RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 ARPC1AQ92747 370 aa11.78□□□□□ -0.52
LIMS3-203ENST00000480744 FAM3DQ96BQ1 224 aa11.78□□□□□ -0.52
LIMS3-203ENST00000480744 TSNAXQ99598 290 aaKnown RBP11.78□□□□□ -0.52
LIMS3-203ENST00000480744 RNF5Q99942 180 aa11.78□□□□□ -0.52
LIMS3-203ENST00000480744 RDH8Q9NYR8 311 aa11.78□□□□□ -0.52
LIMS3-203ENST00000480744 IGKV1-6A0A0C4DH72 117 aa11.77□□□□□ -0.53
LIMS3-203ENST00000480744 TRDCB7Z8K6 153 aa11.77□□□□□ -0.53
LIMS3-203ENST00000480744 M0R1X1 148 aa11.77□□□□□ -0.53
LIMS3-203ENST00000480744 SLC25A17O43808 307 aa11.77□□□□□ -0.53
LIMS3-203ENST00000480744 PROP1O75360 226 aa11.77□□□□□ -0.53
LIMS3-203ENST00000480744 TRGV3P03979 118 aa11.77□□□□□ -0.53
LIMS3-203ENST00000480744 IGKV1-16P04430 117 aa11.77□□□□□ -0.53
LIMS3-203ENST00000480744 TFAP2AP05549 437 aa11.77□□□□□ -0.53
LIMS3-203ENST00000480744 SPNP16150 400 aa11.77□□□□□ -0.53
LIMS3-203ENST00000480744 PITPNAQ00169 270 aa11.77□□□□□ -0.53
LIMS3-203ENST00000480744 C2orf76Q3KRA6 126 aa11.77□□□□□ -0.53
LIMS3-203ENST00000480744 AKIRIN2Q53H80 203 aa11.77□□□□□ -0.53
LIMS3-203ENST00000480744 PLAC9Q5JTB6 97 aa11.77□□□□□ -0.53
LIMS3-203ENST00000480744 ZNF562Q6V9R5 426 aa11.77□□□□□ -0.53
LIMS3-203ENST00000480744 PTX4Q96A99 478 aa11.77□□□□□ -0.53
LIMS3-203ENST00000480744 TPSG1Q9NRR2 321 aa11.77□□□□□ -0.53
LIMS3-203ENST00000480744 ZNF355PQ9NSJ1 428 aa11.77□□□□□ -0.53
LIMS3-203ENST00000480744 RYR3Q15413 4870 aa11.77□□□□□ -0.53
LIMS3-203ENST00000480744 BET1O15155 118 aa11.76□□□□□ -0.53
LIMS3-203ENST00000480744 SPDEFO95238 335 aa11.76□□□□□ -0.53
LIMS3-203ENST00000480744 HSPB1P04792 205 aaKnown RBP11.76□□□□□ -0.53
LIMS3-203ENST00000480744 CD3GP09693 182 aa11.76□□□□□ -0.53
LIMS3-203ENST00000480744 PLA2G7Q13093 441 aa11.76□□□□□ -0.53
LIMS3-203ENST00000480744 FXYD3Q14802 87 aa11.76□□□□□ -0.53
LIMS3-203ENST00000480744 NEDD8Q15843 81 aa11.76□□□□□ -0.53
LIMS3-203ENST00000480744 OVCH2Q7RTZ1 564 aa11.76□□□□□ -0.53
LIMS3-203ENST00000480744 PDPNQ86YL7 162 aa11.76□□□□□ -0.53
LIMS3-203ENST00000480744 OR6Q1Q8NGQ2 317 aa11.76□□□□□ -0.53
LIMS3-203ENST00000480744 FCGR1BQ92637 280 aa11.76□□□□□ -0.53
LIMS3-203ENST00000480744 FLYWCH2Q96CP2 140 aaKnown RBP11.76□□□□□ -0.53
LIMS3-203ENST00000480744 OR4C12Q96R67 309 aa11.76□□□□□ -0.53
LIMS3-203ENST00000480744 SLC35D1Q9NTN3 355 aa11.76□□□□□ -0.53
LIMS3-203ENST00000480744 V9GY05 133 aa11.76□□□□□ -0.53
LIMS3-203ENST00000480744 A0A075B6Q4 140 aa11.75□□□□□ -0.53
LIMS3-203ENST00000480744 TMEM272A0A1B0GTI8 110 aa11.75□□□□□ -0.53
LIMS3-203ENST00000480744 FABP7O15540 132 aa11.75□□□□□ -0.53
LIMS3-203ENST00000480744 CNIH1O95406 144 aa11.75□□□□□ -0.53
LIMS3-203ENST00000480744 OR8U9P0C7N5 309 aa11.75□□□□□ -0.53
LIMS3-203ENST00000480744 GP9P14770 177 aa11.75□□□□□ -0.53
LIMS3-203ENST00000480744 ACSM6Q6P461 480 aa11.75□□□□□ -0.53
LIMS3-203ENST00000480744 OR4A4PQ8NGN8 299 aa11.75□□□□□ -0.53
LIMS3-203ENST00000480744 OR2D2Q9H210 308 aa11.75□□□□□ -0.53
LIMS3-203ENST00000480744 SLA2Q9H6Q3 261 aa11.75□□□□□ -0.53
LIMS3-203ENST00000480744 STAB2Q8WWQ8 2551 aa11.74□□□□□ -0.53
LIMS3-203ENST00000480744 TRDV1A0A1B0GX56 115 aa11.74□□□□□ -0.53
LIMS3-203ENST00000480744 ARPC1BO15143 372 aaKnown RBP11.74□□□□□ -0.53
LIMS3-203ENST00000480744 TNFAIP8O95379 198 aa11.74□□□□□ -0.53
LIMS3-203ENST00000480744 RANBP1P43487 201 aa11.74□□□□□ -0.53
LIMS3-203ENST00000480744 SERPINB10P48595 397 aa11.74□□□□□ -0.53
LIMS3-203ENST00000480744 OR10A3P58181 314 aa11.74□□□□□ -0.53
LIMS3-203ENST00000480744 SRSF7Q16629 238 aaKnown RBP eCLIP11.74□□□□□ -0.53
LIMS3-203ENST00000480744 IGSF11Q5DX21 431 aa11.74□□□□□ -0.53
LIMS3-203ENST00000480744 C22orf42Q6IC83 251 aa11.74□□□□□ -0.53
LIMS3-203ENST00000480744 HAPLN4Q86UW8 402 aa11.74□□□□□ -0.53
LIMS3-203ENST00000480744 NR2C2APQ86WQ0 139 aa11.74□□□□□ -0.53
LIMS3-203ENST00000480744 SBSPONQ8IVN8 264 aa11.74□□□□□ -0.53
LIMS3-203ENST00000480744 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.74□□□□□ -0.53
LIMS3-203ENST00000480744 TSPAN14Q8NG11 270 aa11.74□□□□□ -0.53
LIMS3-203ENST00000480744 OR5T1Q8NG75 326 aa11.74□□□□□ -0.53
LIMS3-203ENST00000480744 MAFIPQ8WZ33 124 aa11.74□□□□□ -0.53
LIMS3-203ENST00000480744 RAB3CQ96E17 227 aa11.74□□□□□ -0.53
LIMS3-203ENST00000480744 RHOVQ96L33 236 aa11.74□□□□□ -0.53
LIMS3-203ENST00000480744 RSRP1Q9BUV0 290 aa11.74□□□□□ -0.53
LIMS3-203ENST00000480744 RAB22AQ9UL26 194 aa11.74□□□□□ -0.53
LIMS3-203ENST00000480744 C13orf42A0A1B0GVH6 325 aa11.73□□□□□ -0.53
LIMS3-203ENST00000480744 TRIM64CA6NLI5 447 aa11.73□□□□□ -0.53
LIMS3-203ENST00000480744 PDCD5O14737 125 aa11.73□□□□□ -0.53
LIMS3-203ENST00000480744 LDLRAD4O15165 306 aa11.73□□□□□ -0.53
LIMS3-203ENST00000480744 FCGR3AP08637 254 aa11.73□□□□□ -0.53
LIMS3-203ENST00000480744 FRMD6-AS1P0C7T7 363 aa11.73□□□□□ -0.53
LIMS3-203ENST00000480744 GSTT2P0CG29 244 aa11.73□□□□□ -0.53
LIMS3-203ENST00000480744 GSTT2BP0CG30 244 aa11.73□□□□□ -0.53
LIMS3-203ENST00000480744 SMIM18P0DKX4 95 aa11.73□□□□□ -0.53
LIMS3-203ENST00000480744 PSMD7P51665 324 aa11.73□□□□□ -0.53
LIMS3-203ENST00000480744 PJVKQ0ZLH3 352 aa11.73□□□□□ -0.53
LIMS3-203ENST00000480744 CBX3Q13185 183 aa11.73□□□□□ -0.53
LIMS3-203ENST00000480744 MOGAT2Q3SYC2 334 aa11.73□□□□□ -0.53
LIMS3-203ENST00000480744 POC5Q8NA72 575 aa11.73□□□□□ -0.53
LIMS3-203ENST00000480744 OR10J5Q8NHC4 309 aa11.73□□□□□ -0.53
LIMS3-203ENST00000480744 HARBI1Q96MB7 349 aa11.73□□□□□ -0.53
LIMS3-203ENST00000480744 RCHY1Q96PM5 261 aa11.73□□□□□ -0.53
LIMS3-203ENST00000480744 ELOVL1Q9BW60 279 aa11.73□□□□□ -0.53
LIMS3-203ENST00000480744 OR51E2Q9H255 320 aa11.73□□□□□ -0.53
LIMS3-203ENST00000480744 RBM7Q9Y580 266 aaKnown RBP11.73□□□□□ -0.53
LIMS3-203ENST00000480744 HUWE1Q7Z6Z7 4374 aaKnown RBP11.72□□□□□ -0.53
LIMS3-203ENST00000480744 SMIM30A4D0T7 59 aa11.72□□□□□ -0.53
LIMS3-203ENST00000480744 ANKRD34BA5PLL1 514 aa11.72□□□□□ -0.53
LIMS3-203ENST00000480744 GNB3P16520 340 aa11.72□□□□□ -0.53
LIMS3-203ENST00000480744 GADD45AP24522 165 aa11.72□□□□□ -0.53
LIMS3-203ENST00000480744 DEFA5Q01523 94 aa11.72□□□□□ -0.53
LIMS3-203ENST00000480744 BVESQ8NE79 360 aa11.72□□□□□ -0.53
LIMS3-203ENST00000480744 OR10R2Q8NGX6 335 aa11.72□□□□□ -0.53
LIMS3-203ENST00000480744 CABLES2Q9BTV7 478 aa11.72□□□□□ -0.53
LIMS3-203ENST00000480744 RNF167Q9H6Y7 350 aa11.72□□□□□ -0.53
LIMS3-203ENST00000480744 TXNL4BQ9NX01 149 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms