RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 GNG2P59768 71 aa16.53■□□□□ 0.24
LIME1-204ENST00000476183 RPS16P62249 146 aaKnown RBP16.53■□□□□ 0.24
LIME1-204ENST00000476183 CX3CL1P78423 397 aa16.53■□□□□ 0.24
LIME1-204ENST00000476183 PITPNAQ00169 270 aa16.53■□□□□ 0.24
LIME1-204ENST00000476183 PDPNQ86YL7 162 aa16.53■□□□□ 0.24
LIME1-204ENST00000476183 RAX2Q96IS3 184 aa16.53■□□□□ 0.24
LIME1-204ENST00000476183 KLK15Q9H2R5 256 aa16.53■□□□□ 0.24
LIME1-204ENST00000476183 SLC35D1Q9NTN3 355 aa16.53■□□□□ 0.24
LIME1-204ENST00000476183 TRAV18A0A075B6X5 111 aa16.52■□□□□ 0.24
LIME1-204ENST00000476183 TRAV41A0A0B4J266 112 aa16.52■□□□□ 0.24
LIME1-204ENST00000476183 APOA2P02652 100 aa16.52■□□□□ 0.24
LIME1-204ENST00000476183 EGR2P11161 476 aaPredicted RBP16.52■□□□□ 0.24
LIME1-204ENST00000476183 RPS19P39019 145 aaKnown RBP16.52■□□□□ 0.24
LIME1-204ENST00000476183 MYCNOSP40205 109 aa16.52■□□□□ 0.24
LIME1-204ENST00000476183 KIAA0141Q14154 515 aaPredicted RBP16.52■□□□□ 0.24
LIME1-204ENST00000476183 PLGLAQ15195 96 aa16.52■□□□□ 0.24
LIME1-204ENST00000476183 DEFB136Q30KP8 78 aa16.52■□□□□ 0.24
LIME1-204ENST00000476183 C19orf54Q5BKX5 351 aa16.52■□□□□ 0.24
LIME1-204ENST00000476183 FOXB2Q5VYV0 432 aa16.52■□□□□ 0.24
LIME1-204ENST00000476183 ZNF660Q6AZW8 331 aaPredicted RBP16.52■□□□□ 0.24
LIME1-204ENST00000476183 MYOZ3Q8TDC0 251 aa16.52■□□□□ 0.24
LIME1-204ENST00000476183 RCC1LQ96I51 464 aaKnown RBP16.52■□□□□ 0.24
LIME1-204ENST00000476183 CLCC1Q96S66 551 aa16.52■□□□□ 0.24
LIME1-204ENST00000476183 TPSG1Q9NRR2 321 aa16.52■□□□□ 0.24
LIME1-204ENST00000476183 METTL1Q9UBP6 276 aaKnown RBP16.52■□□□□ 0.24
LIME1-204ENST00000476183 SPATA2Q9UM82 520 aa16.52■□□□□ 0.24
LIME1-204ENST00000476183 RBM7Q9Y580 266 aaKnown RBP16.52■□□□□ 0.24
LIME1-204ENST00000476183 J3QRK9 145 aa16.51■□□□□ 0.23
LIME1-204ENST00000476183 IGLV1-40P01703 118 aa16.51■□□□□ 0.23
LIME1-204ENST00000476183 NFYAP23511 347 aaPredicted RBP16.51■□□□□ 0.23
LIME1-204ENST00000476183 CRIP2P52943 208 aaPredicted RBP16.51■□□□□ 0.23
LIME1-204ENST00000476183 MINDY2Q8NBR6 621 aa16.51■□□□□ 0.23
LIME1-204ENST00000476183 FLYWCH2Q96CP2 140 aaKnown RBP16.51■□□□□ 0.23
LIME1-204ENST00000476183 TSNAXQ99598 290 aaKnown RBP16.51■□□□□ 0.23
LIME1-204ENST00000476183 CCL24O00175 119 aa16.5■□□□□ 0.23
LIME1-204ENST00000476183 SPDEFO95238 335 aa16.5■□□□□ 0.23
LIME1-204ENST00000476183 IGLV2-23P01705 113 aa16.5■□□□□ 0.23
LIME1-204ENST00000476183 ECSCRQ19T08 205 aa16.5■□□□□ 0.23
LIME1-204ENST00000476183 CNIH2Q6PI25 160 aa16.5■□□□□ 0.23
LIME1-204ENST00000476183 NECAP2Q9NVZ3 263 aa16.5■□□□□ 0.23
LIME1-204ENST00000476183 ANXA10Q9UJ72 324 aa16.5■□□□□ 0.23
LIME1-204ENST00000476183 A0A0A6YYH2 397 aa16.49■□□□□ 0.23
LIME1-204ENST00000476183 A6NJ64 397 aa16.49■□□□□ 0.23
LIME1-204ENST00000476183 SLC25A17O43808 307 aa16.49■□□□□ 0.23
LIME1-204ENST00000476183 SOX15O60248 233 aa16.49■□□□□ 0.23
LIME1-204ENST00000476183 TMEM127O75204 238 aa16.49■□□□□ 0.23
LIME1-204ENST00000476183 CA2P00918 260 aa16.49■□□□□ 0.23
LIME1-204ENST00000476183 CTXN2P0C2S0 81 aa16.49■□□□□ 0.23
LIME1-204ENST00000476183 PTHLHP12272 177 aa16.49■□□□□ 0.23
LIME1-204ENST00000476183 DUTP33316 252 aaKnown RBP16.49■□□□□ 0.23
LIME1-204ENST00000476183 GVQW1Q8N7I0 195 aa16.49■□□□□ 0.23
LIME1-204ENST00000476183 BVESQ8NE79 360 aa16.49■□□□□ 0.23
LIME1-204ENST00000476183 DDB2Q92466 427 aa16.49■□□□□ 0.23
LIME1-204ENST00000476183 FAM103A1Q9BTL3 118 aaKnown RBP16.49■□□□□ 0.23
LIME1-204ENST00000476183 AUNIPQ9H7T9 357 aa16.49■□□□□ 0.23
LIME1-204ENST00000476183 AURKAIP1Q9NWT8 199 aaPredicted RBP16.49■□□□□ 0.23
LIME1-204ENST00000476183 OR2W1Q9Y3N9 320 aa16.49■□□□□ 0.23
LIME1-204ENST00000476183 NUBP2Q9Y5Y2 271 aa16.49■□□□□ 0.23
LIME1-204ENST00000476183 A3GALT2U3KPV4 340 aa16.49■□□□□ 0.23
LIME1-204ENST00000476183 IGKV1D-13A0A0B4J2D9 117 aa16.48■□□□□ 0.23
LIME1-204ENST00000476183 SRRM4A7MD48 611 aaKnown RBP16.48■□□□□ 0.23
LIME1-204ENST00000476183 LINC00473A8K010 186 aa16.48■□□□□ 0.23
LIME1-204ENST00000476183 HLA-DQB1P01920 261 aa16.48■□□□□ 0.23
LIME1-204ENST00000476183 CRYGBP07316 175 aa16.48■□□□□ 0.23
LIME1-204ENST00000476183 IGKV1-13P0DP09 117 aa16.48■□□□□ 0.23
LIME1-204ENST00000476183 SSBP2P81877 361 aaPredicted RBP16.48■□□□□ 0.23
LIME1-204ENST00000476183 ZNF562Q6V9R5 426 aa16.48■□□□□ 0.23
LIME1-204ENST00000476183 CROCCP3Q8IVE0 287 aa16.48■□□□□ 0.23
LIME1-204ENST00000476183 ZNF491Q8N8L2 437 aa16.48■□□□□ 0.23
LIME1-204ENST00000476183 C4orf3Q8WVX3 66 aa16.48■□□□□ 0.23
LIME1-204ENST00000476183 FUNDC2Q9BWH2 189 aa16.48■□□□□ 0.23
LIME1-204ENST00000476183 GNB4Q9HAV0 340 aa16.48■□□□□ 0.23
LIME1-204ENST00000476183 ARPC1BO15143 372 aaKnown RBP16.47■□□□□ 0.23
LIME1-204ENST00000476183 DUS4LO95620 317 aaKnown RBP16.47■□□□□ 0.23
LIME1-204ENST00000476183 IGLV2-14P01704 120 aa16.47■□□□□ 0.23
LIME1-204ENST00000476183 SMIM18P0DKX4 95 aa16.47■□□□□ 0.23
LIME1-204ENST00000476183 RAB9AP51151 201 aa16.47■□□□□ 0.23
LIME1-204ENST00000476183 NCS1P62166 190 aa16.47■□□□□ 0.23
LIME1-204ENST00000476183 TMEM177Q53S58 311 aa16.47■□□□□ 0.23
LIME1-204ENST00000476183 TMEM65Q6PI78 240 aa16.47■□□□□ 0.23
LIME1-204ENST00000476183 PPP1R27Q86WC6 154 aa16.47■□□□□ 0.23
LIME1-204ENST00000476183 ZNF645Q8N7E2 425 aa16.47■□□□□ 0.23
LIME1-204ENST00000476183 OR13F1Q8NGS4 319 aa16.47■□□□□ 0.23
LIME1-204ENST00000476183 ABHD5Q8WTS1 349 aa16.47■□□□□ 0.23
LIME1-204ENST00000476183 CASTOR1Q8WTX7 329 aa16.47■□□□□ 0.23
LIME1-204ENST00000476183 HARBI1Q96MB7 349 aa16.47■□□□□ 0.23
LIME1-204ENST00000476183 DIABLOQ9NR28 239 aa16.47■□□□□ 0.23
LIME1-204ENST00000476183 TNCP24821 2201 aa16.47■□□□□ 0.23
LIME1-204ENST00000476183 A0A1W2PN81 502 aa16.46■□□□□ 0.23
LIME1-204ENST00000476183 TUSC2O75896 110 aa16.46■□□□□ 0.23
LIME1-204ENST00000476183 CHRNA7P36544 502 aa16.46■□□□□ 0.23
LIME1-204ENST00000476183 LGALS7P47929 136 aa16.46■□□□□ 0.23
LIME1-204ENST00000476183 LUMP51884 338 aaPredicted RBP16.46■□□□□ 0.23
LIME1-204ENST00000476183 KRTAP10-11P60412 298 aa16.46■□□□□ 0.23
LIME1-204ENST00000476183 TAGLNQ01995 201 aaKnown RBP16.46■□□□□ 0.23
LIME1-204ENST00000476183 PJVKQ0ZLH3 352 aa16.46■□□□□ 0.23
LIME1-204ENST00000476183 REC114Q7Z4M0 266 aa16.46■□□□□ 0.23
LIME1-204ENST00000476183 HOGA1Q86XE5 327 aa16.46■□□□□ 0.23
LIME1-204ENST00000476183 BEST4Q8NFU0 473 aa16.46■□□□□ 0.23
LIME1-204ENST00000476183 SLC25A46Q96AG3 418 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms