RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 SLC35D1Q9NTN3 355 aa11.18□□□□□ -0.62
SMARCE1-209ENST00000478349 RAB22AQ9UL26 194 aa11.18□□□□□ -0.62
SMARCE1-209ENST00000478349 STUB1Q9UNE7 303 aa11.18□□□□□ -0.62
SMARCE1-209ENST00000478349 FBXO7Q9Y3I1 522 aa11.18□□□□□ -0.62
SMARCE1-209ENST00000478349 FABP7O15540 132 aa11.17□□□□□ -0.62
SMARCE1-209ENST00000478349 SOX15O60248 233 aa11.17□□□□□ -0.62
SMARCE1-209ENST00000478349 SCTP09683 121 aa11.17□□□□□ -0.62
SMARCE1-209ENST00000478349 RRASP10301 218 aa11.17□□□□□ -0.62
SMARCE1-209ENST00000478349 MYL9P24844 172 aa11.17□□□□□ -0.62
SMARCE1-209ENST00000478349 SLURP1P55000 103 aa11.17□□□□□ -0.62
SMARCE1-209ENST00000478349 AQP4P55087 323 aa11.17□□□□□ -0.62
SMARCE1-209ENST00000478349 FXYD3Q14802 87 aa11.17□□□□□ -0.62
SMARCE1-209ENST00000478349 TMEM91Q6ZNR0 172 aa11.17□□□□□ -0.62
SMARCE1-209ENST00000478349 POC5Q8NA72 575 aa11.17□□□□□ -0.62
SMARCE1-209ENST00000478349 DRAXINQ8NBI3 349 aaPredicted RBP11.17□□□□□ -0.62
SMARCE1-209ENST00000478349 MGLLQ99685 303 aa11.17□□□□□ -0.62
SMARCE1-209ENST00000478349 PARP12Q9H0J9 701 aaKnown RBP11.17□□□□□ -0.62
SMARCE1-209ENST00000478349 ALX4Q9H161 411 aaPredicted RBP11.17□□□□□ -0.62
SMARCE1-209ENST00000478349 ZMAT4Q9H898 229 aa11.17□□□□□ -0.62
SMARCE1-209ENST00000478349 RANGRFQ9HD47 186 aaPredicted RBP11.17□□□□□ -0.62
SMARCE1-209ENST00000478349 RBM7Q9Y580 266 aaKnown RBP11.17□□□□□ -0.62
SMARCE1-209ENST00000478349 IGHV4OR15-8A0A075B7B6 117 aa11.16□□□□□ -0.62
SMARCE1-209ENST00000478349 A0A087WW49 117 aa11.16□□□□□ -0.62
SMARCE1-209ENST00000478349 METTL21EPA6NDL7 271 aa11.16□□□□□ -0.62
SMARCE1-209ENST00000478349 FOXI3A8MTJ6 420 aaPredicted RBP11.16□□□□□ -0.62
SMARCE1-209ENST00000478349 BET1O15155 118 aa11.16□□□□□ -0.62
SMARCE1-209ENST00000478349 SLC25A17O43808 307 aa11.16□□□□□ -0.62
SMARCE1-209ENST00000478349 CREBL2O60519 120 aaPredicted RBP11.16□□□□□ -0.62
SMARCE1-209ENST00000478349 IGHV3-11P01762 117 aa11.16□□□□□ -0.62
SMARCE1-209ENST00000478349 IGKV1-16P04430 117 aa11.16□□□□□ -0.62
SMARCE1-209ENST00000478349 GP9P14770 177 aa11.16□□□□□ -0.62
SMARCE1-209ENST00000478349 AADACP22760 399 aa11.16□□□□□ -0.62
SMARCE1-209ENST00000478349 TALDO1P37837 337 aa11.16□□□□□ -0.62
SMARCE1-209ENST00000478349 TBCEQ15813 527 aaPredicted RBP11.16□□□□□ -0.62
SMARCE1-209ENST00000478349 C2orf76Q3KRA6 126 aa11.16□□□□□ -0.62
SMARCE1-209ENST00000478349 ZNF367Q7RTV3 350 aa11.16□□□□□ -0.62
SMARCE1-209ENST00000478349 ZNF383Q8NA42 475 aa11.16□□□□□ -0.62
SMARCE1-209ENST00000478349 ADTRPQ96IZ2 230 aa11.16□□□□□ -0.62
SMARCE1-209ENST00000478349 CYYR1Q96J86 154 aa11.16□□□□□ -0.62
SMARCE1-209ENST00000478349 HARBI1Q96MB7 349 aa11.16□□□□□ -0.62
SMARCE1-209ENST00000478349 MS4A10Q96PG2 267 aa11.16□□□□□ -0.62
SMARCE1-209ENST00000478349 ASCL2Q99929 193 aa11.16□□□□□ -0.62
SMARCE1-209ENST00000478349 GINS4Q9BRT9 223 aa11.16□□□□□ -0.62
SMARCE1-209ENST00000478349 FAM103A1Q9BTL3 118 aaKnown RBP11.16□□□□□ -0.62
SMARCE1-209ENST00000478349 CABLES2Q9BTV7 478 aa11.16□□□□□ -0.62
SMARCE1-209ENST00000478349 OR2D2Q9H210 308 aa11.16□□□□□ -0.62
SMARCE1-209ENST00000478349 NBEAL2Q6ZNJ1 2754 aa11.16□□□□□ -0.62
SMARCE1-209ENST00000478349 COL7A1Q02388 2944 aa11.15□□□□□ -0.62
SMARCE1-209ENST00000478349 FCN1O00602 326 aa11.15□□□□□ -0.62
SMARCE1-209ENST00000478349 SPNP16150 400 aa11.15□□□□□ -0.62
SMARCE1-209ENST00000478349 CLDN12P56749 244 aa11.15□□□□□ -0.62
SMARCE1-209ENST00000478349 TATDN3Q17R31 274 aa11.15□□□□□ -0.62
SMARCE1-209ENST00000478349 VMA21Q3ZAQ7 101 aa11.15□□□□□ -0.62
SMARCE1-209ENST00000478349 ANKRD13BQ86YJ7 626 aa11.15□□□□□ -0.62
SMARCE1-209ENST00000478349 RHOVQ96L33 236 aa11.15□□□□□ -0.62
SMARCE1-209ENST00000478349 GFI1Q99684 422 aa11.15□□□□□ -0.62
SMARCE1-209ENST00000478349 RSRP1Q9BUV0 290 aa11.15□□□□□ -0.62
SMARCE1-209ENST00000478349 GAB2Q9UQC2 676 aa11.15□□□□□ -0.62
SMARCE1-209ENST00000478349 TRAV1-2A0A0B4J238 106 aa11.14□□□□□ -0.63
SMARCE1-209ENST00000478349 SHOXO15266 292 aa11.14□□□□□ -0.63
SMARCE1-209ENST00000478349 FCGR3AP08637 254 aa11.14□□□□□ -0.63
SMARCE1-209ENST00000478349 EGR2P11161 476 aaPredicted RBP11.14□□□□□ -0.63
SMARCE1-209ENST00000478349 RAB6AP20340 208 aa11.14□□□□□ -0.63
SMARCE1-209ENST00000478349 CRHBPP24387 322 aa11.14□□□□□ -0.63
SMARCE1-209ENST00000478349 TMEM50BP56557 158 aa11.14□□□□□ -0.63
SMARCE1-209ENST00000478349 FABP5Q01469 135 aa11.14□□□□□ -0.63
SMARCE1-209ENST00000478349 PLAC9Q5JTB6 97 aa11.14□□□□□ -0.63
SMARCE1-209ENST00000478349 HES5Q5TA89 166 aa11.14□□□□□ -0.63
SMARCE1-209ENST00000478349 SGPP2Q8IWX5 399 aa11.14□□□□□ -0.63
SMARCE1-209ENST00000478349 OR10R2Q8NGX6 335 aa11.14□□□□□ -0.63
SMARCE1-209ENST00000478349 CASTOR1Q8WTX7 329 aa11.14□□□□□ -0.63
SMARCE1-209ENST00000478349 RCHY1Q96PM5 261 aa11.14□□□□□ -0.63
SMARCE1-209ENST00000478349 PHB2Q99623 299 aa11.14□□□□□ -0.63
SMARCE1-209ENST00000478349 TRBV6-7A0A0A0MS04 114 aa11.13□□□□□ -0.63
SMARCE1-209ENST00000478349 IGKV1-6A0A0C4DH72 117 aa11.13□□□□□ -0.63
SMARCE1-209ENST00000478349 TMEM272A0A1B0GTI8 110 aa11.13□□□□□ -0.63
SMARCE1-209ENST00000478349 H0Y980 276 aa11.13□□□□□ -0.63
SMARCE1-209ENST00000478349 LDLRAD4O15165 306 aa11.13□□□□□ -0.63
SMARCE1-209ENST00000478349 BRI3O95415 125 aa11.13□□□□□ -0.63
SMARCE1-209ENST00000478349 HIST1H1DP16402 221 aaKnown RBP11.13□□□□□ -0.63
SMARCE1-209ENST00000478349 ARFRP1Q13795 201 aa11.13□□□□□ -0.63
SMARCE1-209ENST00000478349 SRSF7Q16629 238 aaKnown RBP eCLIP11.13□□□□□ -0.63
SMARCE1-209ENST00000478349 USMG5Q96IX5 58 aa11.13□□□□□ -0.63
SMARCE1-209ENST00000478349 TPSG1Q9NRR2 321 aa11.13□□□□□ -0.63
SMARCE1-209ENST00000478349 A0A0B4J203 849 aa11.12□□□□□ -0.63
SMARCE1-209ENST00000478349 IFITM5A6NNB3 132 aa11.12□□□□□ -0.63
SMARCE1-209ENST00000478349 MPPED1O15442 326 aa11.12□□□□□ -0.63
SMARCE1-209ENST00000478349 SCGNO76038 276 aa11.12□□□□□ -0.63
SMARCE1-209ENST00000478349 ACTL6BO94805 426 aa11.12□□□□□ -0.63
SMARCE1-209ENST00000478349 FRMD6-AS1P0C7T7 363 aa11.12□□□□□ -0.63
SMARCE1-209ENST00000478349 RAB3BP20337 219 aa11.12□□□□□ -0.63
SMARCE1-209ENST00000478349 GALP22466 123 aa11.12□□□□□ -0.63
SMARCE1-209ENST00000478349 SSX1Q16384 188 aa11.12□□□□□ -0.63
SMARCE1-209ENST00000478349 TMEM177Q53S58 311 aa11.12□□□□□ -0.63
SMARCE1-209ENST00000478349 FAM209BQ5JX69 171 aa11.12□□□□□ -0.63
SMARCE1-209ENST00000478349 MUC7Q8TAX7 377 aa11.12□□□□□ -0.63
SMARCE1-209ENST00000478349 PALMDQ9NP74 551 aa11.12□□□□□ -0.63
SMARCE1-209ENST00000478349 NDUFB11Q9NX14 153 aa11.12□□□□□ -0.63
SMARCE1-209ENST00000478349 SDHAF2Q9NX18 166 aa11.12□□□□□ -0.63
SMARCE1-209ENST00000478349 COA4Q9NYJ1 87 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms