RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 LDLRAD2Q5SZI1 272 aa14.25□□□□□ -0.13
UPF3A-206ENST00000480362 TGIF2LXQ8IUE1 241 aa14.25□□□□□ -0.13
UPF3A-206ENST00000480362 SPAG16Q8N0X2 631 aa14.25□□□□□ -0.13
UPF3A-206ENST00000480362 LGI3Q8N145 548 aa14.25□□□□□ -0.13
UPF3A-206ENST00000480362 TCTEX1D1Q8N7M0 179 aa14.25□□□□□ -0.13
UPF3A-206ENST00000480362 CHAC2Q8WUX2 184 aa14.25□□□□□ -0.13
UPF3A-206ENST00000480362 ADTRPQ96IZ2 230 aa14.25□□□□□ -0.13
UPF3A-206ENST00000480362 MRPL20Q9BYC9 149 aaKnown RBP14.25□□□□□ -0.13
UPF3A-206ENST00000480362 DPM3Q9P2X0 92 aa14.25□□□□□ -0.13
UPF3A-206ENST00000480362 PRELID3BQ9Y3B1 194 aa14.25□□□□□ -0.13
UPF3A-206ENST00000480362 CSMD2Q7Z408 3487 aa14.24□□□□□ -0.13
UPF3A-206ENST00000480362 FLNBO75369 2602 aaKnown RBP14.24□□□□□ -0.13
UPF3A-206ENST00000480362 DBX1A6NMT0 343 aa14.24□□□□□ -0.13
UPF3A-206ENST00000480362 A8MV72 311 aaPredicted RBP14.24□□□□□ -0.13
UPF3A-206ENST00000480362 J3QLI3 93 aa14.24□□□□□ -0.13
UPF3A-206ENST00000480362 CDS2O95674 445 aa14.24□□□□□ -0.13
UPF3A-206ENST00000480362 SERPINE2P07093 398 aa14.24□□□□□ -0.13
UPF3A-206ENST00000480362 SULT1A3P0DMM9 295 aa14.24□□□□□ -0.13
UPF3A-206ENST00000480362 SULT1A4P0DMN0 295 aa14.24□□□□□ -0.13
UPF3A-206ENST00000480362 CEACAM3P40198 252 aa14.24□□□□□ -0.13
UPF3A-206ENST00000480362 LPAR6P43657 344 aa14.24□□□□□ -0.13
UPF3A-206ENST00000480362 SRPXP78539 464 aa14.24□□□□□ -0.13
UPF3A-206ENST00000480362 TPTE2P1Q5T6R2 138 aa14.24□□□□□ -0.13
UPF3A-206ENST00000480362 LHFPL4Q7Z7J7 247 aa14.24□□□□□ -0.13
UPF3A-206ENST00000480362 SELENOHQ8IZQ5 122 aaKnown RBP14.24□□□□□ -0.13
UPF3A-206ENST00000480362 LRTM2Q8N967 370 aa14.24□□□□□ -0.13
UPF3A-206ENST00000480362 LHFPL5Q8TAF8 219 aa14.24□□□□□ -0.13
UPF3A-206ENST00000480362 DDB2Q92466 427 aa14.24□□□□□ -0.13
UPF3A-206ENST00000480362 RPEQ96AT9 228 aa14.24□□□□□ -0.13
UPF3A-206ENST00000480362 TMEM56Q96MV1 263 aa14.24□□□□□ -0.13
UPF3A-206ENST00000480362 NABP2Q9BQ15 211 aa14.24□□□□□ -0.13
UPF3A-206ENST00000480362 MGAT4CQ9UBM8 478 aa14.24□□□□□ -0.13
UPF3A-206ENST00000480362 TMEM56-RWDD3S4R434 201 aa14.24□□□□□ -0.13
UPF3A-206ENST00000480362 IGHV3OR16-10A0A075B7F0 116 aa14.23□□□□□ -0.13
UPF3A-206ENST00000480362 RAMP3O60896 148 aa14.23□□□□□ -0.13
UPF3A-206ENST00000480362 FCGR3BO75015 233 aa14.23□□□□□ -0.13
UPF3A-206ENST00000480362 AVPP01185 164 aa14.23□□□□□ -0.13
UPF3A-206ENST00000480362 MINOS1Q5TGZ0 78 aa14.23□□□□□ -0.13
UPF3A-206ENST00000480362 TMEM268Q5VZI3 342 aa14.23□□□□□ -0.13
UPF3A-206ENST00000480362 ZNF695Q8IW36 515 aa14.23□□□□□ -0.13
UPF3A-206ENST00000480362 OR11H7Q8NGC8 314 aa14.23□□□□□ -0.13
UPF3A-206ENST00000480362 C18orf12Q96KH6 178 aa14.23□□□□□ -0.13
UPF3A-206ENST00000480362 FAM212BQ9NTI7 297 aaPredicted RBP14.23□□□□□ -0.13
UPF3A-206ENST00000480362 TBL2Q9Y4P3 447 aaKnown RBP14.23□□□□□ -0.13
UPF3A-206ENST00000480362 MINOS1-NBL1R4GNA1 71 aa14.23□□□□□ -0.13
UPF3A-206ENST00000480362 IGHV1-69DA0A0B4J2H0 117 aa14.22□□□□□ -0.13
UPF3A-206ENST00000480362 GOSR2O14653 212 aa14.22□□□□□ -0.13
UPF3A-206ENST00000480362 NPFFO15130 113 aa14.22□□□□□ -0.13
UPF3A-206ENST00000480362 ADAP1O75689 374 aa14.22□□□□□ -0.13
UPF3A-206ENST00000480362 IGHV1-69P01742 117 aa14.22□□□□□ -0.13
UPF3A-206ENST00000480362 HOXB5P09067 269 aa14.22□□□□□ -0.13
UPF3A-206ENST00000480362 TRAPPC2P0DI81 140 aa14.22□□□□□ -0.13
UPF3A-206ENST00000480362 TRAPPC2BP0DI82 140 aa14.22□□□□□ -0.13
UPF3A-206ENST00000480362 CXCL3P19876 107 aa14.22□□□□□ -0.13
UPF3A-206ENST00000480362 EPHA1P21709 976 aa14.22□□□□□ -0.13
UPF3A-206ENST00000480362 KIR2DS2P43631 304 aa14.22□□□□□ -0.13
UPF3A-206ENST00000480362 ZNF816Q0VGE8 651 aaPredicted RBP14.22□□□□□ -0.13
UPF3A-206ENST00000480362 LYZL2Q7Z4W2 148 aa14.22□□□□□ -0.13
UPF3A-206ENST00000480362 MOB3BQ86TA1 216 aa14.22□□□□□ -0.13
UPF3A-206ENST00000480362 CD300LFQ8TDQ1 290 aa14.22□□□□□ -0.13
UPF3A-206ENST00000480362 IL22RA2Q969J5 263 aa14.22□□□□□ -0.13
UPF3A-206ENST00000480362 SLC35D1Q9NTN3 355 aa14.22□□□□□ -0.13
UPF3A-206ENST00000480362 HILPDAQ9Y5L2 63 aa14.22□□□□□ -0.13
UPF3A-206ENST00000480362 WNK2Q9Y3S1 2297 aa14.21□□□□□ -0.13
UPF3A-206ENST00000480362 TRAV40A0A0B4J280 105 aa14.21□□□□□ -0.13
UPF3A-206ENST00000480362 IGHV1-3A0A0C4DH29 117 aa14.21□□□□□ -0.13
UPF3A-206ENST00000480362 CCSO14618 274 aa14.21□□□□□ -0.13
UPF3A-206ENST00000480362 TXNL1O43396 289 aa14.21□□□□□ -0.13
UPF3A-206ENST00000480362 SIX6O95475 246 aa14.21□□□□□ -0.13
UPF3A-206ENST00000480362 IGKV1-39P01597 117 aa14.21□□□□□ -0.13
UPF3A-206ENST00000480362 IGKV1D-39P04432 117 aa14.21□□□□□ -0.13
UPF3A-206ENST00000480362 RPA2P15927 270 aa14.21□□□□□ -0.13
UPF3A-206ENST00000480362 HLA-GP17693 338 aa14.21□□□□□ -0.13
UPF3A-206ENST00000480362 MIDNQ504T8 468 aa14.21□□□□□ -0.13
UPF3A-206ENST00000480362 GPR157Q5UAW9 335 aa14.21□□□□□ -0.13
UPF3A-206ENST00000480362 SLC35G3Q8N808 338 aa14.21□□□□□ -0.13
UPF3A-206ENST00000480362 OR5AN1Q8NGI8 311 aa14.21□□□□□ -0.13
UPF3A-206ENST00000480362 C17orf50Q8WW18 174 aa14.21□□□□□ -0.13
UPF3A-206ENST00000480362 RBPMSQ93062 196 aaKnown RBP14.21□□□□□ -0.13
UPF3A-206ENST00000480362 RAB18Q9NP72 206 aa14.21□□□□□ -0.13
UPF3A-206ENST00000480362 H0YJW9 148 aa14.2□□□□□ -0.14
UPF3A-206ENST00000480362 RBFOX2O43251 390 aaKnown RBP eCLIP14.2□□□□□ -0.14
UPF3A-206ENST00000480362 APOA2P02652 100 aa14.2□□□□□ -0.14
UPF3A-206ENST00000480362 IGHV4-38-2P0DP08 117 aa14.2□□□□□ -0.14
UPF3A-206ENST00000480362 SAA4P35542 130 aa14.2□□□□□ -0.14
UPF3A-206ENST00000480362 TAGLNQ01995 201 aaKnown RBP14.2□□□□□ -0.14
UPF3A-206ENST00000480362 SSX2Q16385 188 aa14.2□□□□□ -0.14
UPF3A-206ENST00000480362 RUSC1-AS1Q66K80 236 aa14.2□□□□□ -0.14
UPF3A-206ENST00000480362 DYNAPQ8N1N2 210 aa14.2□□□□□ -0.14
UPF3A-206ENST00000480362 PIP4P2Q8N4L2 257 aa14.2□□□□□ -0.14
UPF3A-206ENST00000480362 OR4S2Q8NH73 311 aa14.2□□□□□ -0.14
UPF3A-206ENST00000480362 RBMXL1Q96E39 390 aaKnown RBP14.2□□□□□ -0.14
UPF3A-206ENST00000480362 C13orf42A0A1B0GVH6 325 aa14.19□□□□□ -0.14
UPF3A-206ENST00000480362 A0A1W2PPI3 338 aa14.19□□□□□ -0.14
UPF3A-206ENST00000480362 FAM25EA8MYX2 175 aa14.19□□□□□ -0.14
UPF3A-206ENST00000480362 OOSP1A8MZH6 123 aa14.19□□□□□ -0.14
UPF3A-206ENST00000480362 H7C2Y5 167 aa14.19□□□□□ -0.14
UPF3A-206ENST00000480362 CCNKO75909 580 aa14.19□□□□□ -0.14
UPF3A-206ENST00000480362 S1PR2O95136 353 aa14.19□□□□□ -0.14
UPF3A-206ENST00000480362 HPRT1P00492 218 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms