RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 CFDP00746 253 aaPredicted RBP16.24■□□□□ 0.19
SSR1-204ENST00000474597 PPIAL4GP0DN37 164 aa16.24■□□□□ 0.19
SSR1-204ENST00000474597 HKR1P10072 659 aa16.24■□□□□ 0.19
SSR1-204ENST00000474597 THBS3P49746 956 aa16.24■□□□□ 0.19
SSR1-204ENST00000474597 DLX6P56179 175 aa16.24■□□□□ 0.19
SSR1-204ENST00000474597 BRWD1-AS2P59051 145 aa16.24■□□□□ 0.19
SSR1-204ENST00000474597 ODF3L1Q8IXM7 274 aa16.24■□□□□ 0.19
SSR1-204ENST00000474597 MAGT1Q9H0U3 335 aa16.24■□□□□ 0.19
SSR1-204ENST00000474597 SSSCA1O60232 199 aa16.23■□□□□ 0.19
SSR1-204ENST00000474597 PITX3O75364 302 aa16.23■□□□□ 0.19
SSR1-204ENST00000474597 HPRT1P00492 218 aa16.23■□□□□ 0.19
SSR1-204ENST00000474597 IGHV1-8P0DP01 117 aa16.23■□□□□ 0.19
SSR1-204ENST00000474597 P2RY1P47900 373 aa16.23■□□□□ 0.19
SSR1-204ENST00000474597 ID3Q02535 119 aa16.23■□□□□ 0.19
SSR1-204ENST00000474597 OR8H3Q8N146 312 aa16.23■□□□□ 0.19
SSR1-204ENST00000474597 OVOL3O00110 214 aa16.22■□□□□ 0.19
SSR1-204ENST00000474597 HTR2BP41595 481 aa16.22■□□□□ 0.19
SSR1-204ENST00000474597 Q6ZRM9 215 aa16.22■□□□□ 0.19
SSR1-204ENST00000474597 H2BFWTQ7Z2G1 175 aa16.22■□□□□ 0.19
SSR1-204ENST00000474597 OR10X1Q8NGY0 326 aa16.22■□□□□ 0.19
SSR1-204ENST00000474597 CCL19Q99731 98 aa16.22■□□□□ 0.19
SSR1-204ENST00000474597 ZNF251Q9BRH9 671 aa16.22■□□□□ 0.19
SSR1-204ENST00000474597 SESN1Q9Y6P5 492 aa16.22■□□□□ 0.19
SSR1-204ENST00000474597 hCG_1809904A0A1W2PP81 198 aa16.22■□□□□ 0.19
SSR1-204ENST00000474597 A0A1W2PPE2 198 aa16.22■□□□□ 0.19
SSR1-204ENST00000474597 A0A1W2PR64 198 aa16.22■□□□□ 0.19
SSR1-204ENST00000474597 A0A1W2PRV1 198 aa16.22■□□□□ 0.19
SSR1-204ENST00000474597 RBFOX2O43251 390 aaKnown RBP eCLIP16.22■□□□□ 0.19
SSR1-204ENST00000474597 DMBX1Q8NFW5 382 aa16.22■□□□□ 0.19
SSR1-204ENST00000474597 OR4S2Q8NH73 311 aa16.22■□□□□ 0.19
SSR1-204ENST00000474597 C8orf46Q8TAG6 207 aa16.22■□□□□ 0.19
SSR1-204ENST00000474597 ST8SIA2Q92186 375 aa16.22■□□□□ 0.19
SSR1-204ENST00000474597 R3HDM4Q96D70 268 aa16.22■□□□□ 0.19
SSR1-204ENST00000474597 SSBP3Q9BWW4 388 aaPredicted RBP16.22■□□□□ 0.19
SSR1-204ENST00000474597 J3QR06 171 aa16.21■□□□□ 0.19
SSR1-204ENST00000474597 GPR137BO60478 399 aa16.21■□□□□ 0.19
SSR1-204ENST00000474597 ERVK-16P61578 105 aa16.21■□□□□ 0.19
SSR1-204ENST00000474597 GPR157Q5UAW9 335 aa16.21■□□□□ 0.19
SSR1-204ENST00000474597 C1orf229Q6ZS94 237 aaPredicted RBP16.21■□□□□ 0.19
SSR1-204ENST00000474597 C8orf31Q8N9H6 132 aa16.21■□□□□ 0.19
SSR1-204ENST00000474597 TMEM133Q9H2Q1 129 aa16.21■□□□□ 0.19
SSR1-204ENST00000474597 COA4Q9NYJ1 87 aa16.21■□□□□ 0.19
SSR1-204ENST00000474597 ZNRD1Q9P1U0 126 aa16.21■□□□□ 0.19
SSR1-204ENST00000474597 ZFYVE26Q68DK2 2539 aa16.2■□□□□ 0.18
SSR1-204ENST00000474597 MALRD1Q5VYJ5 2156 aa16.2■□□□□ 0.18
SSR1-204ENST00000474597 A0A087X0M5 115 aa16.2■□□□□ 0.18
SSR1-204ENST00000474597 A0A1B0GX30 115 aa16.2■□□□□ 0.18
SSR1-204ENST00000474597 MARCH11A6NNE9 402 aa16.2■□□□□ 0.18
SSR1-204ENST00000474597 LIPFP07098 398 aa16.2■□□□□ 0.18
SSR1-204ENST00000474597 MMP9P14780 707 aa16.2■□□□□ 0.18
SSR1-204ENST00000474597 ABHD12Q8N2K0 398 aa16.2■□□□□ 0.18
SSR1-204ENST00000474597 LINC00311Q8N616 119 aa16.2■□□□□ 0.18
SSR1-204ENST00000474597 OR9G1Q8NH87 305 aa16.2■□□□□ 0.18
SSR1-204ENST00000474597 DDB2Q92466 427 aa16.2■□□□□ 0.18
SSR1-204ENST00000474597 TOR1AO14656 332 aa16.19■□□□□ 0.18
SSR1-204ENST00000474597 TAAR5O14804 337 aa16.19■□□□□ 0.18
SSR1-204ENST00000474597 CHST1O43916 411 aa16.19■□□□□ 0.18
SSR1-204ENST00000474597 COX6B1P14854 86 aa16.19■□□□□ 0.18
SSR1-204ENST00000474597 CAV2P51636 162 aa16.19■□□□□ 0.18
SSR1-204ENST00000474597 RAB14P61106 215 aa16.19■□□□□ 0.18
SSR1-204ENST00000474597 ALKAL2Q6UX46 152 aa16.19■□□□□ 0.18
SSR1-204ENST00000474597 ONECUT1Q9UBC0 465 aa16.19■□□□□ 0.18
SSR1-204ENST00000474597 ATP6V1G1O75348 118 aa16.19■□□□□ 0.18
SSR1-204ENST00000474597 RBMXL2O75526 392 aaKnown RBP16.19■□□□□ 0.18
SSR1-204ENST00000474597 RBP4P02753 201 aa16.19■□□□□ 0.18
SSR1-204ENST00000474597 ZNF833PQ6ZTB9 187 aa16.19■□□□□ 0.18
SSR1-204ENST00000474597 C11orf42Q8N5U0 333 aa16.19■□□□□ 0.18
SSR1-204ENST00000474597 OR2C3Q8N628 320 aa16.19■□□□□ 0.18
SSR1-204ENST00000474597 ZNF525Q8N782 197 aa16.19■□□□□ 0.18
SSR1-204ENST00000474597 SLC25A31Q9H0C2 315 aa16.19■□□□□ 0.18
SSR1-204ENST00000474597 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.19■□□□□ 0.18
SSR1-204ENST00000474597 ITGB1BP2Q9UKP3 347 aa16.19■□□□□ 0.18
SSR1-204ENST00000474597 DOPEY1Q5JWR5 2465 aa16.18■□□□□ 0.18
SSR1-204ENST00000474597 LOC105371242A0A075B767 164 aa16.18■□□□□ 0.18
SSR1-204ENST00000474597 FAM90A26D6RGX4 464 aa16.18■□□□□ 0.18
SSR1-204ENST00000474597 P0C879 139 aa16.18■□□□□ 0.18
SSR1-204ENST00000474597 TPT1P13693 172 aaKnown RBP16.18■□□□□ 0.18
SSR1-204ENST00000474597 NQO2P16083 231 aa16.18■□□□□ 0.18
SSR1-204ENST00000474597 IL3RAP26951 378 aa16.18■□□□□ 0.18
SSR1-204ENST00000474597 SRSF1Q07955 248 aaKnown RBP eCLIP16.18■□□□□ 0.181e-6■■■■□ 20
SSR1-204ENST00000474597 RTL8BQ17RB0 113 aa16.18■□□□□ 0.18
SSR1-204ENST00000474597 ZNF383Q8NA42 475 aa16.18■□□□□ 0.18
SSR1-204ENST00000474597 ZNF596Q8TC21 504 aa16.18■□□□□ 0.18
SSR1-204ENST00000474597 SCARB1Q8WTV0 552 aa16.18■□□□□ 0.18
SSR1-204ENST00000474597 TMEM186Q96B77 213 aa16.18■□□□□ 0.18
SSR1-204ENST00000474597 RAB40CQ96S21 281 aa16.18■□□□□ 0.18
SSR1-204ENST00000474597 SYNGR2O43760 224 aa16.17■□□□□ 0.18
SSR1-204ENST00000474597 CRYZL1O95825 349 aa16.17■□□□□ 0.18
SSR1-204ENST00000474597 RPL23AP62750 156 aaKnown RBP16.17■□□□□ 0.18
SSR1-204ENST00000474597 FAM71F2Q6NXP2 309 aa16.17■□□□□ 0.18
SSR1-204ENST00000474597 LY6G5BQ8NDX9 201 aa16.17■□□□□ 0.18
SSR1-204ENST00000474597 C11orf1Q9H5F2 150 aa16.17■□□□□ 0.18
SSR1-204ENST00000474597 SLC35D1Q9NTN3 355 aa16.17■□□□□ 0.18
SSR1-204ENST00000474597 EPG5Q9HCE0 2579 aa16.17■□□□□ 0.18
SSR1-204ENST00000474597 A1L4Q6 167 aa16.17■□□□□ 0.18
SSR1-204ENST00000474597 FAM24AA6NFZ4 105 aa16.17■□□□□ 0.18
SSR1-204ENST00000474597 C22orf46C9J442 243 aa16.17■□□□□ 0.18
SSR1-204ENST00000474597 MED6O75586 246 aa16.17■□□□□ 0.18
SSR1-204ENST00000474597 CT45A6P0DMU7 189 aa16.17■□□□□ 0.18
SSR1-204ENST00000474597 CT45A5P0DMU8 189 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms