RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.05□□□□□ -1.92
CCDC171-207ENST00000478913 TRAV6A0A075B6T7 132 aa3.05□□□□□ -1.92
CCDC171-207ENST00000478913 LOC105371267A0A1B0GV96 52 aa3.05□□□□□ -1.92
CCDC171-207ENST00000478913 LINC00862A6NCI5 91 aa3.05□□□□□ -1.92
CCDC171-207ENST00000478913 OR5H1A6NKK0 313 aa3.05□□□□□ -1.92
CCDC171-207ENST00000478913 OR5B21A6NL26 309 aa3.05□□□□□ -1.92
CCDC171-207ENST00000478913 ZNF208O43345 1280 aa3.05□□□□□ -1.92
CCDC171-207ENST00000478913 SSNA1O43805 119 aa3.05□□□□□ -1.92
CCDC171-207ENST00000478913 SEMA3DO95025 777 aa3.05□□□□□ -1.92
CCDC171-207ENST00000478913 NSA2O95478 260 aaKnown RBP3.05□□□□□ -1.92
CCDC171-207ENST00000478913 OR56A5P0C7T3 313 aa3.05□□□□□ -1.92
CCDC171-207ENST00000478913 PIPP12273 146 aaPredicted RBP3.05□□□□□ -1.92
CCDC171-207ENST00000478913 PRKACAP17612 351 aa3.05□□□□□ -1.92
CCDC171-207ENST00000478913 PRPS1L1P21108 318 aa3.05□□□□□ -1.92
CCDC171-207ENST00000478913 GALP22466 123 aa3.05□□□□□ -1.92
CCDC171-207ENST00000478913 RPS3P23396 243 aaKnown RBP eCLIP3.05□□□□□ -1.92
CCDC171-207ENST00000478913 BTCP35070 178 aa3.05□□□□□ -1.92
CCDC171-207ENST00000478913 GGT2P36268 569 aa3.05□□□□□ -1.92
CCDC171-207ENST00000478913 IFNGR2P38484 337 aa3.05□□□□□ -1.92
CCDC171-207ENST00000478913 NMUP48645 174 aa3.05□□□□□ -1.92
CCDC171-207ENST00000478913 ATP1B3P54709 279 aa3.05□□□□□ -1.92
CCDC171-207ENST00000478913 CARD18P57730 90 aa3.05□□□□□ -1.92
CCDC171-207ENST00000478913 RRAS2P62070 204 aaPredicted RBP3.05□□□□□ -1.92
CCDC171-207ENST00000478913 RPL38P63173 70 aaKnown RBP3.05□□□□□ -1.92
CCDC171-207ENST00000478913 IFITM3Q01628 133 aa3.05□□□□□ -1.92
CCDC171-207ENST00000478913 PAX5Q02548 391 aa3.05□□□□□ -1.92
CCDC171-207ENST00000478913 ACVR1Q04771 509 aa3.05□□□□□ -1.92
CCDC171-207ENST00000478913 ST3GAL4Q11206 333 aa3.05□□□□□ -1.92
CCDC171-207ENST00000478913 IL18Q14116 193 aa3.05□□□□□ -1.92
CCDC171-207ENST00000478913 ARHGAP19Q14CB8 494 aa3.05□□□□□ -1.92
CCDC171-207ENST00000478913 XKR7Q5GH72 579 aa3.05□□□□□ -1.92
CCDC171-207ENST00000478913 KDM4DQ6B0I6 523 aa3.05□□□□□ -1.92
CCDC171-207ENST00000478913 PTRHD1Q6GMV3 140 aaKnown RBP3.05□□□□□ -1.92
CCDC171-207ENST00000478913 C1orf94Q6P1W5 598 aa3.05□□□□□ -1.92
CCDC171-207ENST00000478913 CYHR1Q6ZMK1 362 aa3.05□□□□□ -1.92
CCDC171-207ENST00000478913 ZNF621Q6ZSS3 439 aa3.05□□□□□ -1.92
CCDC171-207ENST00000478913 RASSF6Q6ZTQ3 369 aa3.05□□□□□ -1.92
CCDC171-207ENST00000478913 UTS2BQ765I0 119 aa3.05□□□□□ -1.92
CCDC171-207ENST00000478913 COMMD7Q86VX2 200 aa3.05□□□□□ -1.92
CCDC171-207ENST00000478913 CALHM3Q86XJ0 350 aa3.05□□□□□ -1.92
CCDC171-207ENST00000478913 LINC00471Q8N535 108 aa3.05□□□□□ -1.92
CCDC171-207ENST00000478913 DUSP18Q8NEJ0 188 aa3.05□□□□□ -1.92
CCDC171-207ENST00000478913 OR4F15Q8NGB8 312 aa3.05□□□□□ -1.92
CCDC171-207ENST00000478913 NT5C3BQ969T7 300 aa3.05□□□□□ -1.92
CCDC171-207ENST00000478913 TPD52L3Q96J77 140 aa3.05□□□□□ -1.92
CCDC171-207ENST00000478913 PANX1Q96RD7 426 aa3.05□□□□□ -1.92
CCDC171-207ENST00000478913 MGLLQ99685 303 aa3.05□□□□□ -1.92
CCDC171-207ENST00000478913 TMEM43Q9BTV4 400 aa3.05□□□□□ -1.92
CCDC171-207ENST00000478913 CDCA4Q9BXL8 241 aa3.05□□□□□ -1.92
CCDC171-207ENST00000478913 GABARAPL3Q9BY60 117 aa3.05□□□□□ -1.92
CCDC171-207ENST00000478913 NT5MQ9NPB1 228 aa3.05□□□□□ -1.92
CCDC171-207ENST00000478913 RBFOX1Q9NWB1 397 aaKnown RBP3.05□□□□□ -1.92
CCDC171-207ENST00000478913 MAT2BQ9NZL9 334 aa3.05□□□□□ -1.92
CCDC171-207ENST00000478913 ZNF222Q9UK12 451 aa3.05□□□□□ -1.92
CCDC171-207ENST00000478913 PCTPQ9UKL6 214 aa3.05□□□□□ -1.92
CCDC171-207ENST00000478913 TIMM22Q9Y584 194 aa3.05□□□□□ -1.92
CCDC171-207ENST00000478913 IGLV4-69A0A075B6H9 119 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 IGLV2-18A0A075B6J9 118 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 NCF1BA6NI72 391 aaPredicted RBP3.04□□□□□ -1.92
CCDC171-207ENST00000478913 NCF1CA8MVU1 366 aaPredicted RBP3.04□□□□□ -1.92
CCDC171-207ENST00000478913 SEC14L6B5MCN3 397 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 C5orf58C9J3I9 102 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 ZNF670-ZNF695F2Z2N8 137 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 INMT-MINDY4F8WBC2 141 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 M0R233 179 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 UPK1AO00322 258 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 LYRM1O43325 122 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 NIPSNAP2O75323 286 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 SLC22A5O76082 557 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 RAB36O95755 333 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 HMGN1P05114 100 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 HTR1AP08908 422 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 PIRTP0C851 137 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 IFI30P13284 250 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 SPNP16150 400 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 AGTR1P30556 359 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 BMI1P35226 326 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 NUP62P37198 522 aaPredicted RBP3.04□□□□□ -1.92
CCDC171-207ENST00000478913 MAGEA2P43356 314 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 CDKN2DP55273 166 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 CLDN8P56748 225 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 AP3S2P59780 193 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 B2MP61769 119 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 ERVK-25P63136 954 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 PSPHP78330 225 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 CHIT1Q13231 466 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 TAF1AQ15573 450 aaPredicted RBP3.04□□□□□ -1.92
CCDC171-207ENST00000478913 GRK1Q15835 563 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 LY6EQ16553 131 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 CDKL4Q5MAI5 379 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 FAHD1Q6P587 224 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 GLT6D1Q7Z4J2 308 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 SNX29P2Q8IUI4 249 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 Q8N402 240 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 NATD1Q8N6N6 113 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 YIPF7Q8N8F6 280 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 OR10G2Q8NGC3 310 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 OR52M1Q8NGK5 317 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 OR5D13Q8NGL4 314 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 OR1N2Q8NGR9 330 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms