RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 LRTM2Q8N967 370 aa13.62□□□□□ -0.23
SCAMP3-207ENST00000480219 ZNF383Q8NA42 475 aa13.62□□□□□ -0.23
SCAMP3-207ENST00000480219 OR5AN1Q8NGI8 311 aa13.62□□□□□ -0.23
SCAMP3-207ENST00000480219 ZNF431Q8TF32 576 aaPredicted RBP13.62□□□□□ -0.23
SCAMP3-207ENST00000480219 GLYATL2Q8WU03 294 aa13.62□□□□□ -0.23
SCAMP3-207ENST00000480219 MITD1Q8WV92 249 aa13.62□□□□□ -0.23
SCAMP3-207ENST00000480219 MALSU1Q96EH3 234 aa13.62□□□□□ -0.23
SCAMP3-207ENST00000480219 TP53RKQ96S44 253 aa13.62□□□□□ -0.23
SCAMP3-207ENST00000480219 GPN1Q9HCN4 374 aaPredicted RBP13.62□□□□□ -0.23
SCAMP3-207ENST00000480219 KCNIP3Q9Y2W7 256 aa13.62□□□□□ -0.23
SCAMP3-207ENST00000480219 A0A0A6YYJ9 748 aa13.61□□□□□ -0.23
SCAMP3-207ENST00000480219 TRAV40A0A0B4J280 105 aa13.61□□□□□ -0.23
SCAMP3-207ENST00000480219 TEX13DA0A0J9YY54 714 aaPredicted RBP13.61□□□□□ -0.23
SCAMP3-207ENST00000480219 A0A1W2PPI3 338 aa13.61□□□□□ -0.23
SCAMP3-207ENST00000480219 TNFSF12O43508 249 aa13.61□□□□□ -0.23
SCAMP3-207ENST00000480219 HLA-AP01891 365 aaKnown RBP13.61□□□□□ -0.23
SCAMP3-207ENST00000480219 IGHV4-38-2P0DP08 117 aa13.61□□□□□ -0.23
SCAMP3-207ENST00000480219 ANXA3P12429 323 aa13.61□□□□□ -0.23
SCAMP3-207ENST00000480219 SAA4P35542 130 aa13.61□□□□□ -0.23
SCAMP3-207ENST00000480219 KIR2DS2P43631 304 aa13.61□□□□□ -0.23
SCAMP3-207ENST00000480219 DIAPH2-AS1Q14236 149 aa13.61□□□□□ -0.23
SCAMP3-207ENST00000480219 C4orf46Q504U0 113 aa13.61□□□□□ -0.23
SCAMP3-207ENST00000480219 C9orf139Q6ZV77 190 aa13.61□□□□□ -0.23
SCAMP3-207ENST00000480219 LHFPL4Q7Z7J7 247 aa13.61□□□□□ -0.23
SCAMP3-207ENST00000480219 CD300LFQ8TDQ1 290 aa13.61□□□□□ -0.23
SCAMP3-207ENST00000480219 TMEM56Q96MV1 263 aa13.61□□□□□ -0.23
SCAMP3-207ENST00000480219 GPHA2Q96T91 129 aa13.61□□□□□ -0.23
SCAMP3-207ENST00000480219 SEC22CQ9BRL7 303 aa13.61□□□□□ -0.23
SCAMP3-207ENST00000480219 BEX2Q9BXY8 128 aa13.61□□□□□ -0.23
SCAMP3-207ENST00000480219 MRPL20Q9BYC9 149 aaKnown RBP13.61□□□□□ -0.23
SCAMP3-207ENST00000480219 TMEM222Q9H0R3 208 aa13.61□□□□□ -0.23
SCAMP3-207ENST00000480219 BEX1Q9HBH7 125 aa13.61□□□□□ -0.23
SCAMP3-207ENST00000480219 TMEM160Q9NX00 188 aa13.61□□□□□ -0.23
SCAMP3-207ENST00000480219 ALG5Q9Y673 324 aa13.61□□□□□ -0.23
SCAMP3-207ENST00000480219 TMEM56-RWDD3S4R434 201 aa13.61□□□□□ -0.23
SCAMP3-207ENST00000480219 CELSR1Q9NYQ6 3014 aa13.61□□□□□ -0.23
SCAMP3-207ENST00000480219 IGHV1-3A0A0C4DH29 117 aa13.6□□□□□ -0.23
SCAMP3-207ENST00000480219 DBX1A6NMT0 343 aa13.6□□□□□ -0.23
SCAMP3-207ENST00000480219 CREBL2O60519 120 aaPredicted RBP13.6□□□□□ -0.23
SCAMP3-207ENST00000480219 CDS2O95674 445 aa13.6□□□□□ -0.23
SCAMP3-207ENST00000480219 IFNA2P01563 188 aa13.6□□□□□ -0.23
SCAMP3-207ENST00000480219 OR5AC1P0C628 307 aa13.6□□□□□ -0.23
SCAMP3-207ENST00000480219 RPA2P15927 270 aa13.6□□□□□ -0.23
SCAMP3-207ENST00000480219 EPHA1P21709 976 aa13.6□□□□□ -0.23
SCAMP3-207ENST00000480219 LGALS4P56470 323 aa13.6□□□□□ -0.23
SCAMP3-207ENST00000480219 TUSC1Q2TAM9 212 aa13.6□□□□□ -0.23
SCAMP3-207ENST00000480219 ZNF585BQ52M93 769 aa13.6□□□□□ -0.23
SCAMP3-207ENST00000480219 CCDC144NLQ6NUI1 221 aa13.6□□□□□ -0.23
SCAMP3-207ENST00000480219 CFHR4Q92496 578 aa13.6□□□□□ -0.23
SCAMP3-207ENST00000480219 IL22RA2Q969J5 263 aa13.6□□□□□ -0.23
SCAMP3-207ENST00000480219 RPEQ96AT9 228 aa13.6□□□□□ -0.23
SCAMP3-207ENST00000480219 ANK3Q12955 4377 aaKnown RBP13.6□□□□□ -0.23
SCAMP3-207ENST00000480219 PIGBOS1A0A0B4J2F0 54 aa13.59□□□□□ -0.23
SCAMP3-207ENST00000480219 H0YJW9 148 aa13.59□□□□□ -0.23
SCAMP3-207ENST00000480219 RRASP10301 218 aa13.59□□□□□ -0.23
SCAMP3-207ENST00000480219 VAMP1P23763 118 aa13.59□□□□□ -0.23
SCAMP3-207ENST00000480219 LINC00205P59089 165 aa13.59□□□□□ -0.23
SCAMP3-207ENST00000480219 SRPXP78539 464 aa13.59□□□□□ -0.23
SCAMP3-207ENST00000480219 ANKRD55Q3KP44 614 aa13.59□□□□□ -0.23
SCAMP3-207ENST00000480219 DHRS7BQ6IAN0 325 aaPredicted RBP13.59□□□□□ -0.23
SCAMP3-207ENST00000480219 LIAT1Q6ZQX7 453 aa13.59□□□□□ -0.23
SCAMP3-207ENST00000480219 PDZD9Q8IXQ8 264 aa13.59□□□□□ -0.23
SCAMP3-207ENST00000480219 CADM3Q8N126 398 aa13.59□□□□□ -0.23
SCAMP3-207ENST00000480219 OR52B4Q8NGK2 314 aa13.59□□□□□ -0.23
SCAMP3-207ENST00000480219 OR51H1Q8NH63 302 aa13.59□□□□□ -0.23
SCAMP3-207ENST00000480219 TCTEX1D2Q8WW35 142 aa13.59□□□□□ -0.23
SCAMP3-207ENST00000480219 MEGF9Q9H1U4 602 aa13.59□□□□□ -0.23
SCAMP3-207ENST00000480219 OR51J1Q9H342 316 aa13.59□□□□□ -0.23
SCAMP3-207ENST00000480219 PRELID3BQ9Y3B1 194 aa13.59□□□□□ -0.23
SCAMP3-207ENST00000480219 FAM90A9PA6NNJ1 464 aa13.58□□□□□ -0.24
SCAMP3-207ENST00000480219 HLA-GP17693 338 aa13.58□□□□□ -0.24
SCAMP3-207ENST00000480219 MC5RP33032 325 aa13.58□□□□□ -0.24
SCAMP3-207ENST00000480219 DYNLT3P51808 116 aa13.58□□□□□ -0.24
SCAMP3-207ENST00000480219 SPAG16Q8N0X2 631 aa13.58□□□□□ -0.24
SCAMP3-207ENST00000480219 DYNAPQ8N1N2 210 aa13.58□□□□□ -0.24
SCAMP3-207ENST00000480219 DRAXINQ8NBI3 349 aaPredicted RBP13.58□□□□□ -0.24
SCAMP3-207ENST00000480219 NANPQ8TBE9 248 aa13.58□□□□□ -0.24
SCAMP3-207ENST00000480219 CHAC2Q8WUX2 184 aa13.58□□□□□ -0.24
SCAMP3-207ENST00000480219 NUP50Q9UKX7 468 aa13.58□□□□□ -0.24
SCAMP3-207ENST00000480219 DUXBA0A1W2PPF3 345 aa13.57□□□□□ -0.24
SCAMP3-207ENST00000480219 A0A1W2PRD5 423 aa13.57□□□□□ -0.24
SCAMP3-207ENST00000480219 A0A1W2PRF3 423 aa13.57□□□□□ -0.24
SCAMP3-207ENST00000480219 A0A1W2PRM7 423 aa13.57□□□□□ -0.24
SCAMP3-207ENST00000480219 VGLL3A8MV65 326 aa13.57□□□□□ -0.24
SCAMP3-207ENST00000480219 IGKV1-39P01597 117 aa13.57□□□□□ -0.24
SCAMP3-207ENST00000480219 IGKV1D-39P04432 117 aa13.57□□□□□ -0.24
SCAMP3-207ENST00000480219 CD1BP29016 333 aa13.57□□□□□ -0.24
SCAMP3-207ENST00000480219 REG1BP48304 166 aa13.57□□□□□ -0.24
SCAMP3-207ENST00000480219 RAB13P51153 203 aa13.57□□□□□ -0.24
SCAMP3-207ENST00000480219 SLC9A3R2Q15599 337 aa13.57□□□□□ -0.24
SCAMP3-207ENST00000480219 POU2AF1Q16633 256 aa13.57□□□□□ -0.24
SCAMP3-207ENST00000480219 SP6Q3SY56 376 aa13.57□□□□□ -0.24
SCAMP3-207ENST00000480219 PDPNQ86YL7 162 aa13.57□□□□□ -0.24
SCAMP3-207ENST00000480219 C12orf45Q8N5I9 185 aaPredicted RBP13.57□□□□□ -0.24
SCAMP3-207ENST00000480219 OR4S2Q8NH73 311 aa13.57□□□□□ -0.24
SCAMP3-207ENST00000480219 COQ8AQ8NI60 647 aa13.57□□□□□ -0.24
SCAMP3-207ENST00000480219 LHFPL5Q8TAF8 219 aa13.57□□□□□ -0.24
SCAMP3-207ENST00000480219 C17orf50Q8WW18 174 aa13.57□□□□□ -0.24
SCAMP3-207ENST00000480219 PHB2Q99623 299 aa13.57□□□□□ -0.24
SCAMP3-207ENST00000480219 PLEKHA2Q9HB19 425 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms