RNA–Protein interactions for RNA: ENST00000475268.5

SEC61A2-213, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 1 (best)

Gene SEC61A2, Length 2,183 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-213ENST00000475268 GINS3Q9BRX5 216 aa15.09■□□□□ 0.01
SEC61A2-213ENST00000475268 LINC00574Q9H8X3 128 aa15.09■□□□□ 0.01
SEC61A2-213ENST00000475268 PLA2G2EQ9NZK7 142 aa15.09■□□□□ 0.01
SEC61A2-213ENST00000475268 WSB1Q9Y6I7 421 aa15.09■□□□□ 0.01
SEC61A2-213ENST00000475268 PKD1L2Q7Z442 2459 aa15.09■□□□□ 0.01
SEC61A2-213ENST00000475268 ITGB1BP1O14713 200 aa15.09■□□□□ 0.01
SEC61A2-213ENST00000475268 TNFRSF13BO14836 293 aaPredicted RBP15.09■□□□□ 0.01
SEC61A2-213ENST00000475268 LOXP28300 417 aaPredicted RBP15.09■□□□□ 0.01
SEC61A2-213ENST00000475268 SULT1A2P50226 295 aa15.09■□□□□ 0.01
SEC61A2-213ENST00000475268 ERVFRD-1P60508 538 aa15.09■□□□□ 0.01
SEC61A2-213ENST00000475268 BAXQ07812 192 aa15.09■□□□□ 0.01
SEC61A2-213ENST00000475268 C1orf229Q6ZS94 237 aaPredicted RBP15.09■□□□□ 0.01
SEC61A2-213ENST00000475268 H2BFWTQ7Z2G1 175 aa15.09■□□□□ 0.01
SEC61A2-213ENST00000475268 EIF4E3Q8N5X7 224 aaKnown RBP15.09■□□□□ 0.01
SEC61A2-213ENST00000475268 H1FXQ92522 213 aaKnown RBP15.09■□□□□ 0.01
SEC61A2-213ENST00000475268 LAMP3Q9UQV4 416 aa15.09■□□□□ 0.01
SEC61A2-213ENST00000475268 MEF2CQ06413 473 aaPredicted RBP15.08■□□□□ 0.01
SEC61A2-213ENST00000475268 LRRC10Q5BKY1 277 aa15.08■□□□□ 0.01
SEC61A2-213ENST00000475268 STX12Q86Y82 276 aa15.08■□□□□ 0.01
SEC61A2-213ENST00000475268 LINC00052Q96N35 136 aa15.08■□□□□ 0.01
SEC61A2-213ENST00000475268 SH3BGRL3Q9H299 93 aa15.08■□□□□ 0.01
SEC61A2-213ENST00000475268 PSENENQ9NZ42 101 aa15.08■□□□□ 0.01
SEC61A2-213ENST00000475268 SAA2-SAA4A0A096LPE2 208 aa15.08■□□□□ 0
SEC61A2-213ENST00000475268 MARCH11A6NNE9 402 aa15.08■□□□□ 0
SEC61A2-213ENST00000475268 LYNX1G3V0Z9 82 aa15.08■□□□□ 0
SEC61A2-213ENST00000475268 TXNL1O43396 289 aa15.08■□□□□ 0
SEC61A2-213ENST00000475268 SAA2P0DJI9 122 aaPredicted RBP15.08■□□□□ 0
SEC61A2-213ENST00000475268 LYNX1P0DP58 116 aa15.08■□□□□ 0
SEC61A2-213ENST00000475268 UBE2KP61086 200 aa15.08■□□□□ 0
SEC61A2-213ENST00000475268 TMEM267Q0VDI3 215 aaPredicted RBP15.08■□□□□ 0
SEC61A2-213ENST00000475268 ZNF266Q14584 549 aa15.08■□□□□ 0
SEC61A2-213ENST00000475268 LYG1Q8N1E2 194 aa15.08■□□□□ 0
SEC61A2-213ENST00000475268 MARC2Q969Z3 335 aa15.08■□□□□ 0
SEC61A2-213ENST00000475268 TMEM204Q9BSN7 226 aa15.08■□□□□ 0
SEC61A2-213ENST00000475268 GAL3ST2Q9H3Q3 398 aa15.08■□□□□ 0
SEC61A2-213ENST00000475268 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.08■□□□□ 0
SEC61A2-213ENST00000475268 CTSZQ9UBR2 303 aa15.08■□□□□ 0
SEC61A2-213ENST00000475268 RPUSD1Q9UJJ7 312 aaKnown RBP15.08■□□□□ 0
SEC61A2-213ENST00000475268 TMEM8BA6NDV4 472 aa15.07■□□□□ 0
SEC61A2-213ENST00000475268 FAM90A26D6RGX4 464 aa15.07■□□□□ 0
SEC61A2-213ENST00000475268 DVL1O14640 695 aa15.07■□□□□ 0
SEC61A2-213ENST00000475268 SPP1P10451 314 aa15.07■□□□□ 0
SEC61A2-213ENST00000475268 UQCRFS1P47985 274 aa15.07■□□□□ 0
SEC61A2-213ENST00000475268 TNFRSF9Q07011 255 aa15.07■□□□□ 0
SEC61A2-213ENST00000475268 MIDNQ504T8 468 aa15.07■□□□□ 0
SEC61A2-213ENST00000475268 TMEM200BQ69YZ2 307 aa15.07■□□□□ 0
SEC61A2-213ENST00000475268 ZNF439Q8NDP4 499 aa15.07■□□□□ 0
SEC61A2-213ENST00000475268 R3HDM4Q96D70 268 aa15.07■□□□□ 0
SEC61A2-213ENST00000475268 SAT2Q96F10 170 aaPredicted RBP15.07■□□□□ 0
SEC61A2-213ENST00000475268 SMIM8Q96KF7 97 aa15.07■□□□□ 0
SEC61A2-213ENST00000475268 PRELID3BQ9Y3B1 194 aa15.07■□□□□ 0
SEC61A2-213ENST00000475268 RAB29O14966 203 aa15.07■□□□□ 0
SEC61A2-213ENST00000475268 RBMXL2O75526 392 aaKnown RBP15.07■□□□□ 0
SEC61A2-213ENST00000475268 SEC11BP0C7V7 166 aa15.07■□□□□ 0
SEC61A2-213ENST00000475268 CCL3L1P16619 93 aa15.07■□□□□ 0
SEC61A2-213ENST00000475268 SULT1A1P50225 295 aa15.07■□□□□ 0
SEC61A2-213ENST00000475268 PXDC1Q5TGL8 231 aa15.07■□□□□ 0
SEC61A2-213ENST00000475268 CCDC28AQ8IWP9 274 aa15.07■□□□□ 0
SEC61A2-213ENST00000475268 ZNF714Q96N38 554 aa15.07■□□□□ 0
SEC61A2-213ENST00000475268 S1PR3Q99500 378 aa15.07■□□□□ 0
SEC61A2-213ENST00000475268 HRH4Q9H3N8 390 aa15.07■□□□□ 0
SEC61A2-213ENST00000475268 RBKSQ9H477 322 aa15.07■□□□□ 0
SEC61A2-213ENST00000475268 GAB2Q9UQC2 676 aa15.07■□□□□ 0
SEC61A2-213ENST00000475268 HPRT1P00492 218 aa15.06■□□□□ 0
SEC61A2-213ENST00000475268 ZP3P21754 424 aa15.06■□□□□ 0
SEC61A2-213ENST00000475268 COL8A2P25067 703 aa15.06■□□□□ 0
SEC61A2-213ENST00000475268 MRPS11P82912 194 aaKnown RBP15.06■□□□□ 0
SEC61A2-213ENST00000475268 TMEM30BQ3MIR4 351 aa15.06■□□□□ 0
SEC61A2-213ENST00000475268 HSPB7Q9UBY9 170 aa15.06■□□□□ 0
SEC61A2-213ENST00000475268 YLPM1P49750 1951 aaKnown RBP15.05■□□□□ 0
SEC61A2-213ENST00000475268 ZG16O60844 167 aa15.05■□□□□ 0
SEC61A2-213ENST00000475268 GNLYP22749 145 aa15.05■□□□□ 0
SEC61A2-213ENST00000475268 SSX9Q7RTT3 188 aa15.05■□□□□ 0
SEC61A2-213ENST00000475268 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.05■□□□□ 0
SEC61A2-213ENST00000475268 KRBOX1C9JBD0 128 aa15.05■□□□□ -0
SEC61A2-213ENST00000475268 METTL15P1P0C7V9 234 aa15.05■□□□□ -0
SEC61A2-213ENST00000475268 SPANXN5Q5MJ07 72 aa15.05■□□□□ -0
SEC61A2-213ENST00000475268 ZNF251Q9BRH9 671 aa15.05■□□□□ -0
SEC61A2-213ENST00000475268 KAAG1Q9UBP8 84 aa15.05■□□□□ -0
SEC61A2-213ENST00000475268 NDUFA2O43678 99 aa15.04■□□□□ -0
SEC61A2-213ENST00000475268 TAS2R30P59541 319 aa15.04■□□□□ -0
SEC61A2-213ENST00000475268 BLOC1S1P78537 153 aa15.04■□□□□ -0
SEC61A2-213ENST00000475268 VKORC1L1Q8N0U8 176 aa15.04■□□□□ -0
SEC61A2-213ENST00000475268 ATP5SQ99766 215 aa15.04■□□□□ -0
SEC61A2-213ENST00000475268 ZNRD1Q9P1U0 126 aa15.04■□□□□ -0
SEC61A2-213ENST00000475268 RBFOX2O43251 390 aaKnown RBP eCLIP15.04■□□□□ -0
SEC61A2-213ENST00000475268 PPOXP50336 477 aa15.04■□□□□ -0
SEC61A2-213ENST00000475268 HEPN1Q6WQI6 88 aa15.04■□□□□ -0
SEC61A2-213ENST00000475268 Q6ZRG5 221 aa15.04■□□□□ -0
SEC61A2-213ENST00000475268 SLC25A48Q6ZT89 311 aaKnown RBP15.04■□□□□ -0
SEC61A2-213ENST00000475268 DDB2Q92466 427 aa15.04■□□□□ -0
SEC61A2-213ENST00000475268 MMP26Q9NRE1 261 aa15.04■□□□□ -0
SEC61A2-213ENST00000475268 ABCA4P78363 2273 aa15.03■□□□□ -0
SEC61A2-213ENST00000475268 RAB19A4D1S5 217 aa15.03■□□□□ -0
SEC61A2-213ENST00000475268 SHOXO15266 292 aa15.03■□□□□ -0
SEC61A2-213ENST00000475268 DANCRP0C864 163 aa15.03■□□□□ -0
SEC61A2-213ENST00000475268 DAOP14920 347 aa15.03■□□□□ -0
SEC61A2-213ENST00000475268 ATP6V0CP27449 155 aa15.03■□□□□ -0
SEC61A2-213ENST00000475268 KIR2DS2P43631 304 aa15.03■□□□□ -0
SEC61A2-213ENST00000475268 TUSC1Q2TAM9 212 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms