RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 GCGP01275 180 aa12.27□□□□□ -0.44
COL20A1-206ENST00000479501 ZNF708P17019 499 aa12.27□□□□□ -0.44
COL20A1-206ENST00000479501 POC1AQ8NBT0 407 aa12.27□□□□□ -0.44
COL20A1-206ENST00000479501 TIMM9Q9Y5J7 89 aa12.27□□□□□ -0.44
COL20A1-206ENST00000479501 KCNMB2Q9Y691 235 aa12.27□□□□□ -0.44
COL20A1-206ENST00000479501 A0A1B0GV90 55 aa12.27□□□□□ -0.45
COL20A1-206ENST00000479501 SLC25A5P05141 298 aaKnown RBP12.27□□□□□ -0.45
COL20A1-206ENST00000479501 ZNF665Q9H7R5 613 aa12.27□□□□□ -0.45
COL20A1-206ENST00000479501 GSN-AS1Q9NRJ2 163 aa12.27□□□□□ -0.45
COL20A1-206ENST00000479501 ESPL1Q14674 2120 aa12.27□□□□□ -0.45
COL20A1-206ENST00000479501 DIRC3C9JPN6 131 aa12.27□□□□□ -0.45
COL20A1-206ENST00000479501 MGST3O14880 152 aa12.27□□□□□ -0.45
COL20A1-206ENST00000479501 PITX3O75364 302 aa12.27□□□□□ -0.45
COL20A1-206ENST00000479501 SERF2P84101 59 aa12.27□□□□□ -0.45
COL20A1-206ENST00000479501 OR52L2PQ8NGH6 319 aa12.27□□□□□ -0.45
COL20A1-206ENST00000479501 WDR61Q9GZS3 305 aaKnown RBP12.27□□□□□ -0.45
COL20A1-206ENST00000479501 DEPPQ9NTK1 212 aa12.27□□□□□ -0.45
COL20A1-206ENST00000479501 AKAP6Q13023 2319 aa12.27□□□□□ -0.45
COL20A1-206ENST00000479501 PDE6DO43924 150 aa12.27□□□□□ -0.45
COL20A1-206ENST00000479501 CD99P14209 185 aa12.27□□□□□ -0.45
COL20A1-206ENST00000479501 CCL1P22362 96 aa12.27□□□□□ -0.45
COL20A1-206ENST00000479501 OR1L6Q8NGR2 347 aa12.27□□□□□ -0.45
COL20A1-206ENST00000479501 GP6Q9HCN6 339 aa12.27□□□□□ -0.45
COL20A1-206ENST00000479501 TMEM187Q14656 261 aa12.26□□□□□ -0.45
COL20A1-206ENST00000479501 OR52M1Q8NGK5 317 aa12.26□□□□□ -0.45
COL20A1-206ENST00000479501 REPIN1Q9BWE0 567 aaKnown RBP12.26□□□□□ -0.45
COL20A1-206ENST00000479501 C1QTNF5Q9BXJ0 243 aa12.26□□□□□ -0.45
COL20A1-206ENST00000479501 CSN3P07498 182 aa12.26□□□□□ -0.45
COL20A1-206ENST00000479501 CD3EP07766 207 aa12.26□□□□□ -0.45
COL20A1-206ENST00000479501 C1orf185Q5T7R7 199 aa12.26□□□□□ -0.45
COL20A1-206ENST00000479501 SSMEM1Q8WWF3 244 aa12.26□□□□□ -0.45
COL20A1-206ENST00000479501 TMEM167BQ9NRX6 74 aa12.26□□□□□ -0.45
COL20A1-206ENST00000479501 TUBD1Q9UJT1 453 aa12.26□□□□□ -0.45
COL20A1-206ENST00000479501 RPL11P62913 178 aaKnown RBP12.26□□□□□ -0.45
COL20A1-206ENST00000479501 OR5P3Q8WZ94 311 aa12.26□□□□□ -0.45
COL20A1-206ENST00000479501 TGIF2-C20orf24A0A0A6YYL0 155 aa12.25□□□□□ -0.45
COL20A1-206ENST00000479501 ZNF716A6NP11 495 aa12.25□□□□□ -0.45
COL20A1-206ENST00000479501 K7ERU9 68 aa12.25□□□□□ -0.45
COL20A1-206ENST00000479501 RND3P61587 244 aa12.25□□□□□ -0.45
COL20A1-206ENST00000479501 OR1P1Q8NH06 330 aa12.25□□□□□ -0.45
COL20A1-206ENST00000479501 OR2V2Q96R30 315 aa12.25□□□□□ -0.45
COL20A1-206ENST00000479501 HSPB9Q9BQS6 159 aa12.25□□□□□ -0.45
COL20A1-206ENST00000479501 RSG1Q9BU20 258 aa12.25□□□□□ -0.45
COL20A1-206ENST00000479501 CXorf65A6NEN9 183 aa12.25□□□□□ -0.45
COL20A1-206ENST00000479501 LINC00587B1AMM8 73 aa12.25□□□□□ -0.45
COL20A1-206ENST00000479501 J3QW42 95 aa12.25□□□□□ -0.45
COL20A1-206ENST00000479501 FAM87AP0C7U9 286 aa12.25□□□□□ -0.45
COL20A1-206ENST00000479501 CEBPDP49716 269 aaPredicted RBP12.25□□□□□ -0.45
COL20A1-206ENST00000479501 UBE2L3P68036 154 aaKnown RBP12.25□□□□□ -0.45
COL20A1-206ENST00000479501 OR1L1Q8NH94 360 aa12.25□□□□□ -0.45
COL20A1-206ENST00000479501 TMEM230Q96A57 120 aa12.25□□□□□ -0.45
COL20A1-206ENST00000479501 RPEQ96AT9 228 aa12.25□□□□□ -0.45
COL20A1-206ENST00000479501 ABHD14BQ96IU4 210 aa12.25□□□□□ -0.45
COL20A1-206ENST00000479501 PCGF1Q9BSM1 259 aa12.25□□□□□ -0.45
COL20A1-206ENST00000479501 DNASE2O00115 360 aaPredicted RBP12.25□□□□□ -0.45
COL20A1-206ENST00000479501 FAM157CP0CG43 387 aa12.25□□□□□ -0.45
COL20A1-206ENST00000479501 OPRK1P41145 380 aa12.25□□□□□ -0.45
COL20A1-206ENST00000479501 PTGDSP41222 190 aa12.25□□□□□ -0.45
COL20A1-206ENST00000479501 MEF2BQ02080 365 aaPredicted RBP12.25□□□□□ -0.45
COL20A1-206ENST00000479501 PSG5Q15238 335 aa12.25□□□□□ -0.45
COL20A1-206ENST00000479501 Q6ZT83 130 aa12.25□□□□□ -0.45
COL20A1-206ENST00000479501 LINC00469Q8N7U9 141 aa12.25□□□□□ -0.45
COL20A1-206ENST00000479501 ZIC4Q8N9L1 334 aa12.25□□□□□ -0.45
COL20A1-206ENST00000479501 OR4P4Q8NGL7 312 aa12.25□□□□□ -0.45
COL20A1-206ENST00000479501 OR1L4Q8NGR5 311 aa12.25□□□□□ -0.45
COL20A1-206ENST00000479501 LYZL4Q96KX0 146 aa12.25□□□□□ -0.45
COL20A1-206ENST00000479501 DOCK7Q96N67 2140 aa12.25□□□□□ -0.45
COL20A1-206ENST00000479501 NAGKQ9UJ70 344 aa12.25□□□□□ -0.45
COL20A1-206ENST00000479501 SPTAN1Q13813 2472 aaKnown RBP12.25□□□□□ -0.45
COL20A1-206ENST00000479501 PLXND1Q9Y4D7 1925 aa12.25□□□□□ -0.45
COL20A1-206ENST00000479501 CLDN14O95500 239 aa12.25□□□□□ -0.45
COL20A1-206ENST00000479501 PCP4P48539 62 aa12.25□□□□□ -0.45
COL20A1-206ENST00000479501 FHITP49789 147 aa12.25□□□□□ -0.45
COL20A1-206ENST00000479501 CCL8P80075 99 aa12.25□□□□□ -0.45
COL20A1-206ENST00000479501 OR1A1Q9P1Q5 309 aa12.25□□□□□ -0.45
COL20A1-206ENST00000479501 CLN8Q9UBY8 286 aa12.25□□□□□ -0.45
COL20A1-206ENST00000479501 SIAH2O43255 324 aa12.24□□□□□ -0.45
COL20A1-206ENST00000479501 OR2J3O76001 311 aa12.24□□□□□ -0.45
COL20A1-206ENST00000479501 NEURL1O76050 574 aa12.24□□□□□ -0.45
COL20A1-206ENST00000479501 MPV17P39210 176 aa12.24□□□□□ -0.45
COL20A1-206ENST00000479501 KRTCAP3Q53RY4 240 aa12.24□□□□□ -0.45
COL20A1-206ENST00000479501 ZNF818PQ6ZRF7 136 aa12.24□□□□□ -0.45
COL20A1-206ENST00000479501 SELENOHQ8IZQ5 122 aaKnown RBP12.24□□□□□ -0.45
COL20A1-206ENST00000479501 GPR146Q96CH1 333 aa12.24□□□□□ -0.45
COL20A1-206ENST00000479501 RTBDNQ9BSG5 229 aaPredicted RBP12.24□□□□□ -0.45
COL20A1-206ENST00000479501 MS4A5Q9H3V2 200 aa12.24□□□□□ -0.45
COL20A1-206ENST00000479501 CARHSP1Q9Y2V2 147 aaKnown RBP12.24□□□□□ -0.45
COL20A1-206ENST00000479501 TRGC1P0CF51 173 aa12.24□□□□□ -0.45
COL20A1-206ENST00000479501 PAFAH1B2P68402 229 aa12.24□□□□□ -0.45
COL20A1-206ENST00000479501 RARRES2Q99969 163 aa12.24□□□□□ -0.45
COL20A1-206ENST00000479501 WASHC3Q9Y3C0 194 aa12.24□□□□□ -0.45
COL20A1-206ENST00000479501 FANCMQ8IYD8 2048 aa12.24□□□□□ -0.45
COL20A1-206ENST00000479501 MSGN1A6NI15 193 aa12.24□□□□□ -0.45
COL20A1-206ENST00000479501 BRS3P32247 399 aa12.24□□□□□ -0.45
COL20A1-206ENST00000479501 LHX2P50458 406 aa12.24□□□□□ -0.45
COL20A1-206ENST00000479501 VSTM2AQ8TAG5 236 aa12.24□□□□□ -0.45
COL20A1-206ENST00000479501 HELTA6NFD8 242 aa12.23□□□□□ -0.45
COL20A1-206ENST00000479501 ZNF735P0CB33 412 aa12.23□□□□□ -0.45
COL20A1-206ENST00000479501 WDR25Q64LD2 544 aaPredicted RBP12.23□□□□□ -0.45
COL20A1-206ENST00000479501 FGFRL1Q8N441 504 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms