RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 THBS3P49746 956 aa13.44□□□□□ -0.26
SCAF11-206ENST00000474828 F2RL1P55085 397 aa13.44□□□□□ -0.26
SCAF11-206ENST00000474828 HES1Q14469 280 aa13.44□□□□□ -0.26
SCAF11-206ENST00000474828 FAM131AQ6UXB0 335 aa13.44□□□□□ -0.26
SCAF11-206ENST00000474828 CCDC190Q86UF4 302 aa13.44□□□□□ -0.26
SCAF11-206ENST00000474828 PDPNQ86YL7 162 aa13.44□□□□□ -0.26
SCAF11-206ENST00000474828 OR2T6Q8NHC8 308 aa13.44□□□□□ -0.26
SCAF11-206ENST00000474828 FCAMRQ8WWV6 532 aa13.44□□□□□ -0.26
SCAF11-206ENST00000474828 ADTRPQ96IZ2 230 aa13.44□□□□□ -0.26
SCAF11-206ENST00000474828 RITA1Q96K30 269 aa13.44□□□□□ -0.26
SCAF11-206ENST00000474828 ZNF580Q9UK33 172 aa13.44□□□□□ -0.26
SCAF11-206ENST00000474828 WASHC3Q9Y3C0 194 aa13.44□□□□□ -0.26
SCAF11-206ENST00000474828 M0R1X1 148 aa13.43□□□□□ -0.26
SCAF11-206ENST00000474828 IGHG2P01859 326 aa13.43□□□□□ -0.26
SCAF11-206ENST00000474828 HRH1P35367 487 aa13.43□□□□□ -0.26
SCAF11-206ENST00000474828 LINC00205P59089 165 aa13.43□□□□□ -0.26
SCAF11-206ENST00000474828 KRTAP10-3P60369 221 aa13.43□□□□□ -0.26
SCAF11-206ENST00000474828 HNF4GQ14541 408 aa13.43□□□□□ -0.26
SCAF11-206ENST00000474828 ACTBL2Q562R1 376 aa13.43□□□□□ -0.26
SCAF11-206ENST00000474828 TMEM229BQ8NBD8 167 aa13.43□□□□□ -0.26
SCAF11-206ENST00000474828 ZBTB34Q8NCN2 500 aa13.43□□□□□ -0.26
SCAF11-206ENST00000474828 OR5H2Q8NGV7 314 aa13.43□□□□□ -0.26
SCAF11-206ENST00000474828 MOB3AQ96BX8 217 aa13.43□□□□□ -0.26
SCAF11-206ENST00000474828 CITED1Q99966 193 aa13.43□□□□□ -0.26
SCAF11-206ENST00000474828 V9GYH0 126 aa13.43□□□□□ -0.26
SCAF11-206ENST00000474828 DGCR2P98153 550 aa13.42□□□□□ -0.26
SCAF11-206ENST00000474828 ABCA11PQ4W5N1 156 aa13.42□□□□□ -0.26
SCAF11-206ENST00000474828 TMEM177Q53S58 311 aa13.42□□□□□ -0.26
SCAF11-206ENST00000474828 GLDNQ6ZMI3 551 aaPredicted RBP13.42□□□□□ -0.26
SCAF11-206ENST00000474828 DRAXINQ8NBI3 349 aaPredicted RBP13.42□□□□□ -0.26
SCAF11-206ENST00000474828 RBMXL1Q96E39 390 aaKnown RBP13.42□□□□□ -0.26
SCAF11-206ENST00000474828 EHFQ9NZC4 300 aa13.42□□□□□ -0.26
SCAF11-206ENST00000474828 SIGLEC9Q9Y336 463 aa13.42□□□□□ -0.26
SCAF11-206ENST00000474828 FABP12A6NFH5 140 aa13.41□□□□□ -0.26
SCAF11-206ENST00000474828 LINC00473A8K010 186 aa13.41□□□□□ -0.26
SCAF11-206ENST00000474828 SPDEFO95238 335 aa13.41□□□□□ -0.26
SCAF11-206ENST00000474828 PMP2P02689 132 aa13.41□□□□□ -0.26
SCAF11-206ENST00000474828 IGKV1-16P04430 117 aa13.41□□□□□ -0.26
SCAF11-206ENST00000474828 FCER2P06734 321 aa13.41□□□□□ -0.26
SCAF11-206ENST00000474828 RRASP10301 218 aa13.41□□□□□ -0.26
SCAF11-206ENST00000474828 HLA-DMAP28067 261 aa13.41□□□□□ -0.26
SCAF11-206ENST00000474828 SHISA2Q6UWI4 295 aa13.41□□□□□ -0.26
SCAF11-206ENST00000474828 ZNF66Q6ZN08 573 aa13.41□□□□□ -0.26
SCAF11-206ENST00000474828 LHFPL1Q86WI0 220 aa13.41□□□□□ -0.26
SCAF11-206ENST00000474828 ARRDC1Q8N5I2 433 aa13.41□□□□□ -0.26
SCAF11-206ENST00000474828 C3orf56Q8N813 242 aa13.41□□□□□ -0.26
SCAF11-206ENST00000474828 OR6Q1Q8NGQ2 317 aa13.41□□□□□ -0.26
SCAF11-206ENST00000474828 HSD17B10Q99714 261 aaKnown RBP13.41□□□□□ -0.26
SCAF11-206ENST00000474828 RBM7Q9Y580 266 aaKnown RBP13.41□□□□□ -0.26
SCAF11-206ENST00000474828 NBR2O15453 112 aa13.4□□□□□ -0.26
SCAF11-206ENST00000474828 HLA-DRB1P01911 266 aa13.4□□□□□ -0.26
SCAF11-206ENST00000474828 APOA2P02652 100 aa13.4□□□□□ -0.26
SCAF11-206ENST00000474828 GNRHRP30968 328 aa13.4□□□□□ -0.26
SCAF11-206ENST00000474828 UCP3P55916 312 aa13.4□□□□□ -0.26
SCAF11-206ENST00000474828 BRWD1-AS2P59051 145 aa13.4□□□□□ -0.26
SCAF11-206ENST00000474828 RPL30P62888 115 aaKnown RBP13.4□□□□□ -0.26
SCAF11-206ENST00000474828 IL18Q14116 193 aa13.4□□□□□ -0.26
SCAF11-206ENST00000474828 ZNF79Q15937 498 aa13.4□□□□□ -0.26
SCAF11-206ENST00000474828 C5orf64Q2M2E5 130 aa13.4□□□□□ -0.26
SCAF11-206ENST00000474828 AADACL3Q5VUY0 350 aa13.4□□□□□ -0.26
SCAF11-206ENST00000474828 LINC00299Q6ZSB3 139 aa13.4□□□□□ -0.26
SCAF11-206ENST00000474828 BVESQ8NE79 360 aa13.4□□□□□ -0.26
SCAF11-206ENST00000474828 OR6F1Q8NGZ6 308 aa13.4□□□□□ -0.26
SCAF11-206ENST00000474828 BORCS5Q969J3 196 aa13.4□□□□□ -0.26
SCAF11-206ENST00000474828 IGLV2-23P01705 113 aa13.39□□□□□ -0.27
SCAF11-206ENST00000474828 CD3DP04234 171 aa13.39□□□□□ -0.27
SCAF11-206ENST00000474828 CRYGBP07316 175 aa13.39□□□□□ -0.27
SCAF11-206ENST00000474828 CNTFRP26992 372 aa13.39□□□□□ -0.27
SCAF11-206ENST00000474828 S100A5P33763 92 aa13.39□□□□□ -0.27
SCAF11-206ENST00000474828 LGALS7P47929 136 aa13.39□□□□□ -0.27
SCAF11-206ENST00000474828 TAS2R19P59542 299 aa13.39□□□□□ -0.27
SCAF11-206ENST00000474828 MMDQ15546 238 aa13.39□□□□□ -0.27
SCAF11-206ENST00000474828 FLYWCH2Q96CP2 140 aaKnown RBP13.39□□□□□ -0.27
SCAF11-206ENST00000474828 ZNF2Q9BSG1 426 aaPredicted RBP13.39□□□□□ -0.27
SCAF11-206ENST00000474828 FXYD6Q9H0Q3 95 aa13.39□□□□□ -0.27
SCAF11-206ENST00000474828 CCL28Q9NRJ3 127 aa13.39□□□□□ -0.27
SCAF11-206ENST00000474828 SLC35D1Q9NTN3 355 aa13.39□□□□□ -0.27
SCAF11-206ENST00000474828 TAS2R8Q9NYW2 309 aa13.39□□□□□ -0.27
SCAF11-206ENST00000474828 ANKRD20A5PA0PJZ0 165 aa13.38□□□□□ -0.27
SCAF11-206ENST00000474828 NCBP2LA6PVI3 153 aaKnown RBP13.38□□□□□ -0.27
SCAF11-206ENST00000474828 RRHO14718 337 aa13.38□□□□□ -0.27
SCAF11-206ENST00000474828 RBFOX2O43251 390 aaKnown RBP eCLIP13.38□□□□□ -0.27
SCAF11-206ENST00000474828 IGF1P05019 195 aa13.38□□□□□ -0.27
SCAF11-206ENST00000474828 ZNF735P0CB33 412 aa13.38□□□□□ -0.27
SCAF11-206ENST00000474828 VDAC2P45880 294 aaPredicted RBP13.38□□□□□ -0.27
SCAF11-206ENST00000474828 PSG5Q15238 335 aa13.38□□□□□ -0.27
SCAF11-206ENST00000474828 ZNF818PQ6ZRF7 136 aa13.38□□□□□ -0.27
SCAF11-206ENST00000474828 MFSD4AQ8N468 514 aa13.38□□□□□ -0.27
SCAF11-206ENST00000474828 OSR1Q8TAX0 266 aaPredicted RBP13.38□□□□□ -0.27
SCAF11-206ENST00000474828 SECTM1Q8WVN6 248 aa13.38□□□□□ -0.27
SCAF11-206ENST00000474828 TRIM63Q969Q1 353 aa13.38□□□□□ -0.27
SCAF11-206ENST00000474828 TSNAXQ99598 290 aaKnown RBP13.38□□□□□ -0.27
SCAF11-206ENST00000474828 TINAGL1Q9GZM7 467 aaPredicted RBP13.38□□□□□ -0.27
SCAF11-206ENST00000474828 SLC5A7Q9GZV3 580 aa13.38□□□□□ -0.27
SCAF11-206ENST00000474828 SH2D7A6NKC9 451 aaPredicted RBP13.37□□□□□ -0.27
SCAF11-206ENST00000474828 H7C2Y5 167 aa13.37□□□□□ -0.27
SCAF11-206ENST00000474828 KCNAB3O43448 404 aa13.37□□□□□ -0.27
SCAF11-206ENST00000474828 CSF1P09603 554 aa13.37□□□□□ -0.27
SCAF11-206ENST00000474828 CRIP2P52943 208 aaPredicted RBP13.37□□□□□ -0.27
SCAF11-206ENST00000474828 HERV-K104P61576 105 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms