RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 AADACP22760 399 aa10.9□□□□□ -0.66
USF1-205ENST00000473969 RCVRNP35243 200 aa10.9□□□□□ -0.66
USF1-205ENST00000473969 C5orf64Q2M2E5 130 aa10.9□□□□□ -0.66
USF1-205ENST00000473969 C2orf68Q2NKX9 166 aa10.9□□□□□ -0.66
USF1-205ENST00000473969 LIN54Q6MZP7 749 aa10.9□□□□□ -0.66
USF1-205ENST00000473969 FAM71E2Q8N5Q1 922 aa10.9□□□□□ -0.66
USF1-205ENST00000473969 ZNF383Q8NA42 475 aa10.9□□□□□ -0.66
USF1-205ENST00000473969 NPBQ8NG41 125 aa10.9□□□□□ -0.66
USF1-205ENST00000473969 SECTM1Q8WVN6 248 aa10.9□□□□□ -0.66
USF1-205ENST00000473969 GIMAP1Q8WWP7 306 aa10.9□□□□□ -0.66
USF1-205ENST00000473969 SNAPC3Q92966 411 aa10.9□□□□□ -0.66
USF1-205ENST00000473969 BORCS5Q969J3 196 aa10.9□□□□□ -0.66
USF1-205ENST00000473969 DIRAS2Q96HU8 199 aa10.9□□□□□ -0.66
USF1-205ENST00000473969 RABL2AQ9UBK7 228 aaPredicted RBP10.9□□□□□ -0.66
USF1-205ENST00000473969 RABL2BQ9UNT1 228 aa10.9□□□□□ -0.66
USF1-205ENST00000473969 RRHO14718 337 aa10.89□□□□□ -0.67
USF1-205ENST00000473969 PPYP01298 95 aa10.89□□□□□ -0.67
USF1-205ENST00000473969 OPN1MWP04001 364 aa10.89□□□□□ -0.67
USF1-205ENST00000473969 OPN1MW2P0DN77 364 aa10.89□□□□□ -0.67
USF1-205ENST00000473969 OPN1MW3P0DN78 364 aa10.89□□□□□ -0.67
USF1-205ENST00000473969 NAT1P18440 290 aa10.89□□□□□ -0.67
USF1-205ENST00000473969 CNTFRP26992 372 aa10.89□□□□□ -0.67
USF1-205ENST00000473969 HLA-DMAP28067 261 aa10.89□□□□□ -0.67
USF1-205ENST00000473969 LGALS7P47929 136 aa10.89□□□□□ -0.67
USF1-205ENST00000473969 FXYD4P59646 89 aa10.89□□□□□ -0.67
USF1-205ENST00000473969 TSPAN5P62079 268 aa10.89□□□□□ -0.67
USF1-205ENST00000473969 RNASE12Q5GAN4 147 aaKnown RBP10.89□□□□□ -0.67
USF1-205ENST00000473969 LAX1Q8IWV1 398 aa10.89□□□□□ -0.67
USF1-205ENST00000473969 BVESQ8NE79 360 aa10.89□□□□□ -0.67
USF1-205ENST00000473969 OR6F1Q8NGZ6 308 aa10.89□□□□□ -0.67
USF1-205ENST00000473969 MCFD2Q8NI22 146 aa10.89□□□□□ -0.67
USF1-205ENST00000473969 FCAMRQ8WWV6 532 aa10.89□□□□□ -0.67
USF1-205ENST00000473969 RBMXL1Q96E39 390 aaKnown RBP10.89□□□□□ -0.67
USF1-205ENST00000473969 RITA1Q96K30 269 aa10.89□□□□□ -0.67
USF1-205ENST00000473969 DCUN1D5Q9BTE7 237 aa10.89□□□□□ -0.67
USF1-205ENST00000473969 SLC5A7Q9GZV3 580 aa10.89□□□□□ -0.67
USF1-205ENST00000473969 ANAPC10Q9UM13 185 aa10.89□□□□□ -0.67
USF1-205ENST00000473969 RBMX2Q9Y388 322 aaKnown RBP10.89□□□□□ -0.67
USF1-205ENST00000473969 TENM1Q9UKZ4 2725 aa10.88□□□□□ -0.67
USF1-205ENST00000473969 IGKV1D-13A0A0B4J2D9 117 aa10.88□□□□□ -0.67
USF1-205ENST00000473969 TCRBV4S1A1TA0A5B7 111 aa10.88□□□□□ -0.67
USF1-205ENST00000473969 SHOXO15266 292 aa10.88□□□□□ -0.67
USF1-205ENST00000473969 NDUFA3O95167 84 aa10.88□□□□□ -0.67
USF1-205ENST00000473969 SPDEFO95238 335 aa10.88□□□□□ -0.67
USF1-205ENST00000473969 IFNA6P05013 189 aa10.88□□□□□ -0.67
USF1-205ENST00000473969 CSF1P09603 554 aa10.88□□□□□ -0.67
USF1-205ENST00000473969 IGKV1-13P0DP09 117 aa10.88□□□□□ -0.67
USF1-205ENST00000473969 CD28P10747 220 aa10.88□□□□□ -0.67
USF1-205ENST00000473969 VDAC1P21796 283 aa10.88□□□□□ -0.67
USF1-205ENST00000473969 DUTP33316 252 aaKnown RBP10.88□□□□□ -0.67
USF1-205ENST00000473969 HRH1P35367 487 aa10.88□□□□□ -0.67
USF1-205ENST00000473969 RFX2P48378 723 aa10.88□□□□□ -0.67
USF1-205ENST00000473969 LINC00205P59089 165 aa10.88□□□□□ -0.67
USF1-205ENST00000473969 MRPS10P82664 201 aaKnown RBP10.88□□□□□ -0.67
USF1-205ENST00000473969 DYRK1AQ13627 763 aa10.88□□□□□ -0.67
USF1-205ENST00000473969 IL18Q14116 193 aa10.88□□□□□ -0.67
USF1-205ENST00000473969 NSUN5P1Q3KNT7 163 aa10.88□□□□□ -0.67
USF1-205ENST00000473969 ACTBL2Q562R1 376 aa10.88□□□□□ -0.67
USF1-205ENST00000473969 PYHIN1Q6K0P9 492 aa10.88□□□□□ -0.67
USF1-205ENST00000473969 KCTD9Q7L273 389 aa10.88□□□□□ -0.67
USF1-205ENST00000473969 OVCH2Q7RTZ1 564 aa10.88□□□□□ -0.67
USF1-205ENST00000473969 STPG2Q8N412 459 aa10.88□□□□□ -0.67
USF1-205ENST00000473969 ZBTB34Q8NCN2 500 aa10.88□□□□□ -0.67
USF1-205ENST00000473969 NOL4LQ96MY1 436 aaPredicted RBP10.88□□□□□ -0.67
USF1-205ENST00000473969 HSD17B10Q99714 261 aaKnown RBP10.88□□□□□ -0.67
USF1-205ENST00000473969 ZNF2Q9BSG1 426 aaPredicted RBP10.88□□□□□ -0.67
USF1-205ENST00000473969 MIXL1Q9H2W2 232 aa10.88□□□□□ -0.67
USF1-205ENST00000473969 FBXL15Q9H469 300 aa10.88□□□□□ -0.67
USF1-205ENST00000473969 METTL1Q9UBP6 276 aaKnown RBP10.88□□□□□ -0.67
USF1-205ENST00000473969 LINC00527Q9UJ94 153 aa10.88□□□□□ -0.67
USF1-205ENST00000473969 ZNF701M0R085 212 aaPredicted RBP10.87□□□□□ -0.67
USF1-205ENST00000473969 HLA-DRB1P01911 266 aa10.87□□□□□ -0.67
USF1-205ENST00000473969 IGKV1-16P04430 117 aa10.87□□□□□ -0.67
USF1-205ENST00000473969 S100GP29377 79 aa10.87□□□□□ -0.67
USF1-205ENST00000473969 S100A5P33763 92 aa10.87□□□□□ -0.67
USF1-205ENST00000473969 PSG5Q15238 335 aa10.87□□□□□ -0.67
USF1-205ENST00000473969 MSMO1Q15800 293 aa10.87□□□□□ -0.67
USF1-205ENST00000473969 VMA21Q3ZAQ7 101 aa10.87□□□□□ -0.67
USF1-205ENST00000473969 KHDC1LQ5JSQ8 128 aa10.87□□□□□ -0.67
USF1-205ENST00000473969 DHRS11Q6UWP2 260 aa10.87□□□□□ -0.67
USF1-205ENST00000473969 ZNF66Q6ZN08 573 aa10.87□□□□□ -0.67
USF1-205ENST00000473969 TMEM17Q86X19 198 aa10.87□□□□□ -0.67
USF1-205ENST00000473969 NDUFA11Q86Y39 141 aa10.87□□□□□ -0.67
USF1-205ENST00000473969 COMMD1Q8N668 190 aa10.87□□□□□ -0.67
USF1-205ENST00000473969 ABHD5Q8WTS1 349 aa10.87□□□□□ -0.67
USF1-205ENST00000473969 TCTEX1D2Q8WW35 142 aa10.87□□□□□ -0.67
USF1-205ENST00000473969 HARBI1Q96MB7 349 aa10.87□□□□□ -0.67
USF1-205ENST00000473969 CLCC1Q96S66 551 aa10.87□□□□□ -0.67
USF1-205ENST00000473969 SLIRPQ9GZT3 109 aaKnown RBP10.87□□□□□ -0.67
USF1-205ENST00000473969 CCL28Q9NRJ3 127 aa10.87□□□□□ -0.67
USF1-205ENST00000473969 NDUFA13Q9P0J0 144 aa10.87□□□□□ -0.67
USF1-205ENST00000473969 LINC00473A8K010 186 aa10.86□□□□□ -0.67
USF1-205ENST00000473969 SLC25A17O43808 307 aa10.86□□□□□ -0.67
USF1-205ENST00000473969 FCGR3BO75015 233 aa10.86□□□□□ -0.67
USF1-205ENST00000473969 CRYZL1O95825 349 aa10.86□□□□□ -0.67
USF1-205ENST00000473969 CATR1Q13166 79 aa10.86□□□□□ -0.67
USF1-205ENST00000473969 TMEM177Q53S58 311 aa10.86□□□□□ -0.67
USF1-205ENST00000473969 PRR31Q5SQ13 230 aa10.86□□□□□ -0.67
USF1-205ENST00000473969 LPCAT3Q6P1A2 487 aa10.86□□□□□ -0.67
USF1-205ENST00000473969 TEX38Q6PEX7 206 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms