RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 CNIH2Q6PI25 160 aa8.02□□□□□ -1.13
CCM2-208ENST00000476594 GLDNQ6ZMI3 551 aaPredicted RBP8.02□□□□□ -1.13
CCM2-208ENST00000476594 NR2C2APQ86WQ0 139 aa8.02□□□□□ -1.13
CCM2-208ENST00000476594 MRPL41Q8IXM3 137 aaKnown RBP8.02□□□□□ -1.13
CCM2-208ENST00000476594 LINC00482Q8N8I6 264 aa8.02□□□□□ -1.13
CCM2-208ENST00000476594 OR5M8Q8NGP6 311 aa8.02□□□□□ -1.13
CCM2-208ENST00000476594 C4orf3Q8WVX3 66 aa8.02□□□□□ -1.13
CCM2-208ENST00000476594 MAFIPQ8WZ33 124 aa8.02□□□□□ -1.13
CCM2-208ENST00000476594 CYYR1Q96J86 154 aa8.02□□□□□ -1.13
CCM2-208ENST00000476594 HARBI1Q96MB7 349 aa8.02□□□□□ -1.13
CCM2-208ENST00000476594 ST6GALNAC5Q9BVH7 336 aa8.02□□□□□ -1.13
CCM2-208ENST00000476594 PARP12Q9H0J9 701 aaKnown RBP8.02□□□□□ -1.13
CCM2-208ENST00000476594 FBXL15Q9H469 300 aa8.02□□□□□ -1.13
CCM2-208ENST00000476594 ZNF230Q9UIE0 474 aaPredicted RBP8.02□□□□□ -1.13
CCM2-208ENST00000476594 FOXA2Q9Y261 457 aaPredicted RBP8.02□□□□□ -1.13
CCM2-208ENST00000476594 MRPS7Q9Y2R9 242 aaKnown RBP8.02□□□□□ -1.13
CCM2-208ENST00000476594 PRELID3BQ9Y3B1 194 aa8.02□□□□□ -1.13
CCM2-208ENST00000476594 TMEM235A6NFC5 223 aa8.01□□□□□ -1.13
CCM2-208ENST00000476594 LINC01548A6NM66 108 aa8.01□□□□□ -1.13
CCM2-208ENST00000476594 CCL24O00175 119 aa8.01□□□□□ -1.13
CCM2-208ENST00000476594 CNIH1O95406 144 aa8.01□□□□□ -1.13
CCM2-208ENST00000476594 CNTFRP26992 372 aa8.01□□□□□ -1.13
CCM2-208ENST00000476594 PSMB8P28062 276 aa8.01□□□□□ -1.13
CCM2-208ENST00000476594 CBX5P45973 191 aa8.01□□□□□ -1.13
CCM2-208ENST00000476594 CRIP2P52943 208 aaPredicted RBP8.01□□□□□ -1.13
CCM2-208ENST00000476594 RAB25P57735 213 aa8.01□□□□□ -1.13
CCM2-208ENST00000476594 CFHR3Q02985 330 aa8.01□□□□□ -1.13
CCM2-208ENST00000476594 VMA21Q3ZAQ7 101 aa8.01□□□□□ -1.13
CCM2-208ENST00000476594 ZNF562Q6V9R5 426 aa8.01□□□□□ -1.13
CCM2-208ENST00000476594 ZNF645Q8N7E2 425 aa8.01□□□□□ -1.13
CCM2-208ENST00000476594 DRAXINQ8NBI3 349 aaPredicted RBP8.01□□□□□ -1.13
CCM2-208ENST00000476594 MRAPQ8TCY5 172 aa8.01□□□□□ -1.13
CCM2-208ENST00000476594 UBE2E2Q96LR5 201 aa8.01□□□□□ -1.13
CCM2-208ENST00000476594 TMEM68Q96MH6 324 aa8.01□□□□□ -1.13
CCM2-208ENST00000476594 SDHAF2Q9NX18 166 aa8.01□□□□□ -1.13
CCM2-208ENST00000476594 SPATA2Q9UM82 520 aa8.01□□□□□ -1.13
CCM2-208ENST00000476594 VSIG4Q9Y279 399 aa8.01□□□□□ -1.13
CCM2-208ENST00000476594 WSB1Q9Y6I7 421 aa8.01□□□□□ -1.13
CCM2-208ENST00000476594 TRAV18A0A075B6X5 111 aa8□□□□□ -1.13
CCM2-208ENST00000476594 A0A1W2PN81 502 aa8□□□□□ -1.13
CCM2-208ENST00000476594 SHOXO15266 292 aa8□□□□□ -1.13
CCM2-208ENST00000476594 OR8U8P0C7N1 319 aa8□□□□□ -1.13
CCM2-208ENST00000476594 PPIFP30405 207 aaKnown RBP8□□□□□ -1.13
CCM2-208ENST00000476594 CHRNA7P36544 502 aa8□□□□□ -1.13
CCM2-208ENST00000476594 CX3CL1P78423 397 aa8□□□□□ -1.13
CCM2-208ENST00000476594 PSG5Q15238 335 aa8□□□□□ -1.13
CCM2-208ENST00000476594 ZNF260Q3ZCT1 412 aa8□□□□□ -1.13
CCM2-208ENST00000476594 AKIRIN2Q53H80 203 aa8□□□□□ -1.13
CCM2-208ENST00000476594 ACTBL2Q562R1 376 aa8□□□□□ -1.13
CCM2-208ENST00000476594 FOXB2Q5VYV0 432 aa8□□□□□ -1.13
CCM2-208ENST00000476594 UNQ5815/PRO19632Q6UWF5 114 aa8□□□□□ -1.13
CCM2-208ENST00000476594 LCNL1Q6ZST4 164 aa8□□□□□ -1.13
CCM2-208ENST00000476594 PPP1R27Q86WC6 154 aa8□□□□□ -1.13
CCM2-208ENST00000476594 H1FOOQ8IZA3 346 aaPredicted RBP8□□□□□ -1.13
CCM2-208ENST00000476594 ZNF383Q8NA42 475 aa8□□□□□ -1.13
CCM2-208ENST00000476594 OSR1Q8TAX0 266 aaPredicted RBP8□□□□□ -1.13
CCM2-208ENST00000476594 NUDCD2Q8WVJ2 157 aa8□□□□□ -1.13
CCM2-208ENST00000476594 ARPC1AQ92747 370 aa8□□□□□ -1.13
CCM2-208ENST00000476594 BORCS5Q969J3 196 aa8□□□□□ -1.13
CCM2-208ENST00000476594 S100A16Q96FQ6 103 aaKnown RBP8□□□□□ -1.13
CCM2-208ENST00000476594 P2RX4Q99571 388 aa8□□□□□ -1.13
CCM2-208ENST00000476594 SLA2Q9H6Q3 261 aa8□□□□□ -1.13
CCM2-208ENST00000476594 ANXA10Q9UJ72 324 aa8□□□□□ -1.13
CCM2-208ENST00000476594 OR2W1Q9Y3N9 320 aa8□□□□□ -1.13
CCM2-208ENST00000476594 H3BUA1 57 aa7.99□□□□□ -1.13
CCM2-208ENST00000476594 ARPC1BO15143 372 aaKnown RBP7.99□□□□□ -1.13
CCM2-208ENST00000476594 SLC25A17O43808 307 aa7.99□□□□□ -1.13
CCM2-208ENST00000476594 ACTL6BO94805 426 aa7.99□□□□□ -1.13
CCM2-208ENST00000476594 CA2P00918 260 aa7.99□□□□□ -1.13
CCM2-208ENST00000476594 IGLV1-40P01703 118 aa7.99□□□□□ -1.13
CCM2-208ENST00000476594 IGKV1-16P04430 117 aa7.99□□□□□ -1.13
CCM2-208ENST00000476594 RAB9AP51151 201 aa7.99□□□□□ -1.13
CCM2-208ENST00000476594 RUNX1Q01196 453 aa7.99□□□□□ -1.13
CCM2-208ENST00000476594 TMEM177Q53S58 311 aa7.99□□□□□ -1.13
CCM2-208ENST00000476594 UBE2NLQ5JXB2 153 aa7.99□□□□□ -1.13
CCM2-208ENST00000476594 C9orf66Q5T8R8 295 aa7.99□□□□□ -1.13
CCM2-208ENST00000476594 ETV3LQ6ZN32 361 aa7.99□□□□□ -1.13
CCM2-208ENST00000476594 MINDY2Q8NBR6 621 aa7.99□□□□□ -1.13
CCM2-208ENST00000476594 BEST4Q8NFU0 473 aa7.99□□□□□ -1.13
CCM2-208ENST00000476594 RITA1Q96K30 269 aa7.99□□□□□ -1.13
CCM2-208ENST00000476594 CLCC1Q96S66 551 aa7.99□□□□□ -1.13
CCM2-208ENST00000476594 HSD17B10Q99714 261 aaKnown RBP7.99□□□□□ -1.13
CCM2-208ENST00000476594 IFT46Q9NQC8 304 aa7.99□□□□□ -1.13
CCM2-208ENST00000476594 A3GALT2U3KPV4 340 aa7.99□□□□□ -1.13
CCM2-208ENST00000476594 G3V318 75 aa7.98□□□□□ -1.13
CCM2-208ENST00000476594 RAMP3O60896 148 aa7.98□□□□□ -1.13
CCM2-208ENST00000476594 PROP1O75360 226 aa7.98□□□□□ -1.13
CCM2-208ENST00000476594 HLA-DQB1P01920 261 aa7.98□□□□□ -1.13
CCM2-208ENST00000476594 CLEC2LP0C7M8 214 aa7.98□□□□□ -1.13
CCM2-208ENST00000476594 DUTP33316 252 aaKnown RBP7.98□□□□□ -1.13
CCM2-208ENST00000476594 KIR2DS2P43631 304 aa7.98□□□□□ -1.13
CCM2-208ENST00000476594 INSL3P51460 131 aa7.98□□□□□ -1.13
CCM2-208ENST00000476594 GNB1P62873 340 aa7.98□□□□□ -1.13
CCM2-208ENST00000476594 ZNF616Q08AN1 781 aa7.98□□□□□ -1.13
CCM2-208ENST00000476594 FXYD3Q14802 87 aa7.98□□□□□ -1.13
CCM2-208ENST00000476594 KCTD9Q7L273 389 aa7.98□□□□□ -1.13
CCM2-208ENST00000476594 ZNF491Q8N8L2 437 aa7.98□□□□□ -1.13
CCM2-208ENST00000476594 TEX45Q8NA69 505 aa7.98□□□□□ -1.13
CCM2-208ENST00000476594 BVESQ8NE79 360 aa7.98□□□□□ -1.13
CCM2-208ENST00000476594 OR11H1Q8NG94 326 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms