RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 ZDHHC16Q969W1 377 aa13.04□□□□□ -0.32
VHL-203ENST00000477538 RTBDNQ9BSG5 229 aaPredicted RBP13.04□□□□□ -0.32
VHL-203ENST00000477538 OCEL1Q9H607 264 aa13.04□□□□□ -0.32
VHL-203ENST00000477538 SVEP1Q4LDE5 3571 aa13.03□□□□□ -0.32
VHL-203ENST00000477538 IGHV3-72A0A0B4J1Y9 119 aa13.03□□□□□ -0.32
VHL-203ENST00000477538 RNF212BA8MTL3 300 aa13.03□□□□□ -0.32
VHL-203ENST00000477538 ARPC1BO15143 372 aaKnown RBP13.03□□□□□ -0.32
VHL-203ENST00000477538 BRS3P32247 399 aa13.03□□□□□ -0.32
VHL-203ENST00000477538 RPL30P62888 115 aaKnown RBP13.03□□□□□ -0.32
VHL-203ENST00000477538 LRRC75BQ2VPJ9 315 aa13.03□□□□□ -0.32
VHL-203ENST00000477538 TMED4Q7Z7H5 227 aa13.03□□□□□ -0.32
VHL-203ENST00000477538 TBC1D26Q86UD7 250 aa13.03□□□□□ -0.32
VHL-203ENST00000477538 CENPSQ8N2Z9 138 aa13.03□□□□□ -0.32
VHL-203ENST00000477538 OR51H1Q8NH63 302 aa13.03□□□□□ -0.32
VHL-203ENST00000477538 CFHR4Q92496 578 aa13.03□□□□□ -0.32
VHL-203ENST00000477538 ZNF48Q96MX3 618 aaPredicted RBP13.03□□□□□ -0.32
VHL-203ENST00000477538 C20orf85Q9H1P6 137 aa13.03□□□□□ -0.32
VHL-203ENST00000477538 NUDT15Q9NV35 164 aa13.03□□□□□ -0.32
VHL-203ENST00000477538 FLVCR2Q9UPI3 526 aa13.03□□□□□ -0.32
VHL-203ENST00000477538 VGLL3A8MV65 326 aa13.02□□□□□ -0.33
VHL-203ENST00000477538 H0YJW9 148 aa13.02□□□□□ -0.33
VHL-203ENST00000477538 CRLF1O75462 422 aa13.02□□□□□ -0.33
VHL-203ENST00000477538 PTTG1O95997 202 aa13.02□□□□□ -0.33
VHL-203ENST00000477538 APOA2P02652 100 aa13.02□□□□□ -0.33
VHL-203ENST00000477538 HABP2Q14520 560 aaPredicted RBP13.02□□□□□ -0.33
VHL-203ENST00000477538 TUSC1Q2TAM9 212 aa13.02□□□□□ -0.33
VHL-203ENST00000477538 ADAD2Q8NCV1 583 aaKnown RBP13.02□□□□□ -0.33
VHL-203ENST00000477538 DUSP18Q8NEJ0 188 aa13.02□□□□□ -0.33
VHL-203ENST00000477538 OR5AN1Q8NGI8 311 aa13.02□□□□□ -0.33
VHL-203ENST00000477538 DDB2Q92466 427 aa13.02□□□□□ -0.33
VHL-203ENST00000477538 SSX3Q99909 188 aa13.02□□□□□ -0.33
VHL-203ENST00000477538 PRDM13Q9H4Q3 707 aa13.02□□□□□ -0.33
VHL-203ENST00000477538 SLC35D1Q9NTN3 355 aa13.02□□□□□ -0.33
VHL-203ENST00000477538 PRELID3BQ9Y3B1 194 aa13.02□□□□□ -0.33
VHL-203ENST00000477538 NUBP2Q9Y5Y2 271 aa13.02□□□□□ -0.33
VHL-203ENST00000477538 TRAV6A0A075B6T7 132 aa13.01□□□□□ -0.33
VHL-203ENST00000477538 MPPED1O15442 326 aa13.01□□□□□ -0.33
VHL-203ENST00000477538 VENTXO95231 258 aa13.01□□□□□ -0.33
VHL-203ENST00000477538 AKR1C4P17516 323 aa13.01□□□□□ -0.33
VHL-203ENST00000477538 F2RP25116 425 aa13.01□□□□□ -0.33
VHL-203ENST00000477538 CD1BP29016 333 aa13.01□□□□□ -0.33
VHL-203ENST00000477538 MC5RP33032 325 aa13.01□□□□□ -0.33
VHL-203ENST00000477538 RAB13P51153 203 aa13.01□□□□□ -0.33
VHL-203ENST00000477538 DYNLT3P51808 116 aa13.01□□□□□ -0.33
VHL-203ENST00000477538 TAS2R31P59538 309 aa13.01□□□□□ -0.33
VHL-203ENST00000477538 TAGLNQ01995 201 aaKnown RBP13.01□□□□□ -0.33
VHL-203ENST00000477538 AANATQ16613 207 aa13.01□□□□□ -0.33
VHL-203ENST00000477538 OR2B11Q5JQS5 317 aa13.01□□□□□ -0.33
VHL-203ENST00000477538 Q6YL49 198 aa13.01□□□□□ -0.33
VHL-203ENST00000477538 SIGLECL1Q8N7X8 197 aa13.01□□□□□ -0.33
VHL-203ENST00000477538 ZFAND2BQ8WV99 257 aa13.01□□□□□ -0.33
VHL-203ENST00000477538 TMEM230Q96A57 120 aa13.01□□□□□ -0.33
VHL-203ENST00000477538 LIN7CQ9NUP9 197 aaKnown RBP13.01□□□□□ -0.33
VHL-203ENST00000477538 WASHC3Q9Y3C0 194 aa13.01□□□□□ -0.33
VHL-203ENST00000477538 PLXNB1O43157 2135 aa13.01□□□□□ -0.33
VHL-203ENST00000477538 ANK3Q12955 4377 aaKnown RBP13□□□□□ -0.33
VHL-203ENST00000477538 TEX13DA0A0J9YY54 714 aaPredicted RBP13□□□□□ -0.33
VHL-203ENST00000477538 CRYM-AS1A6NIL9 109 aa13□□□□□ -0.33
VHL-203ENST00000477538 FAM90A9PA6NNJ1 464 aa13□□□□□ -0.33
VHL-203ENST00000477538 H3BUX3 64 aa13□□□□□ -0.33
VHL-203ENST00000477538 H7C2Y5 167 aa13□□□□□ -0.33
VHL-203ENST00000477538 FCGR3BO75015 233 aa13□□□□□ -0.33
VHL-203ENST00000477538 SNRNP70P08621 437 aaKnown RBP13□□□□□ -0.33
VHL-203ENST00000477538 H2AFB2P0C5Z0 115 aa13□□□□□ -0.33
VHL-203ENST00000477538 FAM157CP0CG43 387 aa13□□□□□ -0.33
VHL-203ENST00000477538 RRASP10301 218 aa13□□□□□ -0.33
VHL-203ENST00000477538 CD24P25063 80 aa13□□□□□ -0.33
VHL-203ENST00000477538 KIR2DS2P43631 304 aa13□□□□□ -0.33
VHL-203ENST00000477538 RTL8BQ17RB0 113 aa13□□□□□ -0.33
VHL-203ENST00000477538 RGS21Q2M5E4 152 aa13□□□□□ -0.33
VHL-203ENST00000477538 PLET1Q6UQ28 207 aa13□□□□□ -0.33
VHL-203ENST00000477538 PDPNQ86YL7 162 aa13□□□□□ -0.33
VHL-203ENST00000477538 CAPSLQ8WWF8 208 aa13□□□□□ -0.33
VHL-203ENST00000477538 NAA60Q9H7X0 242 aa13□□□□□ -0.33
VHL-203ENST00000477538 TNCP24821 2201 aa13□□□□□ -0.33
VHL-203ENST00000477538 IGKV1D-33P01593 117 aa12.99□□□□□ -0.33
VHL-203ENST00000477538 IGKV1-33P01594 117 aa12.99□□□□□ -0.33
VHL-203ENST00000477538 IGHV4-59P01825 116 aa12.99□□□□□ -0.33
VHL-203ENST00000477538 SPNP16150 400 aa12.99□□□□□ -0.33
VHL-203ENST00000477538 IER3P46695 156 aa12.99□□□□□ -0.33
VHL-203ENST00000477538 CBX3Q13185 183 aa12.99□□□□□ -0.33
VHL-203ENST00000477538 HES1Q14469 280 aa12.99□□□□□ -0.33
VHL-203ENST00000477538 TMEM128Q5BJH2 165 aa12.99□□□□□ -0.33
VHL-203ENST00000477538 RBMS3Q6XE24 437 aaKnown RBP12.99□□□□□ -0.33
VHL-203ENST00000477538 SLC25A42Q86VD7 318 aa12.99□□□□□ -0.33
VHL-203ENST00000477538 SGPP2Q8IWX5 399 aa12.99□□□□□ -0.33
VHL-203ENST00000477538 SPAG16Q8N0X2 631 aa12.99□□□□□ -0.33
VHL-203ENST00000477538 PIFOQ8TCI5 191 aa12.99□□□□□ -0.33
VHL-203ENST00000477538 RBMXL1Q96E39 390 aaKnown RBP12.99□□□□□ -0.33
VHL-203ENST00000477538 TET2Q6N021 2002 aaPredicted RBP12.99□□□□□ -0.33
VHL-203ENST00000477538 C3orf85A0A1B0GTC6 90 aa12.98□□□□□ -0.33
VHL-203ENST00000477538 BTBD17A6NE02 478 aa12.98□□□□□ -0.33
VHL-203ENST00000477538 H0Y980 276 aa12.98□□□□□ -0.33
VHL-203ENST00000477538 CRYZL1O95825 349 aa12.98□□□□□ -0.33
VHL-203ENST00000477538 MOSP00540 346 aa12.98□□□□□ -0.33
VHL-203ENST00000477538 FAM106CPP0CH98 169 aa12.98□□□□□ -0.33
VHL-203ENST00000477538 ANXA7P20073 488 aaKnown RBP12.98□□□□□ -0.33
VHL-203ENST00000477538 RAB25P57735 213 aa12.98□□□□□ -0.33
VHL-203ENST00000477538 BRWD1-AS2P59051 145 aa12.98□□□□□ -0.33
VHL-203ENST00000477538 UBE2MP61081 183 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms