RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 TEX13DA0A0J9YY54 714 aaPredicted RBP3.48□□□□□ -1.85
VPS13D-206ENST00000476045 FAM230AA0A1W2PPH8 454 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 TMEM218A2RU14 115 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 RAB19A4D1S5 217 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 FAM90A18PA6NE21 464 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 FAM90A16PA6NEW6 464 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 DNAJC9-AS1A6NH13 148 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 FAM90A9PA6NNJ1 464 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 CEACAM18A8MTB9 384 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 FOXI3A8MTJ6 420 aaPredicted RBP3.48□□□□□ -1.85
VPS13D-206ENST00000476045 ZNF705EA8MWA4 302 aaPredicted RBP3.48□□□□□ -1.85
VPS13D-206ENST00000476045 FAM90A5PA8MXJ8 464 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 F8VVB4 439 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 F8VWA3 439 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 F8W036 122 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 TMEM178BH3BS89 294 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 WNT9BO14905 357 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 AGPAT2O15120 278 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 FGF16O43320 207 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 XRCC2O43543 280 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 NDUFA2O43678 99 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 ANGPTL7O43827 346 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 APOC1P02654 83 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 FAM90A15PP0C7V4 464 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 FAM90A14PP0C7W9 464 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 CTRB1P17538 263 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 RCC1P18754 421 aaPredicted RBP3.48□□□□□ -1.85
VPS13D-206ENST00000476045 PRTN3P24158 256 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 RBMXP38159 391 aaKnown RBP3.48□□□□□ -1.85
VPS13D-206ENST00000476045 CD200P41217 278 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 NPBWR1P48145 328 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 TAS2R46P59540 309 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 GNB2P62879 340 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 SUPT4H1P63272 117 aaKnown RBP3.48□□□□□ -1.85
VPS13D-206ENST00000476045 HIST1H3AP68431 136 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 LCN2P80188 198 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 CYCSP99999 105 aaKnown RBP3.48□□□□□ -1.85
VPS13D-206ENST00000476045 RBM39Q14498 530 aaKnown RBP3.48□□□□□ -1.85
VPS13D-206ENST00000476045 KISS1Q15726 138 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 UBE2V2Q15819 145 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 GUCA2BQ16661 112 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 KRTAP27-1Q3LI81 207 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 AKIRIN2Q53H80 203 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 AWAT1Q58HT5 328 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 HIST2H3PS2Q5TEC6 136 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 GPR157Q5UAW9 335 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 RPL7L1Q6DKI1 246 aaKnown RBP3.48□□□□□ -1.85
VPS13D-206ENST00000476045 CTRB2Q6GPI1 263 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 TMEM88Q6PEY1 159 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 HAGHLQ6PII5 290 aaPredicted RBP3.48□□□□□ -1.85
VPS13D-206ENST00000476045 COLCA1Q6ZS62 124 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 HIST2H3AQ71DI3 136 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 MRPL21Q7Z2W9 205 aaKnown RBP3.48□□□□□ -1.85
VPS13D-206ENST00000476045 C6orf201Q7Z4U5 140 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 CBLN2Q8IUK8 224 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 BATF2Q8N1L9 274 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 ARRDC1Q8N5I2 433 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 DEFB108BQ8NET1 73 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 OR8G5Q8NG78 346 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 OR2AE1Q8NHA4 323 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 STOML3Q8TAV4 291 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 DYRK2Q92630 601 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 GTF3AQ92664 365 aaKnown RBP3.48□□□□□ -1.85
VPS13D-206ENST00000476045 EMG1Q92979 244 aaKnown RBP3.48□□□□□ -1.85
VPS13D-206ENST00000476045 ARL11Q969Q4 196 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 SGK3Q96BR1 496 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 PHYHIPLQ96FC7 376 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 BSCL2Q96G97 398 aaPredicted RBP3.48□□□□□ -1.85
VPS13D-206ENST00000476045 SCGB3A2Q96PL1 93 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 NUDT16L1Q9BRJ7 211 aaKnown RBP3.48□□□□□ -1.85
VPS13D-206ENST00000476045 ZNF2Q9BSG1 426 aaPredicted RBP3.48□□□□□ -1.85
VPS13D-206ENST00000476045 FAAP24Q9BTP7 215 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 C1QTNF5Q9BXJ0 243 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 SMIM3Q9BZL3 60 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 NMES1Q9C002 83 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 DNTTIP1Q9H147 329 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 HRH4Q9H3N8 390 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 RAB18Q9NP72 206 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 ZNF581Q9P0T4 197 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 CLN8Q9UBY8 286 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 ZNF391Q9UJN7 358 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 C14orf166Q9Y224 244 aaKnown RBP3.48□□□□□ -1.85
VPS13D-206ENST00000476045 FAM96BQ9Y3D0 163 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 MMP24Q9Y5R2 645 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 POMT1Q9Y6A1 747 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 V9GYS6 101 aa3.48□□□□□ -1.85
VPS13D-206ENST00000476045 TRBV6-7A0A0A0MS04 114 aa3.47□□□□□ -1.85
VPS13D-206ENST00000476045 TRAV38-1A0A0B4J264 116 aa3.47□□□□□ -1.85
VPS13D-206ENST00000476045 TRAV40A0A0B4J280 105 aa3.47□□□□□ -1.85
VPS13D-206ENST00000476045 PGPEP1LA6NFU8 196 aa3.47□□□□□ -1.85
VPS13D-206ENST00000476045 PCP4L1A6NKN8 68 aa3.47□□□□□ -1.85
VPS13D-206ENST00000476045 DHRS7CA6NNS2 312 aa3.47□□□□□ -1.85
VPS13D-206ENST00000476045 M0R135 149 aa3.47□□□□□ -1.85
VPS13D-206ENST00000476045 MED6O75586 246 aa3.47□□□□□ -1.85
VPS13D-206ENST00000476045 DHRS3O75911 302 aa3.47□□□□□ -1.85
VPS13D-206ENST00000476045 ATG12O94817 140 aa3.47□□□□□ -1.85
VPS13D-206ENST00000476045 PTBP3O95758 552 aaKnown RBP3.47□□□□□ -1.85
VPS13D-206ENST00000476045 NGFP01138 241 aa3.47□□□□□ -1.85
VPS13D-206ENST00000476045 LCATP04180 440 aa3.47□□□□□ -1.85
VPS13D-206ENST00000476045 LIPFP07098 398 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms