RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 PYDC1Q8WXC3 89 aa1.16□□□□□ -2.22
TARDBP-208ENST00000477447 AP3S1Q92572 193 aa1.16□□□□□ -2.22
TARDBP-208ENST00000477447 SLC22A4Q9H015 551 aa1.16□□□□□ -2.22
TARDBP-208ENST00000477447 METTL9Q9H1A3 318 aa1.16□□□□□ -2.22
TARDBP-208ENST00000477447 C11orf49Q9H6J7 331 aa1.16□□□□□ -2.22
TARDBP-208ENST00000477447 TXNL4BQ9NX01 149 aaKnown RBP1.16□□□□□ -2.22
TARDBP-208ENST00000477447 FAM206AQ9NX38 181 aa1.16□□□□□ -2.22
TARDBP-208ENST00000477447 PAIP2BQ9ULR5 123 aaKnown RBP1.16□□□□□ -2.22
TARDBP-208ENST00000477447 MTCH2Q9Y6C9 303 aa1.16□□□□□ -2.22
TARDBP-208ENST00000477447 LCTP09848 1927 aa1.16□□□□□ -2.22
TARDBP-208ENST00000477447 CACNA1GO43497 2377 aa1.15□□□□□ -2.22
TARDBP-208ENST00000477447 NUP160Q12769 1436 aa1.15□□□□□ -2.22
TARDBP-208ENST00000477447 EFCAB10A6NFE3 127 aa1.15□□□□□ -2.23
TARDBP-208ENST00000477447 C21orf140B9A014 251 aa1.15□□□□□ -2.23
TARDBP-208ENST00000477447 FTCDNL1E5RQL4 147 aa1.15□□□□□ -2.23
TARDBP-208ENST00000477447 F5H768 121 aa1.15□□□□□ -2.23
TARDBP-208ENST00000477447 H0Y980 276 aa1.15□□□□□ -2.23
TARDBP-208ENST00000477447 H3BRN7 92 aa1.15□□□□□ -2.23
TARDBP-208ENST00000477447 H3BSA7 217 aa1.15□□□□□ -2.23
TARDBP-208ENST00000477447 M0R036 132 aa1.15□□□□□ -2.23
TARDBP-208ENST00000477447 SULT1C2O00338 296 aa1.15□□□□□ -2.23
TARDBP-208ENST00000477447 CCRL2O00421 344 aa1.15□□□□□ -2.23
TARDBP-208ENST00000477447 SOD1P00441 154 aa1.15□□□□□ -2.23
TARDBP-208ENST00000477447 PET100P0DJ07 73 aa1.15□□□□□ -2.23
TARDBP-208ENST00000477447 CTSEP14091 401 aa1.15□□□□□ -2.23
TARDBP-208ENST00000477447 HIST1H1CP16403 213 aaKnown RBP1.15□□□□□ -2.23
TARDBP-208ENST00000477447 S100A1P23297 94 aa1.15□□□□□ -2.23
TARDBP-208ENST00000477447 IDH3GP51553 393 aaPredicted RBP1.15□□□□□ -2.23
TARDBP-208ENST00000477447 PSME3P61289 254 aa1.15□□□□□ -2.23
TARDBP-208ENST00000477447 AESQ08117 197 aa1.15□□□□□ -2.23
TARDBP-208ENST00000477447 MLLT11Q13015 90 aaPredicted RBP1.15□□□□□ -2.23
TARDBP-208ENST00000477447 TMED2Q15363 201 aa1.15□□□□□ -2.23
TARDBP-208ENST00000477447 SS18Q15532 418 aa1.15□□□□□ -2.23
TARDBP-208ENST00000477447 ZNHIT3Q15649 155 aaPredicted RBP1.15□□□□□ -2.23
TARDBP-208ENST00000477447 NDUFA5Q16718 116 aa1.15□□□□□ -2.23
TARDBP-208ENST00000477447 CCDC58Q4VC31 144 aa1.15□□□□□ -2.23
TARDBP-208ENST00000477447 AKIRIN2Q53H80 203 aa1.15□□□□□ -2.23
TARDBP-208ENST00000477447 CENPWQ5EE01 88 aa1.15□□□□□ -2.23
TARDBP-208ENST00000477447 SDHAF4Q5VUM1 108 aa1.15□□□□□ -2.23
TARDBP-208ENST00000477447 TMEM42Q69YG0 159 aa1.15□□□□□ -2.23
TARDBP-208ENST00000477447 LRRN1Q6UXK5 716 aa1.15□□□□□ -2.23
TARDBP-208ENST00000477447 CCDC121Q6ZUS5 278 aa1.15□□□□□ -2.23
TARDBP-208ENST00000477447 SMIM15Q7Z3B0 74 aa1.15□□□□□ -2.23
TARDBP-208ENST00000477447 S100A7AQ86SG5 101 aa1.15□□□□□ -2.23
TARDBP-208ENST00000477447 RIBC1Q8N443 379 aaPredicted RBP1.15□□□□□ -2.23
TARDBP-208ENST00000477447 CCDC112Q8NEF3 446 aa1.15□□□□□ -2.23
TARDBP-208ENST00000477447 OR5L1Q8NGL2 311 aa1.15□□□□□ -2.23
TARDBP-208ENST00000477447 FAM172AQ8WUF8 416 aa1.15□□□□□ -2.23
TARDBP-208ENST00000477447 PPWD1Q96BP3 646 aaKnown RBP1.15□□□□□ -2.23
TARDBP-208ENST00000477447 RMND5BQ96G75 393 aaPredicted RBP1.15□□□□□ -2.23
TARDBP-208ENST00000477447 CCDC42Q96M95 316 aa1.15□□□□□ -2.23
TARDBP-208ENST00000477447 OR52B2Q96RD2 323 aa1.15□□□□□ -2.23
TARDBP-208ENST00000477447 HBEGFQ99075 208 aa1.15□□□□□ -2.23
TARDBP-208ENST00000477447 DCUN1D5Q9BTE7 237 aa1.15□□□□□ -2.23
TARDBP-208ENST00000477447 TMEM109Q9BVC6 243 aa1.15□□□□□ -2.23
TARDBP-208ENST00000477447 SLC19A3Q9BZV2 496 aa1.15□□□□□ -2.23
TARDBP-208ENST00000477447 TLNRD1Q9H1K6 362 aa1.15□□□□□ -2.23
TARDBP-208ENST00000477447 XPNPEP1Q9NQW7 623 aa1.15□□□□□ -2.23
TARDBP-208ENST00000477447 BATF3Q9NR55 127 aa1.15□□□□□ -2.23
TARDBP-208ENST00000477447 CMTM6Q9NX76 183 aa1.15□□□□□ -2.23
TARDBP-208ENST00000477447 STOML2Q9UJZ1 356 aa1.15□□□□□ -2.23
TARDBP-208ENST00000477447 GUCA1BQ9UMX6 200 aa1.15□□□□□ -2.23
TARDBP-208ENST00000477447 POLR3HQ9Y535 204 aaPredicted RBP1.15□□□□□ -2.23
TARDBP-208ENST00000477447 FLT4P35916 1363 aa1.15□□□□□ -2.23
TARDBP-208ENST00000477447 RFX7Q2KHR2 1363 aa1.15□□□□□ -2.23
TARDBP-208ENST00000477447 RAB3GAP2Q9H2M9 1393 aa1.15□□□□□ -2.23
TARDBP-208ENST00000477447 OTOFQ9HC10 1997 aa1.15□□□□□ -2.23
TARDBP-208ENST00000477447 PTPRKQ15262 1439 aa1.15□□□□□ -2.23
TARDBP-208ENST00000477447 C9orf84Q5VXU9 1444 aa1.15□□□□□ -2.23
TARDBP-208ENST00000477447 ATG2BQ96BY7 2078 aa1.14□□□□□ -2.23
TARDBP-208ENST00000477447 PCF11O94913 1555 aaKnown RBP1.14□□□□□ -2.23
TARDBP-208ENST00000477447 CEP170Q5SW79 1584 aa1.14□□□□□ -2.23
TARDBP-208ENST00000477447 NUP153P49790 1475 aaKnown RBP1.14□□□□□ -2.23
TARDBP-208ENST00000477447 MUC6Q6W4X9 2439 aa1.14□□□□□ -2.23
TARDBP-208ENST00000477447 KIF24Q5T7B8 1368 aa1.14□□□□□ -2.23
TARDBP-208ENST00000477447 M0QZ92 97 aa1.14□□□□□ -2.23
TARDBP-208ENST00000477447 KPNA3O00505 521 aaPredicted RBP1.14□□□□□ -2.23
TARDBP-208ENST00000477447 CXCR6O00574 342 aa1.14□□□□□ -2.23
TARDBP-208ENST00000477447 BIRC5O15392 142 aa1.14□□□□□ -2.23
TARDBP-208ENST00000477447 SYNGR1O43759 233 aa1.14□□□□□ -2.23
TARDBP-208ENST00000477447 KLRC4O43908 158 aa1.14□□□□□ -2.23
TARDBP-208ENST00000477447 HPGDSO60760 199 aa1.14□□□□□ -2.23
TARDBP-208ENST00000477447 SERPINA1P01009 418 aa1.14□□□□□ -2.23
TARDBP-208ENST00000477447 APOEP02649 317 aa1.14□□□□□ -2.23
TARDBP-208ENST00000477447 PRB1P04280 392 aa1.14□□□□□ -2.23
TARDBP-208ENST00000477447 KCNE1P15382 129 aa1.14□□□□□ -2.23
TARDBP-208ENST00000477447 CDK9P50750 372 aaKnown RBP1.14□□□□□ -2.23
TARDBP-208ENST00000477447 STC1P52823 247 aa1.14□□□□□ -2.23
TARDBP-208ENST00000477447 CLDN12P56749 244 aa1.14□□□□□ -2.23
TARDBP-208ENST00000477447 FAM3AP98173 230 aa1.14□□□□□ -2.23
TARDBP-208ENST00000477447 PRDX4Q13162 271 aa1.14□□□□□ -2.23
TARDBP-208ENST00000477447 SRSF6Q13247 344 aaKnown RBP1.14□□□□□ -2.23
TARDBP-208ENST00000477447 KRR1Q13601 381 aaKnown RBP1.14□□□□□ -2.23
TARDBP-208ENST00000477447 LRRC26Q2I0M4 334 aa1.14□□□□□ -2.23
TARDBP-208ENST00000477447 TBC1D28Q2M2D7 210 aa1.14□□□□□ -2.23
TARDBP-208ENST00000477447 DEFB115Q30KQ5 88 aa1.14□□□□□ -2.23
TARDBP-208ENST00000477447 ACSM3Q53FZ2 586 aa1.14□□□□□ -2.23
TARDBP-208ENST00000477447 BRMS1LQ5PSV4 323 aa1.14□□□□□ -2.23
TARDBP-208ENST00000477447 HACD4Q5VWC8 232 aa1.14□□□□□ -2.23
TARDBP-208ENST00000477447 DHRS4L2Q6PKH6 230 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 212.6 ms