RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 PIGPP57054 158 aa12.65□□□□□ -0.38
CPSF3-203ENST00000475482 RND3P61587 244 aa12.65□□□□□ -0.38
CPSF3-203ENST00000475482 PPP1R1AQ13522 171 aa12.65□□□□□ -0.38
CPSF3-203ENST00000475482 LY6G6FQ5SQ64 297 aa12.65□□□□□ -0.38
CPSF3-203ENST00000475482 C12orf45Q8N5I9 185 aaPredicted RBP12.65□□□□□ -0.38
CPSF3-203ENST00000475482 ADAD2Q8NCV1 583 aaKnown RBP12.65□□□□□ -0.38
CPSF3-203ENST00000475482 COQ8AQ8NI60 647 aa12.65□□□□□ -0.38
CPSF3-203ENST00000475482 RFESDQ8TAC1 157 aa12.65□□□□□ -0.38
CPSF3-203ENST00000475482 WFDC12Q8WWY7 111 aa12.65□□□□□ -0.38
CPSF3-203ENST00000475482 SLC2A9Q9NRM0 540 aa12.65□□□□□ -0.38
CPSF3-203ENST00000475482 A0A0B4J2A0 478 aa12.64□□□□□ -0.39
CPSF3-203ENST00000475482 CRYM-AS1A6NIL9 109 aa12.64□□□□□ -0.39
CPSF3-203ENST00000475482 ITGB1BP1O14713 200 aa12.64□□□□□ -0.39
CPSF3-203ENST00000475482 SFT2D2O95562 160 aa12.64□□□□□ -0.39
CPSF3-203ENST00000475482 PI3P19957 117 aa12.64□□□□□ -0.39
CPSF3-203ENST00000475482 CD34P28906 385 aa12.64□□□□□ -0.39
CPSF3-203ENST00000475482 GNRHRP30968 328 aa12.64□□□□□ -0.39
CPSF3-203ENST00000475482 ZNF273Q14593 569 aa12.64□□□□□ -0.39
CPSF3-203ENST00000475482 C17orf58Q2M2W7 97 aa12.64□□□□□ -0.39
CPSF3-203ENST00000475482 Q3ZCU0 254 aa12.64□□□□□ -0.39
CPSF3-203ENST00000475482 LIN54Q6MZP7 749 aa12.64□□□□□ -0.39
CPSF3-203ENST00000475482 KCTD9Q7L273 389 aa12.64□□□□□ -0.39
CPSF3-203ENST00000475482 BEND2Q8NDZ0 799 aa12.64□□□□□ -0.39
CPSF3-203ENST00000475482 OR2AK2Q8NG84 335 aa12.64□□□□□ -0.39
CPSF3-203ENST00000475482 OR52L2PQ8NGH6 319 aa12.64□□□□□ -0.39
CPSF3-203ENST00000475482 UBALD1Q8TB05 177 aa12.64□□□□□ -0.39
CPSF3-203ENST00000475482 MITD1Q8WV92 249 aa12.64□□□□□ -0.39
CPSF3-203ENST00000475482 RTN4IP1Q8WWV3 396 aaPredicted RBP12.64□□□□□ -0.39
CPSF3-203ENST00000475482 MEGF9Q9H1U4 602 aa12.64□□□□□ -0.39
CPSF3-203ENST00000475482 SHPKQ9UHJ6 478 aa12.64□□□□□ -0.39
CPSF3-203ENST00000475482 VPREB3Q9UKI3 123 aa12.64□□□□□ -0.39
CPSF3-203ENST00000475482 KIAA2026Q5HYC2 2103 aa12.64□□□□□ -0.39
CPSF3-203ENST00000475482 A0A1W2PRD5 423 aa12.63□□□□□ -0.39
CPSF3-203ENST00000475482 A0A1W2PRF3 423 aa12.63□□□□□ -0.39
CPSF3-203ENST00000475482 A0A1W2PRM7 423 aa12.63□□□□□ -0.39
CPSF3-203ENST00000475482 C17orf98A8MV24 154 aa12.63□□□□□ -0.39
CPSF3-203ENST00000475482 RBP4P02753 201 aa12.63□□□□□ -0.39
CPSF3-203ENST00000475482 OR8U9P0C7N5 309 aa12.63□□□□□ -0.39
CPSF3-203ENST00000475482 PPP1CCP36873 323 aaKnown RBP12.63□□□□□ -0.39
CPSF3-203ENST00000475482 SRPXP78539 464 aa12.63□□□□□ -0.39
CPSF3-203ENST00000475482 AANATQ16613 207 aa12.63□□□□□ -0.39
CPSF3-203ENST00000475482 MORN2Q502X0 79 aa12.63□□□□□ -0.39
CPSF3-203ENST00000475482 HEPN1Q6WQI6 88 aa12.63□□□□□ -0.39
CPSF3-203ENST00000475482 C5orf24Q7Z6I8 188 aa12.63□□□□□ -0.39
CPSF3-203ENST00000475482 BVESQ8NE79 360 aa12.63□□□□□ -0.39
CPSF3-203ENST00000475482 OR52B4Q8NGK2 314 aa12.63□□□□□ -0.39
CPSF3-203ENST00000475482 OR8U1Q8NH10 309 aa12.63□□□□□ -0.39
CPSF3-203ENST00000475482 OR5R1Q8NH85 324 aa12.63□□□□□ -0.39
CPSF3-203ENST00000475482 LINC01006Q8NI28 216 aa12.63□□□□□ -0.39
CPSF3-203ENST00000475482 C17orf50Q8WW18 174 aa12.63□□□□□ -0.39
CPSF3-203ENST00000475482 ASB13Q8WXK3 278 aa12.63□□□□□ -0.39
CPSF3-203ENST00000475482 TMEM230Q96A57 120 aa12.63□□□□□ -0.39
CPSF3-203ENST00000475482 GALNT14Q96FL9 552 aa12.63□□□□□ -0.39
CPSF3-203ENST00000475482 NEURL2Q9BR09 285 aa12.63□□□□□ -0.39
CPSF3-203ENST00000475482 NAA60Q9H7X0 242 aa12.63□□□□□ -0.39
CPSF3-203ENST00000475482 HEXA-AS1Q9H8Q6 139 aa12.63□□□□□ -0.39
CPSF3-203ENST00000475482 GFOD1Q9NXC2 390 aa12.63□□□□□ -0.39
CPSF3-203ENST00000475482 IGKV1D-13A0A0B4J2D9 117 aa12.62□□□□□ -0.39
CPSF3-203ENST00000475482 HSD17B6O14756 317 aa12.62□□□□□ -0.39
CPSF3-203ENST00000475482 TSPAN9O75954 239 aa12.62□□□□□ -0.39
CPSF3-203ENST00000475482 SULT1A3P0DMM9 295 aa12.62□□□□□ -0.39
CPSF3-203ENST00000475482 SULT1A4P0DMN0 295 aa12.62□□□□□ -0.39
CPSF3-203ENST00000475482 IGKV1-13P0DP09 117 aa12.62□□□□□ -0.39
CPSF3-203ENST00000475482 CCL3L1P16619 93 aa12.62□□□□□ -0.39
CPSF3-203ENST00000475482 LOXL3P58215 753 aa12.62□□□□□ -0.39
CPSF3-203ENST00000475482 PROK1P58294 105 aa12.62□□□□□ -0.39
CPSF3-203ENST00000475482 LTC4SQ16873 150 aa12.62□□□□□ -0.39
CPSF3-203ENST00000475482 PHLDA2Q53GA4 152 aa12.62□□□□□ -0.39
CPSF3-203ENST00000475482 Q6ZSV7 163 aa12.62□□□□□ -0.39
CPSF3-203ENST00000475482 TCF23Q7RTU1 214 aa12.62□□□□□ -0.39
CPSF3-203ENST00000475482 ZNF645Q8N7E2 425 aa12.62□□□□□ -0.39
CPSF3-203ENST00000475482 UXS1Q8NBZ7 420 aa12.62□□□□□ -0.39
CPSF3-203ENST00000475482 CASTOR1Q8WTX7 329 aa12.62□□□□□ -0.39
CPSF3-203ENST00000475482 CITED1Q99966 193 aa12.62□□□□□ -0.39
CPSF3-203ENST00000475482 C16orf95Q9H693 158 aa12.62□□□□□ -0.39
CPSF3-203ENST00000475482 CCL28Q9NRJ3 127 aa12.62□□□□□ -0.39
CPSF3-203ENST00000475482 ZNF221Q9UK13 617 aa12.62□□□□□ -0.39
CPSF3-203ENST00000475482 MPPED1O15442 326 aa12.61□□□□□ -0.39
CPSF3-203ENST00000475482 NFYBP25208 207 aa12.61□□□□□ -0.39
CPSF3-203ENST00000475482 KRTAP10-3P60369 221 aa12.61□□□□□ -0.39
CPSF3-203ENST00000475482 ERVFRD-1P60508 538 aa12.61□□□□□ -0.39
CPSF3-203ENST00000475482 GNMTQ14749 295 aa12.61□□□□□ -0.39
CPSF3-203ENST00000475482 FCN2Q15485 313 aa12.61□□□□□ -0.39
CPSF3-203ENST00000475482 ZNF818PQ6ZRF7 136 aa12.61□□□□□ -0.39
CPSF3-203ENST00000475482 MGAT4CQ9UBM8 478 aa12.61□□□□□ -0.39
CPSF3-203ENST00000475482 VWFP04275 2813 aa12.6□□□□□ -0.39
CPSF3-203ENST00000475482 IGHV3-43A0A0B4J1X8 118 aa12.6□□□□□ -0.39
CPSF3-203ENST00000475482 C3orf85A0A1B0GTC6 90 aa12.6□□□□□ -0.39
CPSF3-203ENST00000475482 MEX3AA1L020 520 aaKnown RBP12.6□□□□□ -0.39
CPSF3-203ENST00000475482 BTBD17A6NE02 478 aa12.6□□□□□ -0.39
CPSF3-203ENST00000475482 HNRNPCP07910 306 aaKnown RBP eCLIP12.6□□□□□ -0.39
CPSF3-203ENST00000475482 IGHV3-43DP0DP04 118 aa12.6□□□□□ -0.39
CPSF3-203ENST00000475482 GPR12P47775 334 aa12.6□□□□□ -0.39
CPSF3-203ENST00000475482 SUPT4H1P63272 117 aaKnown RBP12.6□□□□□ -0.39
CPSF3-203ENST00000475482 SRSF4Q08170 494 aaKnown RBP12.6□□□□□ -0.39
CPSF3-203ENST00000475482 CATR1Q13166 79 aa12.6□□□□□ -0.39
CPSF3-203ENST00000475482 TBC1D26Q86UD7 250 aa12.6□□□□□ -0.39
CPSF3-203ENST00000475482 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.6□□□□□ -0.39
CPSF3-203ENST00000475482 ABHD14AQ9BUJ0 271 aa12.6□□□□□ -0.39
CPSF3-203ENST00000475482 OR2D2Q9H210 308 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms