RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 WASHC3Q9Y3C0 194 aa5.39□□□□□ -1.55
HDAC3-207ENST00000475549 SMAD5-AS1Q9Y6J3 95 aa5.39□□□□□ -1.55
HDAC3-207ENST00000475549 IGKV1D-8A0A087WSZ0 117 aa5.38□□□□□ -1.55
HDAC3-207ENST00000475549 A0A0B4J203 849 aa5.38□□□□□ -1.55
HDAC3-207ENST00000475549 RAB27BO00194 218 aa5.38□□□□□ -1.55
HDAC3-207ENST00000475549 HSPA12AO43301 675 aa5.38□□□□□ -1.55
HDAC3-207ENST00000475549 SLC25A17O43808 307 aa5.38□□□□□ -1.55
HDAC3-207ENST00000475549 HSPB1P04792 205 aaKnown RBP5.38□□□□□ -1.55
HDAC3-207ENST00000475549 GSTT2P0CG29 244 aa5.38□□□□□ -1.55
HDAC3-207ENST00000475549 GSTT2BP0CG30 244 aa5.38□□□□□ -1.55
HDAC3-207ENST00000475549 GP9P14770 177 aa5.38□□□□□ -1.55
HDAC3-207ENST00000475549 CALRP27797 417 aaKnown RBP5.38□□□□□ -1.55
HDAC3-207ENST00000475549 RPS16P62249 146 aaKnown RBP5.38□□□□□ -1.55
HDAC3-207ENST00000475549 TMEM267Q0VDI3 215 aaPredicted RBP5.38□□□□□ -1.55
HDAC3-207ENST00000475549 MLLT11Q13015 90 aaPredicted RBP5.38□□□□□ -1.55
HDAC3-207ENST00000475549 FXYD3Q14802 87 aa5.38□□□□□ -1.55
HDAC3-207ENST00000475549 PLGLAQ15195 96 aa5.38□□□□□ -1.55
HDAC3-207ENST00000475549 RAB11BQ15907 218 aa5.38□□□□□ -1.55
HDAC3-207ENST00000475549 IGSF11Q5DX21 431 aa5.38□□□□□ -1.55
HDAC3-207ENST00000475549 NR2C2APQ86WQ0 139 aa5.38□□□□□ -1.55
HDAC3-207ENST00000475549 OR5T1Q8NG75 326 aa5.38□□□□□ -1.55
HDAC3-207ENST00000475549 EDARADDQ8WWZ3 215 aa5.38□□□□□ -1.55
HDAC3-207ENST00000475549 FLYWCH2Q96CP2 140 aaKnown RBP5.38□□□□□ -1.55
HDAC3-207ENST00000475549 MGLLQ99685 303 aa5.38□□□□□ -1.55
HDAC3-207ENST00000475549 CMSS1Q9BQ75 279 aaKnown RBP5.38□□□□□ -1.55
HDAC3-207ENST00000475549 URM1Q9BTM9 101 aaKnown RBP5.38□□□□□ -1.55
HDAC3-207ENST00000475549 PLGRKTQ9HBL7 147 aa5.38□□□□□ -1.55
HDAC3-207ENST00000475549 C12orf4Q9NQ89 552 aa5.38□□□□□ -1.55
HDAC3-207ENST00000475549 SDHAF2Q9NX18 166 aa5.38□□□□□ -1.55
HDAC3-207ENST00000475549 GAR1Q9NY12 217 aaKnown RBP5.38□□□□□ -1.55
HDAC3-207ENST00000475549 SCN3BQ9NY72 215 aa5.38□□□□□ -1.55
HDAC3-207ENST00000475549 ZNF230Q9UIE0 474 aaPredicted RBP5.38□□□□□ -1.55
HDAC3-207ENST00000475549 ADAM30Q9UKF2 790 aa5.38□□□□□ -1.55
HDAC3-207ENST00000475549 ELF5Q9UKW6 265 aaPredicted RBP5.38□□□□□ -1.55
HDAC3-207ENST00000475549 RYR2Q92736 4967 aa5.37□□□□□ -1.55
HDAC3-207ENST00000475549 TRBV6-7A0A0A0MS04 114 aa5.37□□□□□ -1.55
HDAC3-207ENST00000475549 A6NJY4 79 aa5.37□□□□□ -1.55
HDAC3-207ENST00000475549 M0R1X1 148 aa5.37□□□□□ -1.55
HDAC3-207ENST00000475549 FABP7O15540 132 aa5.37□□□□□ -1.55
HDAC3-207ENST00000475549 DENRO43583 198 aaKnown RBP5.37□□□□□ -1.55
HDAC3-207ENST00000475549 RGS10O43665 173 aa5.37□□□□□ -1.55
HDAC3-207ENST00000475549 LY86O95711 162 aa5.37□□□□□ -1.55
HDAC3-207ENST00000475549 IGLV1-51P01701 117 aa5.37□□□□□ -1.55
HDAC3-207ENST00000475549 TRBV12-3P01733 135 aa5.37□□□□□ -1.55
HDAC3-207ENST00000475549 TFAP2AP05549 437 aa5.37□□□□□ -1.55
HDAC3-207ENST00000475549 FCGR3AP08637 254 aa5.37□□□□□ -1.55
HDAC3-207ENST00000475549 OR8U9P0C7N5 309 aa5.37□□□□□ -1.55
HDAC3-207ENST00000475549 GNB3P16520 340 aa5.37□□□□□ -1.55
HDAC3-207ENST00000475549 TPPP2P59282 170 aa5.37□□□□□ -1.55
HDAC3-207ENST00000475549 DEFA5Q01523 94 aa5.37□□□□□ -1.55
HDAC3-207ENST00000475549 KLF5Q13887 457 aaPredicted RBP5.37□□□□□ -1.55
HDAC3-207ENST00000475549 CASC10Q5T4H9 136 aa5.37□□□□□ -1.55
HDAC3-207ENST00000475549 HES5Q5TA89 166 aa5.37□□□□□ -1.55
HDAC3-207ENST00000475549 PYHIN1Q6K0P9 492 aa5.37□□□□□ -1.55
HDAC3-207ENST00000475549 PRSS48Q7RTY5 328 aa5.37□□□□□ -1.55
HDAC3-207ENST00000475549 PDPNQ86YL7 162 aa5.37□□□□□ -1.55
HDAC3-207ENST00000475549 TCTEX1D1Q8N7M0 179 aa5.37□□□□□ -1.55
HDAC3-207ENST00000475549 OR56B1Q8NGI3 324 aa5.37□□□□□ -1.55
HDAC3-207ENST00000475549 OR4A4PQ8NGN8 299 aa5.37□□□□□ -1.55
HDAC3-207ENST00000475549 GRPEL2Q8TAA5 225 aa5.37□□□□□ -1.55
HDAC3-207ENST00000475549 ABHD5Q8WTS1 349 aa5.37□□□□□ -1.55
HDAC3-207ENST00000475549 MAFIPQ8WZ33 124 aa5.37□□□□□ -1.55
HDAC3-207ENST00000475549 ZNF221Q9UK13 617 aa5.37□□□□□ -1.55
HDAC3-207ENST00000475549 MGAT4AQ9UM21 535 aa5.37□□□□□ -1.55
HDAC3-207ENST00000475549 TPRKBQ9Y3C4 175 aa5.37□□□□□ -1.55
HDAC3-207ENST00000475549 V9GY05 133 aa5.37□□□□□ -1.55
HDAC3-207ENST00000475549 ANKRD34BA5PLL1 514 aa5.36□□□□□ -1.55
HDAC3-207ENST00000475549 IFITM5A6NNB3 132 aa5.36□□□□□ -1.55
HDAC3-207ENST00000475549 LINC00473A8K010 186 aa5.36□□□□□ -1.55
HDAC3-207ENST00000475549 C3orf84H3BNL1 204 aa5.36□□□□□ -1.55
HDAC3-207ENST00000475549 MFNGO00587 321 aa5.36□□□□□ -1.55
HDAC3-207ENST00000475549 BET1O15155 118 aa5.36□□□□□ -1.55
HDAC3-207ENST00000475549 ARL6IP5O75915 188 aa5.36□□□□□ -1.55
HDAC3-207ENST00000475549 SPDEFO95238 335 aa5.36□□□□□ -1.55
HDAC3-207ENST00000475549 BRI3O95415 125 aa5.36□□□□□ -1.55
HDAC3-207ENST00000475549 IGLV2-14P01704 120 aa5.36□□□□□ -1.55
HDAC3-207ENST00000475549 TRGV3P03979 118 aa5.36□□□□□ -1.55
HDAC3-207ENST00000475549 APELAP0DMC3 54 aa5.36□□□□□ -1.55
HDAC3-207ENST00000475549 PSMA1P25786 263 aaKnown RBP5.36□□□□□ -1.55
HDAC3-207ENST00000475549 LGALS7P47929 136 aa5.36□□□□□ -1.55
HDAC3-207ENST00000475549 SMCPP49901 116 aaPredicted RBP5.36□□□□□ -1.55
HDAC3-207ENST00000475549 DYRK1AQ13627 763 aa5.36□□□□□ -1.55
HDAC3-207ENST00000475549 TMEM177Q53S58 311 aa5.36□□□□□ -1.55
HDAC3-207ENST00000475549 POC5Q8NA72 575 aa5.36□□□□□ -1.55
HDAC3-207ENST00000475549 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.36□□□□□ -1.55
HDAC3-207ENST00000475549 OR10R2Q8NGX6 335 aa5.36□□□□□ -1.55
HDAC3-207ENST00000475549 DDB2Q92466 427 aa5.36□□□□□ -1.55
HDAC3-207ENST00000475549 RAB3CQ96E17 227 aa5.36□□□□□ -1.55
HDAC3-207ENST00000475549 RCHY1Q96PM5 261 aa5.36□□□□□ -1.55
HDAC3-207ENST00000475549 TSNAXQ99598 290 aaKnown RBP5.36□□□□□ -1.55
HDAC3-207ENST00000475549 THAP7Q9BT49 309 aaPredicted RBP5.36□□□□□ -1.55
HDAC3-207ENST00000475549 CABLES2Q9BTV7 478 aa5.36□□□□□ -1.55
HDAC3-207ENST00000475549 CCDC90BQ9GZT6 254 aa5.36□□□□□ -1.55
HDAC3-207ENST00000475549 OR2D2Q9H210 308 aa5.36□□□□□ -1.55
HDAC3-207ENST00000475549 VCXQ9H320 206 aa5.36□□□□□ -1.55
HDAC3-207ENST00000475549 SLA2Q9H6Q3 261 aa5.36□□□□□ -1.55
HDAC3-207ENST00000475549 RANGRFQ9HD47 186 aaPredicted RBP5.36□□□□□ -1.55
HDAC3-207ENST00000475549 ACOT13Q9NPJ3 140 aa5.36□□□□□ -1.55
HDAC3-207ENST00000475549 SLC35D1Q9NTN3 355 aa5.36□□□□□ -1.55
HDAC3-207ENST00000475549 C19orf73Q9NVV2 129 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms