RNA–Protein interactions for RNA: ENST00000481116.5

ABCF3-215, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-215ENST00000481116 EGR2P11161 476 aaPredicted RBP10.05□□□□□ -0.8
ABCF3-215ENST00000481116 NFYAP23511 347 aaPredicted RBP10.05□□□□□ -0.8
ABCF3-215ENST00000481116 PSMB8P28062 276 aa10.05□□□□□ -0.8
ABCF3-215ENST00000481116 RPS19P39019 145 aaKnown RBP10.05□□□□□ -0.8
ABCF3-215ENST00000481116 GNG2P59768 71 aa10.05□□□□□ -0.8
ABCF3-215ENST00000481116 CX3CL1P78423 397 aa10.05□□□□□ -0.8
ABCF3-215ENST00000481116 ARL6IP1Q15041 203 aa10.05□□□□□ -0.8
ABCF3-215ENST00000481116 RNF152Q8N8N0 203 aa10.05□□□□□ -0.8
ABCF3-215ENST00000481116 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.05□□□□□ -0.8
ABCF3-215ENST00000481116 ABHD5Q8WTS1 349 aa10.05□□□□□ -0.8
ABCF3-215ENST00000481116 CASTOR1Q8WTX7 329 aa10.05□□□□□ -0.8
ABCF3-215ENST00000481116 P2RX4Q99571 388 aa10.05□□□□□ -0.8
ABCF3-215ENST00000481116 FAM103A1Q9BTL3 118 aaKnown RBP10.05□□□□□ -0.8
ABCF3-215ENST00000481116 CCL24O00175 119 aa10.04□□□□□ -0.8
ABCF3-215ENST00000481116 SLC25A17O43808 307 aa10.04□□□□□ -0.8
ABCF3-215ENST00000481116 SOX15O60248 233 aa10.04□□□□□ -0.8
ABCF3-215ENST00000481116 RBBP9O75884 186 aa10.04□□□□□ -0.8
ABCF3-215ENST00000481116 SCGNO76038 276 aa10.04□□□□□ -0.8
ABCF3-215ENST00000481116 DIRAS3O95661 229 aa10.04□□□□□ -0.8
ABCF3-215ENST00000481116 CA2P00918 260 aa10.04□□□□□ -0.8
ABCF3-215ENST00000481116 HOXD3P31249 432 aaPredicted RBP10.04□□□□□ -0.8
ABCF3-215ENST00000481116 MYCNOSP40205 109 aa10.04□□□□□ -0.8
ABCF3-215ENST00000481116 CDX1P47902 265 aaPredicted RBP10.04□□□□□ -0.8
ABCF3-215ENST00000481116 RAB25P57735 213 aa10.04□□□□□ -0.8
ABCF3-215ENST00000481116 KIAA0141Q14154 515 aaPredicted RBP10.04□□□□□ -0.8
ABCF3-215ENST00000481116 TIMM50Q3ZCQ8 353 aa10.04□□□□□ -0.8
ABCF3-215ENST00000481116 PDPNQ86YL7 162 aa10.04□□□□□ -0.8
ABCF3-215ENST00000481116 GVQW1Q8N7I0 195 aa10.04□□□□□ -0.8
ABCF3-215ENST00000481116 BVESQ8NE79 360 aa10.04□□□□□ -0.8
ABCF3-215ENST00000481116 FLYWCH2Q96CP2 140 aaKnown RBP10.04□□□□□ -0.8
ABCF3-215ENST00000481116 OR5B12Q96R08 314 aa10.04□□□□□ -0.8
ABCF3-215ENST00000481116 RNF5Q99942 180 aa10.04□□□□□ -0.8
ABCF3-215ENST00000481116 DCSTAMPQ9H295 470 aa10.04□□□□□ -0.8
ABCF3-215ENST00000481116 GNB4Q9HAV0 340 aa10.04□□□□□ -0.8
ABCF3-215ENST00000481116 VCX3AQ9NNX9 186 aa10.04□□□□□ -0.8
ABCF3-215ENST00000481116 AURKAIP1Q9NWT8 199 aaPredicted RBP10.04□□□□□ -0.8
ABCF3-215ENST00000481116 ZNF580Q9UK33 172 aa10.04□□□□□ -0.8
ABCF3-215ENST00000481116 SPATA2Q9UM82 520 aa10.04□□□□□ -0.8
ABCF3-215ENST00000481116 ETV7Q9Y603 341 aa10.04□□□□□ -0.8
ABCF3-215ENST00000481116 IGKV1D-13A0A0B4J2D9 117 aa10.03□□□□□ -0.8
ABCF3-215ENST00000481116 A0A1W2PN81 502 aa10.03□□□□□ -0.8
ABCF3-215ENST00000481116 TRIM64CA6NLI5 447 aa10.03□□□□□ -0.8
ABCF3-215ENST00000481116 LINC00473A8K010 186 aa10.03□□□□□ -0.8
ABCF3-215ENST00000481116 IGLV1-40P01703 118 aa10.03□□□□□ -0.8
ABCF3-215ENST00000481116 IGLV2-23P01705 113 aa10.03□□□□□ -0.8
ABCF3-215ENST00000481116 OR5H8P0DN80 308 aa10.03□□□□□ -0.8
ABCF3-215ENST00000481116 IGKV1-13P0DP09 117 aa10.03□□□□□ -0.8
ABCF3-215ENST00000481116 CHRNA7P36544 502 aa10.03□□□□□ -0.8
ABCF3-215ENST00000481116 KRTAP10-11P60412 298 aa10.03□□□□□ -0.8
ABCF3-215ENST00000481116 PITPNAQ00169 270 aa10.03□□□□□ -0.8
ABCF3-215ENST00000481116 PJVKQ0ZLH3 352 aa10.03□□□□□ -0.8
ABCF3-215ENST00000481116 C19orf54Q5BKX5 351 aa10.03□□□□□ -0.8
ABCF3-215ENST00000481116 ZNF660Q6AZW8 331 aaPredicted RBP10.03□□□□□ -0.8
ABCF3-215ENST00000481116 CNIH2Q6PI25 160 aa10.03□□□□□ -0.8
ABCF3-215ENST00000481116 TMEM65Q6PI78 240 aa10.03□□□□□ -0.8
ABCF3-215ENST00000481116 ZNF491Q8N8L2 437 aa10.03□□□□□ -0.8
ABCF3-215ENST00000481116 MINDY2Q8NBR6 621 aa10.03□□□□□ -0.8
ABCF3-215ENST00000481116 RCC1LQ96I51 464 aaKnown RBP10.03□□□□□ -0.8
ABCF3-215ENST00000481116 TSNAXQ99598 290 aaKnown RBP10.03□□□□□ -0.8
ABCF3-215ENST00000481116 NECAP2Q9NVZ3 263 aa10.03□□□□□ -0.8
ABCF3-215ENST00000481116 NUBP2Q9Y5Y2 271 aa10.03□□□□□ -0.8
ABCF3-215ENST00000481116 MEIS3P1A6NDR6 274 aa10.02□□□□□ -0.81
ABCF3-215ENST00000481116 SRRM4A7MD48 611 aaKnown RBP10.02□□□□□ -0.81
ABCF3-215ENST00000481116 ARPC1BO15143 372 aaKnown RBP10.02□□□□□ -0.81
ABCF3-215ENST00000481116 DUTP33316 252 aaKnown RBP10.02□□□□□ -0.81
ABCF3-215ENST00000481116 RAB9AP51151 201 aa10.02□□□□□ -0.81
ABCF3-215ENST00000481116 LUMP51884 338 aaPredicted RBP10.02□□□□□ -0.81
ABCF3-215ENST00000481116 SCAND1P57086 179 aa10.02□□□□□ -0.81
ABCF3-215ENST00000481116 NCS1P62166 190 aa10.02□□□□□ -0.81
ABCF3-215ENST00000481116 UNQ5815/PRO19632Q6UWF5 114 aa10.02□□□□□ -0.81
ABCF3-215ENST00000481116 PPP1R27Q86WC6 154 aa10.02□□□□□ -0.81
ABCF3-215ENST00000481116 LFNGQ8NES3 379 aa10.02□□□□□ -0.81
ABCF3-215ENST00000481116 MRAPQ8TCY5 172 aa10.02□□□□□ -0.81
ABCF3-215ENST00000481116 MYOZ3Q8TDC0 251 aa10.02□□□□□ -0.81
ABCF3-215ENST00000481116 C4orf3Q8WVX3 66 aa10.02□□□□□ -0.81
ABCF3-215ENST00000481116 HARBI1Q96MB7 349 aa10.02□□□□□ -0.81
ABCF3-215ENST00000481116 FUNDC2Q9BWH2 189 aa10.02□□□□□ -0.81
ABCF3-215ENST00000481116 DIABLOQ9NR28 239 aa10.02□□□□□ -0.81
ABCF3-215ENST00000481116 ANXA10Q9UJ72 324 aa10.02□□□□□ -0.81
ABCF3-215ENST00000481116 OR2W1Q9Y3N9 320 aa10.02□□□□□ -0.81
ABCF3-215ENST00000481116 TNCP24821 2201 aa10.01□□□□□ -0.81
ABCF3-215ENST00000481116 SHOXO15266 292 aa10.01□□□□□ -0.81
ABCF3-215ENST00000481116 HLA-DQB1P01920 261 aa10.01□□□□□ -0.81
ABCF3-215ENST00000481116 CRYGBP07316 175 aa10.01□□□□□ -0.81
ABCF3-215ENST00000481116 CTXN2P0C2S0 81 aa10.01□□□□□ -0.81
ABCF3-215ENST00000481116 SLC6A1P30531 599 aa10.01□□□□□ -0.81
ABCF3-215ENST00000481116 CRIP2P52943 208 aaPredicted RBP10.01□□□□□ -0.81
ABCF3-215ENST00000481116 VBP1P61758 197 aa10.01□□□□□ -0.81
ABCF3-215ENST00000481116 GNB1P62873 340 aa10.01□□□□□ -0.81
ABCF3-215ENST00000481116 RPL30P62888 115 aaKnown RBP10.01□□□□□ -0.81
ABCF3-215ENST00000481116 SSBP2P81877 361 aaPredicted RBP10.01□□□□□ -0.81
ABCF3-215ENST00000481116 FXYD3Q14802 87 aa10.01□□□□□ -0.81
ABCF3-215ENST00000481116 ZNF562Q6V9R5 426 aa10.01□□□□□ -0.81
ABCF3-215ENST00000481116 ZNF645Q8N7E2 425 aa10.01□□□□□ -0.81
ABCF3-215ENST00000481116 BEST4Q8NFU0 473 aa10.01□□□□□ -0.81
ABCF3-215ENST00000481116 OR11H1Q8NG94 326 aa10.01□□□□□ -0.81
ABCF3-215ENST00000481116 GRPEL2Q8TAA5 225 aa10.01□□□□□ -0.81
ABCF3-215ENST00000481116 DDB2Q92466 427 aa10.01□□□□□ -0.81
ABCF3-215ENST00000481116 GPHA2Q96T91 129 aa10.01□□□□□ -0.81
ABCF3-215ENST00000481116 NAA50Q9GZZ1 169 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms