RNA–Protein interactions for RNA: ENST00000481121.5

NELFE-208, Transcript of negative elongation factor complex member E, humanhuman

TSL 2

Gene NELFE, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-208ENST00000481121 COMMD1Q8N668 190 aa16.38■□□□□ 0.21
NELFE-208ENST00000481121 ZNF645Q8N7E2 425 aa16.38■□□□□ 0.21
NELFE-208ENST00000481121 CMTM3Q96MX0 182 aa16.38■□□□□ 0.21
NELFE-208ENST00000481121 FBXL15Q9H469 300 aa16.38■□□□□ 0.21
NELFE-208ENST00000481121 IGF1P05019 195 aa16.37■□□□□ 0.21
NELFE-208ENST00000481121 PF4V1P10720 104 aa16.37■□□□□ 0.21
NELFE-208ENST00000481121 CBX3Q13185 183 aa16.37■□□□□ 0.21
NELFE-208ENST00000481121 TSNAXQ99598 290 aaKnown RBP16.37■□□□□ 0.21
NELFE-208ENST00000481121 PARP11Q9NR21 331 aa16.37■□□□□ 0.21
NELFE-208ENST00000481121 NECAP2Q9NVZ3 263 aa16.37■□□□□ 0.21
NELFE-208ENST00000481121 SPDEFO95238 335 aa16.36■□□□□ 0.21
NELFE-208ENST00000481121 HLA-DQB1P01920 261 aa16.36■□□□□ 0.21
NELFE-208ENST00000481121 RPS16P62249 146 aaKnown RBP16.36■□□□□ 0.21
NELFE-208ENST00000481121 TAGLNQ01995 201 aaKnown RBP16.36■□□□□ 0.21
NELFE-208ENST00000481121 RTL8BQ17RB0 113 aa16.36■□□□□ 0.21
NELFE-208ENST00000481121 MZT2AQ6P582 158 aa16.36■□□□□ 0.21
NELFE-208ENST00000481121 TEX38Q6PEX7 206 aa16.36■□□□□ 0.21
NELFE-208ENST00000481121 CLVS1Q8IUQ0 354 aaPredicted RBP16.36■□□□□ 0.21
NELFE-208ENST00000481121 SNAPC3Q92966 411 aa16.36■□□□□ 0.21
NELFE-208ENST00000481121 FLYWCH2Q96CP2 140 aaKnown RBP16.36■□□□□ 0.21
NELFE-208ENST00000481121 ADTRPQ96IZ2 230 aa16.36■□□□□ 0.21
NELFE-208ENST00000481121 OR51J1Q9H342 316 aa16.36■□□□□ 0.21
NELFE-208ENST00000481121 ZNF580Q9UK33 172 aa16.36■□□□□ 0.21
NELFE-208ENST00000481121 IGHV7-81A0A0B4J1V7 117 aa16.35■□□□□ 0.21
NELFE-208ENST00000481121 SMIM31A0A1B0GVY4 71 aa16.35■□□□□ 0.21
NELFE-208ENST00000481121 ATP6V0E1O15342 81 aa16.35■□□□□ 0.21
NELFE-208ENST00000481121 HPGDSO60760 199 aa16.35■□□□□ 0.21
NELFE-208ENST00000481121 OR5H8P0DN80 308 aa16.35■□□□□ 0.21
NELFE-208ENST00000481121 ZNF182P17025 639 aaPredicted RBP16.35■□□□□ 0.21
NELFE-208ENST00000481121 METTL1Q9UBP6 276 aaKnown RBP16.35■□□□□ 0.21
NELFE-208ENST00000481121 TUSC2O75896 110 aa16.35■□□□□ 0.21
NELFE-208ENST00000481121 SLC22A5O76082 557 aa16.35■□□□□ 0.21
NELFE-208ENST00000481121 ELK1P19419 428 aa16.35■□□□□ 0.21
NELFE-208ENST00000481121 DUTP33316 252 aaKnown RBP16.35■□□□□ 0.21
NELFE-208ENST00000481121 PSG5Q15238 335 aa16.35■□□□□ 0.21
NELFE-208ENST00000481121 BVESQ8NE79 360 aa16.35■□□□□ 0.21
NELFE-208ENST00000481121 OR5AP2Q8NGF4 316 aa16.35■□□□□ 0.21
NELFE-208ENST00000481121 RAB2BQ8WUD1 216 aa16.35■□□□□ 0.21
NELFE-208ENST00000481121 HARBI1Q96MB7 349 aa16.35■□□□□ 0.21
NELFE-208ENST00000481121 IGKV1D-13A0A0B4J2D9 117 aa16.34■□□□□ 0.21
NELFE-208ENST00000481121 IGKV1-13P0DP09 117 aa16.34■□□□□ 0.21
NELFE-208ENST00000481121 RRASP10301 218 aa16.34■□□□□ 0.21
NELFE-208ENST00000481121 FCGR2CP31995 323 aa16.34■□□□□ 0.21
NELFE-208ENST00000481121 PRSS3P35030 304 aa16.34■□□□□ 0.21
NELFE-208ENST00000481121 RPL23AP62750 156 aaKnown RBP16.34■□□□□ 0.21
NELFE-208ENST00000481121 CFHR3Q02985 330 aa16.34■□□□□ 0.21
NELFE-208ENST00000481121 MRPS7Q9Y2R9 242 aaKnown RBP16.34■□□□□ 0.21
NELFE-208ENST00000481121 LINC00473A8K010 186 aa16.33■□□□□ 0.2
NELFE-208ENST00000481121 SLC25A17O43808 307 aa16.33■□□□□ 0.2
NELFE-208ENST00000481121 RPL5P46777 297 aaKnown RBP16.33■□□□□ 0.2
NELFE-208ENST00000481121 CDK10Q15131 360 aa16.33■□□□□ 0.2
NELFE-208ENST00000481121 CXorf66Q5JRM2 361 aaPredicted RBP16.33■□□□□ 0.2
NELFE-208ENST00000481121 KCTD9Q7L273 389 aa16.33■□□□□ 0.2
NELFE-208ENST00000481121 DDB2Q92466 427 aa16.33■□□□□ 0.2
NELFE-208ENST00000481121 ZFP57Q9NU63 452 aa16.33■□□□□ 0.2
NELFE-208ENST00000481121 RBMX2Q9Y388 322 aaKnown RBP16.33■□□□□ 0.2
NELFE-208ENST00000481121 FAM25AB3EWG3 89 aa16.32■□□□□ 0.2
NELFE-208ENST00000481121 FAM25CB3EWG5 89 aa16.32■□□□□ 0.2
NELFE-208ENST00000481121 FAM25GB3EWG6 89 aa16.32■□□□□ 0.2
NELFE-208ENST00000481121 SHOXO15266 292 aa16.32■□□□□ 0.2
NELFE-208ENST00000481121 NOL3O60936 208 aaKnown RBP16.32■□□□□ 0.2
NELFE-208ENST00000481121 PF4P02776 101 aa16.32■□□□□ 0.2
NELFE-208ENST00000481121 AADACP22760 399 aa16.32■□□□□ 0.2
NELFE-208ENST00000481121 NDPQ00604 133 aa16.32■□□□□ 0.2
NELFE-208ENST00000481121 FOXE3Q13461 319 aa16.32■□□□□ 0.2
NELFE-208ENST00000481121 SPCS2Q15005 226 aa16.32■□□□□ 0.2
NELFE-208ENST00000481121 TMEM177Q53S58 311 aa16.32■□□□□ 0.2
NELFE-208ENST00000481121 ZNF660Q6AZW8 331 aaPredicted RBP16.32■□□□□ 0.2
NELFE-208ENST00000481121 ABHD5Q8WTS1 349 aa16.32■□□□□ 0.2
NELFE-208ENST00000481121 CLCC1Q96S66 551 aa16.32■□□□□ 0.2
NELFE-208ENST00000481121 BCL7BQ9BQE9 202 aa16.32■□□□□ 0.2
NELFE-208ENST00000481121 ANAPC10Q9UM13 185 aa16.32■□□□□ 0.2
NELFE-208ENST00000481121 WSB1Q9Y6I7 421 aa16.32■□□□□ 0.2
NELFE-208ENST00000481121 TRAV41A0A0B4J266 112 aa16.31■□□□□ 0.2
NELFE-208ENST00000481121 NUDT19A8MXV4 375 aa16.31■□□□□ 0.2
NELFE-208ENST00000481121 CA2P00918 260 aa16.31■□□□□ 0.2
NELFE-208ENST00000481121 PPYP01298 95 aa16.31■□□□□ 0.2
NELFE-208ENST00000481121 IGLV2-14P01704 120 aa16.31■□□□□ 0.2
NELFE-208ENST00000481121 IGHG4P01861 327 aa16.31■□□□□ 0.2
NELFE-208ENST00000481121 ELANEP08246 267 aa16.31■□□□□ 0.2
NELFE-208ENST00000481121 LGALS7P47929 136 aa16.31■□□□□ 0.2
NELFE-208ENST00000481121 TMBIM6P55061 237 aa16.31■□□□□ 0.2
NELFE-208ENST00000481121 CX3CL1P78423 397 aa16.31■□□□□ 0.2
NELFE-208ENST00000481121 ECSCRQ19T08 205 aa16.31■□□□□ 0.2
NELFE-208ENST00000481121 SNX29P2Q8IUI4 249 aa16.31■□□□□ 0.2
NELFE-208ENST00000481121 KLHL30-AS1Q8NEE0 82 aa16.31■□□□□ 0.2
NELFE-208ENST00000481121 SECTM1Q8WVN6 248 aa16.31■□□□□ 0.2
NELFE-208ENST00000481121 TPSG1Q9NRR2 321 aa16.31■□□□□ 0.2
NELFE-208ENST00000481121 EHFQ9NZC4 300 aa16.31■□□□□ 0.2
NELFE-208ENST00000481121 G3V318 75 aa16.3■□□□□ 0.2
NELFE-208ENST00000481121 FCN1O00602 326 aa16.3■□□□□ 0.2
NELFE-208ENST00000481121 CRYZL1O95825 349 aa16.3■□□□□ 0.2
NELFE-208ENST00000481121 RPLP1P05386 114 aaKnown RBP16.3■□□□□ 0.2
NELFE-208ENST00000481121 TAS2R46P59540 309 aa16.3■□□□□ 0.2
NELFE-208ENST00000481121 SCPEP1Q9HB40 452 aa16.3■□□□□ 0.2
NELFE-208ENST00000481121 PRELID3BQ9Y3B1 194 aa16.3■□□□□ 0.2
NELFE-208ENST00000481121 FBXO7Q9Y3I1 522 aa16.3■□□□□ 0.2
NELFE-208ENST00000481121 IGLV2-23P01705 113 aa16.29■□□□□ 0.2
NELFE-208ENST00000481121 SLC6A1P30531 599 aa16.29■□□□□ 0.2
NELFE-208ENST00000481121 FXYD4P59646 89 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms