RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 ST6GALNAC5Q9BVH7 336 aa10.16□□□□□ -0.78
SHROOM3-204ENST00000473602 ELF5Q9UKW6 265 aaPredicted RBP10.16□□□□□ -0.78
SHROOM3-204ENST00000473602 RBM7Q9Y580 266 aaKnown RBP10.16□□□□□ -0.78
SHROOM3-204ENST00000473602 IGKV1D-8A0A087WSZ0 117 aa10.15□□□□□ -0.78
SHROOM3-204ENST00000473602 NUDT19A8MXV4 375 aa10.15□□□□□ -0.78
SHROOM3-204ENST00000473602 ATP6V0E1O15342 81 aa10.15□□□□□ -0.78
SHROOM3-204ENST00000473602 DUS4LO95620 317 aaKnown RBP10.15□□□□□ -0.78
SHROOM3-204ENST00000473602 THBS3P49746 956 aa10.15□□□□□ -0.78
SHROOM3-204ENST00000473602 KRTAP10-11P60412 298 aa10.15□□□□□ -0.78
SHROOM3-204ENST00000473602 CBX3Q13185 183 aa10.15□□□□□ -0.78
SHROOM3-204ENST00000473602 PLGLAQ15195 96 aa10.15□□□□□ -0.78
SHROOM3-204ENST00000473602 DMRTA1Q5VZB9 504 aa10.15□□□□□ -0.78
SHROOM3-204ENST00000473602 ZNF660Q6AZW8 331 aaPredicted RBP10.15□□□□□ -0.78
SHROOM3-204ENST00000473602 ZNF695Q8IW36 515 aa10.15□□□□□ -0.78
SHROOM3-204ENST00000473602 DRAXINQ8NBI3 349 aaPredicted RBP10.15□□□□□ -0.78
SHROOM3-204ENST00000473602 FLYWCH2Q96CP2 140 aaKnown RBP10.15□□□□□ -0.78
SHROOM3-204ENST00000473602 ADTRPQ96IZ2 230 aa10.15□□□□□ -0.78
SHROOM3-204ENST00000473602 FBXL15Q9H469 300 aa10.15□□□□□ -0.78
SHROOM3-204ENST00000473602 SLC35D1Q9NTN3 355 aa10.15□□□□□ -0.78
SHROOM3-204ENST00000473602 SDHAF2Q9NX18 166 aa10.15□□□□□ -0.78
SHROOM3-204ENST00000473602 ANXA10Q9UJ72 324 aa10.15□□□□□ -0.78
SHROOM3-204ENST00000473602 TRAV18A0A075B6X5 111 aa10.14□□□□□ -0.79
SHROOM3-204ENST00000473602 SSX5O60225 188 aa10.14□□□□□ -0.79
SHROOM3-204ENST00000473602 SLC22A5O76082 557 aa10.14□□□□□ -0.79
SHROOM3-204ENST00000473602 IGKV1-16P04430 117 aa10.14□□□□□ -0.79
SHROOM3-204ENST00000473602 RRASP10301 218 aa10.14□□□□□ -0.79
SHROOM3-204ENST00000473602 PSMB8P28062 276 aa10.14□□□□□ -0.79
SHROOM3-204ENST00000473602 PPIFP30405 207 aaKnown RBP10.14□□□□□ -0.79
SHROOM3-204ENST00000473602 RPS19P39019 145 aaKnown RBP10.14□□□□□ -0.79
SHROOM3-204ENST00000473602 MYCNOSP40205 109 aa10.14□□□□□ -0.79
SHROOM3-204ENST00000473602 CDX1P47902 265 aaPredicted RBP10.14□□□□□ -0.79
SHROOM3-204ENST00000473602 CRIP2P52943 208 aaPredicted RBP10.14□□□□□ -0.79
SHROOM3-204ENST00000473602 RPS16P62249 146 aaKnown RBP10.14□□□□□ -0.79
SHROOM3-204ENST00000473602 CD69Q07108 199 aa10.14□□□□□ -0.79
SHROOM3-204ENST00000473602 RTL8BQ17RB0 113 aa10.14□□□□□ -0.79
SHROOM3-204ENST00000473602 UBE2NLQ5JXB2 153 aa10.14□□□□□ -0.79
SHROOM3-204ENST00000473602 TCTEX1D1Q8N7M0 179 aa10.14□□□□□ -0.79
SHROOM3-204ENST00000473602 KLHL30-AS1Q8NEE0 82 aa10.14□□□□□ -0.79
SHROOM3-204ENST00000473602 OR13F1Q8NGS4 319 aa10.14□□□□□ -0.79
SHROOM3-204ENST00000473602 KCTD12Q96CX2 325 aaKnown RBP10.14□□□□□ -0.79
SHROOM3-204ENST00000473602 RCC1LQ96I51 464 aaKnown RBP10.14□□□□□ -0.79
SHROOM3-204ENST00000473602 FUNDC2Q9BWH2 189 aa10.14□□□□□ -0.79
SHROOM3-204ENST00000473602 PARP11Q9NR21 331 aa10.14□□□□□ -0.79
SHROOM3-204ENST00000473602 OR2W1Q9Y3N9 320 aa10.14□□□□□ -0.79
SHROOM3-204ENST00000473602 TRAV41A0A0B4J266 112 aa10.13□□□□□ -0.79
SHROOM3-204ENST00000473602 XRCC3O43542 346 aa10.13□□□□□ -0.79
SHROOM3-204ENST00000473602 RPLP1P05386 114 aaKnown RBP10.13□□□□□ -0.79
SHROOM3-204ENST00000473602 TGFBR1P36897 503 aa10.13□□□□□ -0.79
SHROOM3-204ENST00000473602 CBX5P45973 191 aa10.13□□□□□ -0.79
SHROOM3-204ENST00000473602 LGALS7P47929 136 aa10.13□□□□□ -0.79
SHROOM3-204ENST00000473602 LUMP51884 338 aaPredicted RBP10.13□□□□□ -0.79
SHROOM3-204ENST00000473602 LSM3P62310 102 aaKnown RBP10.13□□□□□ -0.79
SHROOM3-204ENST00000473602 CX3CL1P78423 397 aa10.13□□□□□ -0.79
SHROOM3-204ENST00000473602 PSG5Q15238 335 aa10.13□□□□□ -0.79
SHROOM3-204ENST00000473602 ETV3LQ6ZN32 361 aa10.13□□□□□ -0.79
SHROOM3-204ENST00000473602 C8orf86Q6ZUL3 223 aa10.13□□□□□ -0.79
SHROOM3-204ENST00000473602 ZNF645Q8N7E2 425 aa10.13□□□□□ -0.79
SHROOM3-204ENST00000473602 LINC00482Q8N8I6 264 aa10.13□□□□□ -0.79
SHROOM3-204ENST00000473602 BEST4Q8NFU0 473 aa10.13□□□□□ -0.79
SHROOM3-204ENST00000473602 MYOZ3Q8TDC0 251 aa10.13□□□□□ -0.79
SHROOM3-204ENST00000473602 SLC25A46Q96AG3 418 aa10.13□□□□□ -0.79
SHROOM3-204ENST00000473602 S100A16Q96FQ6 103 aaKnown RBP10.13□□□□□ -0.79
SHROOM3-204ENST00000473602 GPR61Q9BZJ8 451 aa10.13□□□□□ -0.79
SHROOM3-204ENST00000473602 AUNIPQ9H7T9 357 aa10.13□□□□□ -0.79
SHROOM3-204ENST00000473602 METTL1Q9UBP6 276 aaKnown RBP10.13□□□□□ -0.79
SHROOM3-204ENST00000473602 DYNC2H1Q8NCM8 4307 aaKnown RBP10.13□□□□□ -0.79
SHROOM3-204ENST00000473602 IGLV1-40P01703 118 aa10.12□□□□□ -0.79
SHROOM3-204ENST00000473602 HLA-DQB1P01920 261 aa10.12□□□□□ -0.79
SHROOM3-204ENST00000473602 DUTP33316 252 aaKnown RBP10.12□□□□□ -0.79
SHROOM3-204ENST00000473602 TMEM267Q0VDI3 215 aaPredicted RBP10.12□□□□□ -0.79
SHROOM3-204ENST00000473602 TMEM177Q53S58 311 aa10.12□□□□□ -0.79
SHROOM3-204ENST00000473602 C19orf54Q5BKX5 351 aa10.12□□□□□ -0.79
SHROOM3-204ENST00000473602 TMEM65Q6PI78 240 aa10.12□□□□□ -0.79
SHROOM3-204ENST00000473602 ZNF562Q6V9R5 426 aa10.12□□□□□ -0.79
SHROOM3-204ENST00000473602 HOGA1Q86XE5 327 aa10.12□□□□□ -0.79
SHROOM3-204ENST00000473602 MRPL41Q8IXM3 137 aaKnown RBP10.12□□□□□ -0.79
SHROOM3-204ENST00000473602 MINDY2Q8NBR6 621 aa10.12□□□□□ -0.79
SHROOM3-204ENST00000473602 C4orf3Q8WVX3 66 aa10.12□□□□□ -0.79
SHROOM3-204ENST00000473602 DDB2Q92466 427 aa10.12□□□□□ -0.79
SHROOM3-204ENST00000473602 C5orf30Q96GV9 206 aa10.12□□□□□ -0.79
SHROOM3-204ENST00000473602 P2RX4Q99571 388 aa10.12□□□□□ -0.79
SHROOM3-204ENST00000473602 WSB1Q9Y6I7 421 aa10.12□□□□□ -0.79
SHROOM3-204ENST00000473602 G3V318 75 aa10.11□□□□□ -0.79
SHROOM3-204ENST00000473602 SLC25A17O43808 307 aa10.11□□□□□ -0.79
SHROOM3-204ENST00000473602 SMIM18P0DKX4 95 aa10.11□□□□□ -0.79
SHROOM3-204ENST00000473602 NFYAP23511 347 aaPredicted RBP10.11□□□□□ -0.79
SHROOM3-204ENST00000473602 LINC00205P59089 165 aa10.11□□□□□ -0.79
SHROOM3-204ENST00000473602 ARPC4P59998 168 aa10.11□□□□□ -0.79
SHROOM3-204ENST00000473602 NCS1P62166 190 aa10.11□□□□□ -0.79
SHROOM3-204ENST00000473602 NDPQ00604 133 aa10.11□□□□□ -0.79
SHROOM3-204ENST00000473602 AKIRIN2Q53H80 203 aa10.11□□□□□ -0.79
SHROOM3-204ENST00000473602 PYHIN1Q6K0P9 492 aa10.11□□□□□ -0.79
SHROOM3-204ENST00000473602 PPP1R27Q86WC6 154 aa10.11□□□□□ -0.79
SHROOM3-204ENST00000473602 SAMD12Q8N8I0 201 aa10.11□□□□□ -0.79
SHROOM3-204ENST00000473602 UBE2E2Q96LR5 201 aa10.11□□□□□ -0.79
SHROOM3-204ENST00000473602 HARBI1Q96MB7 349 aa10.11□□□□□ -0.79
SHROOM3-204ENST00000473602 CMTM3Q96MX0 182 aa10.11□□□□□ -0.79
SHROOM3-204ENST00000473602 B9D2Q9BPU9 175 aa10.11□□□□□ -0.79
SHROOM3-204ENST00000473602 MCRIP2Q9BUT9 160 aaKnown RBP10.11□□□□□ -0.79
SHROOM3-204ENST00000473602 FOXA2Q9Y261 457 aaPredicted RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms