05
CBX3-207ENST00000481300 LSM2Q9Y333 95 aaKnown RBP2.25□□□□□ -2.05
CBX3-207ENST00000481300 CAB39Q9Y376 341 aaPredicted RBP2.25□□□□□ -2.05
CBX3-207ENST00000481300 NCOR2Q9Y618 2525 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 RP1P56715 2156 aa2.25□□□□□ -2.05
CBX3-207ENST00000481300 CNOT1A5YKK6 2376 aaKnown RBP2.24□□□□□ -2.05
CBX3-207ENST00000481300 TNRC6BQ9UPQ9 1833 aaKnown RBP2.24□□□□□ -2.05
CBX3-207ENST00000481300 KNTC1P50748 2209 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms