RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 C8orf4Q9NR00 106 aa1.07□□□□□ -2.24
CALD1-219ENST00000480638 MS4A12Q9NXJ0 267 aa1.07□□□□□ -2.24
CALD1-219ENST00000480638 SOX21Q9Y651 276 aaPredicted RBP1.07□□□□□ -2.24
CALD1-219ENST00000480638 RTTNQ86VV8 2226 aa1.07□□□□□ -2.24
CALD1-219ENST00000480638 NUMA1Q14980 2115 aa1.06□□□□□ -2.24
CALD1-219ENST00000480638 NBEAL2Q6ZNJ1 2754 aa1.06□□□□□ -2.24
CALD1-219ENST00000480638 ANKHD1Q8IWZ3 2542 aaKnown RBP1.06□□□□□ -2.24
CALD1-219ENST00000480638 SYNGR1O43759 233 aa1.06□□□□□ -2.24
CALD1-219ENST00000480638 ZNF737O75373 536 aa1.06□□□□□ -2.24
CALD1-219ENST00000480638 BPGMP07738 259 aa1.06□□□□□ -2.24
CALD1-219ENST00000480638 OR10J1P30954 320 aa1.06□□□□□ -2.24
CALD1-219ENST00000480638 CA7P43166 264 aa1.06□□□□□ -2.24
CALD1-219ENST00000480638 STC1P52823 247 aa1.06□□□□□ -2.24
CALD1-219ENST00000480638 DLX6P56179 175 aa1.06□□□□□ -2.24
CALD1-219ENST00000480638 TAS2R30P59541 319 aa1.06□□□□□ -2.24
CALD1-219ENST00000480638 DAD1P61803 113 aa1.06□□□□□ -2.24
CALD1-219ENST00000480638 SPATA31B1PQ5VZV4 182 aa1.06□□□□□ -2.24
CALD1-219ENST00000480638 OR10K2Q6IF99 312 aa1.06□□□□□ -2.24
CALD1-219ENST00000480638 SCGB1D4Q6XE38 83 aa1.06□□□□□ -2.24
CALD1-219ENST00000480638 SLC13A5Q86YT5 568 aaPredicted RBP1.06□□□□□ -2.24
CALD1-219ENST00000480638 RPS4Y2Q8TD47 263 aa1.06□□□□□ -2.24
CALD1-219ENST00000480638 SMCR5Q8TEV8 140 aa1.06□□□□□ -2.24
CALD1-219ENST00000480638 ASB17Q8WXJ9 295 aa1.06□□□□□ -2.24
CALD1-219ENST00000480638 OR7D2Q96RA2 312 aa1.06□□□□□ -2.24
CALD1-219ENST00000480638 CYTH2Q99418 400 aa1.06□□□□□ -2.24
CALD1-219ENST00000480638 EIF5A2Q9GZV4 153 aaKnown RBP1.06□□□□□ -2.24
CALD1-219ENST00000480638 STAB1Q9NY15 2570 aa1.05□□□□□ -2.24
CALD1-219ENST00000480638 REV3LO60673 3130 aa1.05□□□□□ -2.24
CALD1-219ENST00000480638 KDM6BO15054 1643 aa1.05□□□□□ -2.24
CALD1-219ENST00000480638 CCDC168Q8NDH2 2452 aa1.05□□□□□ -2.24
CALD1-219ENST00000480638 IGHV3-64A0A075B6Q5 118 aa1.05□□□□□ -2.24
CALD1-219ENST00000480638 GSTZ1O43708 216 aaPredicted RBP1.05□□□□□ -2.24
CALD1-219ENST00000480638 PGLYRP1O75594 196 aaPredicted RBP1.05□□□□□ -2.24
CALD1-219ENST00000480638 HBZP02008 142 aa1.05□□□□□ -2.24
CALD1-219ENST00000480638 TMEM258P61165 79 aa1.05□□□□□ -2.24
CALD1-219ENST00000480638 HERVK_113P63121 156 aa1.05□□□□□ -2.24
CALD1-219ENST00000480638 NATD1Q8N6N6 113 aa1.05□□□□□ -2.24
CALD1-219ENST00000480638 RNASEH2CQ8TDP1 164 aaKnown RBP1.05□□□□□ -2.24
CALD1-219ENST00000480638 CYGBQ8WWM9 190 aa1.05□□□□□ -2.24
CALD1-219ENST00000480638 SMIM12Q96EX1 92 aa1.05□□□□□ -2.24
CALD1-219ENST00000480638 Q96M85 177 aa1.05□□□□□ -2.24
CALD1-219ENST00000480638 ANGPT4Q9Y264 503 aa1.05□□□□□ -2.24
CALD1-219ENST00000480638 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.05□□□□□ -2.24
CALD1-219ENST00000480638 DNHD1Q96M86 4753 aa1.05□□□□□ -2.24
CALD1-219ENST00000480638 IGSF10Q6WRI0 2623 aa1.05□□□□□ -2.24
CALD1-219ENST00000480638 CFAP47Q6ZTR5 3102 aa1.05□□□□□ -2.24
CALD1-219ENST00000480638 MUC2Q02817 5179 aa1.05□□□□□ -2.24
CALD1-219ENST00000480638 NPATQ14207 1427 aa1.05□□□□□ -2.24
CALD1-219ENST00000480638 CELSR3Q9NYQ7 3312 aa1.05□□□□□ -2.24
CALD1-219ENST00000480638 CEP295Q9C0D2 2601 aa1.04□□□□□ -2.24
CALD1-219ENST00000480638 PDE4DIPQ5VU43 2346 aa1.04□□□□□ -2.24
CALD1-219ENST00000480638 NCOR2Q9Y618 2525 aa1.04□□□□□ -2.24
CALD1-219ENST00000480638 TRBV6-5A0A0K0K1A5 114 aa1.04□□□□□ -2.24
CALD1-219ENST00000480638 LOC100506127A0A0U1RQW1 187 aa1.04□□□□□ -2.24
CALD1-219ENST00000480638 BHLHE40O14503 412 aa1.04□□□□□ -2.24
CALD1-219ENST00000480638 MRASO14807 208 aa1.04□□□□□ -2.24
CALD1-219ENST00000480638 NDUFB2O95178 105 aa1.04□□□□□ -2.24
CALD1-219ENST00000480638 S100A9P06702 114 aaKnown RBP1.04□□□□□ -2.24
CALD1-219ENST00000480638 SYT1P21579 422 aa1.04□□□□□ -2.24
CALD1-219ENST00000480638 PRB3Q04118 309 aaPredicted RBP1.04□□□□□ -2.24
CALD1-219ENST00000480638 Q3ZCU0 254 aa1.04□□□□□ -2.24
CALD1-219ENST00000480638 TMEM155Q4W5P6 130 aa1.04□□□□□ -2.24
CALD1-219ENST00000480638 UNQ6190/PRO20217Q6UXQ8 127 aa1.04□□□□□ -2.24
CALD1-219ENST00000480638 SPATA12Q7Z6I5 190 aa1.04□□□□□ -2.24
CALD1-219ENST00000480638 VCX3BQ9H321 246 aa1.04□□□□□ -2.24
CALD1-219ENST00000480638 AGPAT3Q9NRZ7 376 aa1.04□□□□□ -2.24
CALD1-219ENST00000480638 COL6A5A8TX70 2615 aa1.04□□□□□ -2.24
CALD1-219ENST00000480638 FLNCQ14315 2725 aa1.04□□□□□ -2.24
CALD1-219ENST00000480638 NAV3Q8IVL0 2385 aa1.04□□□□□ -2.24
CALD1-219ENST00000480638 EYSQ5T1H1 3165 aa1.04□□□□□ -2.24
CALD1-219ENST00000480638 ZFHX3Q15911 3703 aa1.03□□□□□ -2.24
CALD1-219ENST00000480638 IGKV2-40A0A087WW87 121 aaPredicted RBP1.03□□□□□ -2.24
CALD1-219ENST00000480638 IGKV3D-7A0A0C4DH55 119 aa1.03□□□□□ -2.24
CALD1-219ENST00000480638 IGKV3OR2-268A0A0C4DH90 116 aa1.03□□□□□ -2.24
CALD1-219ENST00000480638 GOLGA8QA0A0J9YX86 632 aa1.03□□□□□ -2.24
CALD1-219ENST00000480638 BRI3O95415 125 aa1.03□□□□□ -2.24
CALD1-219ENST00000480638 IGKV2D-40P01614 121 aaPredicted RBP1.03□□□□□ -2.24
CALD1-219ENST00000480638 RBM11P57052 281 aaKnown RBP1.03□□□□□ -2.24
CALD1-219ENST00000480638 COPS6Q7L5N1 327 aa1.03□□□□□ -2.24
CALD1-219ENST00000480638 ATP5L2Q7Z4Y8 100 aa1.03□□□□□ -2.24
CALD1-219ENST00000480638 DAND5Q8N907 189 aa1.03□□□□□ -2.24
CALD1-219ENST00000480638 STK38LQ9Y2H1 464 aa1.03□□□□□ -2.24
CALD1-219ENST00000480638 TENM4Q6N022 2769 aa1.03□□□□□ -2.24
CALD1-219ENST00000480638 RIMBP3CA6NJZ7 1639 aa1.03□□□□□ -2.24
CALD1-219ENST00000480638 RIMBP3BA6NNM3 1639 aa1.03□□□□□ -2.24
CALD1-219ENST00000480638 RIMBP3Q9UFD9 1639 aa1.03□□□□□ -2.24
CALD1-219ENST00000480638 UNC80Q8N2C7 3258 aa1.03□□□□□ -2.24
CALD1-219ENST00000480638 TTC28Q96AY4 2481 aa1.03□□□□□ -2.25
CALD1-219ENST00000480638 USP9YO00507 2555 aaPredicted RBP1.02□□□□□ -2.25
CALD1-219ENST00000480638 PDZD2O15018 2839 aa1.02□□□□□ -2.25
CALD1-219ENST00000480638 PVALBP20472 110 aaPredicted RBP1.02□□□□□ -2.25
CALD1-219ENST00000480638 PTPRBP23467 1997 aa1.02□□□□□ -2.25
CALD1-219ENST00000480638 CRATP43155 626 aa1.02□□□□□ -2.25
CALD1-219ENST00000480638 MKI67P46013 3256 aaKnown RBP1.02□□□□□ -2.25
CALD1-219ENST00000480638 UTRNP46939 3433 aa1.02□□□□□ -2.25
CALD1-219ENST00000480638 CTBP2P56545 445 aa1.02□□□□□ -2.25
CALD1-219ENST00000480638 TMEM267Q0VDI3 215 aaPredicted RBP1.02□□□□□ -2.25
CALD1-219ENST00000480638 SYCP1Q15431 976 aa1.02□□□□□ -2.25
CALD1-219ENST00000480638 MAP3K19Q56UN5 1328 aa1.02□□□□□ -2.25
CALD1-219ENST00000480638 TMEM42Q69YG0 159 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms