RNA–Protein interactions for RNA: ENST00000472897.5

RBM3-205, Transcript of RNA binding motif protein 3, human

TSL 5

Gene RBM3, Length 501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM3-205	ENST00000472897	C5orf30	Q96GV9	206 aa		12.51	□□□□□ -0.41
RBM3-205	ENST00000472897	ZNF2	Q9BSG1	426 aa	Predicted RBP	12.51	□□□□□ -0.41
RBM3-205	ENST00000472897	ZNF702P	Q9H963	129 aa		12.51	□□□□□ -0.41
RBM3-205	ENST00000472897	WASHC3	Q9Y3C0	194 aa		12.51	□□□□□ -0.41
RBM3-205	ENST00000472897	TENM1	Q9UKZ4	2725 aa		12.5	□□□□□ -0.41
RBM3-205	ENST00000472897	CD74	P04233	296 aa		12.5	□□□□□ -0.41
RBM3-205	ENST00000472897	DUT	P33316	252 aa	Known RBP	12.5	□□□□□ -0.41
RBM3-205	ENST00000472897	TAS2R19	P59542	299 aa		12.5	□□□□□ -0.41
RBM3-205	ENST00000472897	RNASE12	Q5GAN4	147 aa	Known RBP	12.5	□□□□□ -0.41
RBM3-205	ENST00000472897	C12orf54	Q6X4T0	127 aa		12.5	□□□□□ -0.41
RBM3-205	ENST00000472897	GLDN	Q6ZMI3	551 aa	Predicted RBP	12.5	□□□□□ -0.41
RBM3-205	ENST00000472897	PDPN	Q86YL7	162 aa		12.5	□□□□□ -0.41
RBM3-205	ENST00000472897	C5orf56	Q8N8D9	126 aa		12.5	□□□□□ -0.41
RBM3-205	ENST00000472897	NPB	Q8NG41	125 aa		12.5	□□□□□ -0.41
RBM3-205	ENST00000472897	OR2T6	Q8NHC8	308 aa		12.5	□□□□□ -0.41
RBM3-205	ENST00000472897	BORCS5	Q969J3	196 aa		12.5	□□□□□ -0.41
RBM3-205	ENST00000472897	MOB3A	Q96BX8	217 aa		12.5	□□□□□ -0.41
RBM3-205	ENST00000472897	TAS2R8	Q9NYW2	309 aa		12.5	□□□□□ -0.41
RBM3-205	ENST00000472897		V9GYH0	126 aa		12.5	□□□□□ -0.41
RBM3-205	ENST00000472897	NCBP2L	A6PVI3	153 aa	Known RBP	12.49	□□□□□ -0.41
RBM3-205	ENST00000472897	APOA2	P02652	100 aa		12.49	□□□□□ -0.41
RBM3-205	ENST00000472897	CD3D	P04234	171 aa		12.49	□□□□□ -0.41
RBM3-205	ENST00000472897	CSF1	P09603	554 aa		12.49	□□□□□ -0.41
RBM3-205	ENST00000472897	RRAS	P10301	218 aa		12.49	□□□□□ -0.41
RBM3-205	ENST00000472897	F2RL1	P55085	397 aa		12.49	□□□□□ -0.41
RBM3-205	ENST00000472897	LINC00205	P59089	165 aa		12.49	□□□□□ -0.41
RBM3-205	ENST00000472897	HERV-K104	P61576	105 aa		12.49	□□□□□ -0.41
RBM3-205	ENST00000472897	TSPAN5	P62079	268 aa		12.49	□□□□□ -0.41
RBM3-205	ENST00000472897	EIF4EBP1	Q13541	118 aa	Predicted RBP	12.49	□□□□□ -0.41
RBM3-205	ENST00000472897	SPANXN2	Q5MJ10	180 aa		12.49	□□□□□ -0.41
RBM3-205	ENST00000472897	ZNF66	Q6ZN08	573 aa		12.49	□□□□□ -0.41
RBM3-205	ENST00000472897		Q8N9W7	124 aa		12.49	□□□□□ -0.41
RBM3-205	ENST00000472897	SECTM1	Q8WVN6	248 aa		12.49	□□□□□ -0.41
RBM3-205	ENST00000472897	DDB2	Q92466	427 aa		12.49	□□□□□ -0.41
RBM3-205	ENST00000472897	RITA1	Q96K30	269 aa		12.49	□□□□□ -0.41
RBM3-205	ENST00000472897	HSD17B10	Q99714	261 aa	Known RBP	12.49	□□□□□ -0.41
RBM3-205	ENST00000472897	SLC5A7	Q9GZV3	580 aa		12.49	□□□□□ -0.41
RBM3-205	ENST00000472897	RNF114	Q9Y508	228 aa		12.49	□□□□□ -0.41
RBM3-205	ENST00000472897		H7C2Y5	167 aa		12.48	□□□□□ -0.41
RBM3-205	ENST00000472897	IFNA6	P05013	189 aa		12.48	□□□□□ -0.41
RBM3-205	ENST00000472897	GNRHR	P30968	328 aa		12.48	□□□□□ -0.41
RBM3-205	ENST00000472897	PROK1	P58294	105 aa		12.48	□□□□□ -0.41
RBM3-205	ENST00000472897	ABCA11P	Q4W5N1	156 aa		12.48	□□□□□ -0.41
RBM3-205	ENST00000472897	RNASE10	Q5GAN6	216 aa	Known RBP	12.48	□□□□□ -0.41
RBM3-205	ENST00000472897		Q6ZS46	218 aa		12.48	□□□□□ -0.41
RBM3-205	ENST00000472897	TMEM17	Q86X19	198 aa		12.48	□□□□□ -0.41
RBM3-205	ENST00000472897	ARRDC1	Q8N5I2	433 aa		12.48	□□□□□ -0.41
RBM3-205	ENST00000472897	FAM71E2	Q8N5Q1	922 aa		12.48	□□□□□ -0.41
RBM3-205	ENST00000472897	CCL28	Q9NRJ3	127 aa		12.48	□□□□□ -0.41
RBM3-205	ENST00000472897	SLC35D1	Q9NTN3	355 aa		12.48	□□□□□ -0.41
RBM3-205	ENST00000472897	LIN7C	Q9NUP9	197 aa	Known RBP	12.48	□□□□□ -0.41
RBM3-205	ENST00000472897	LINC00473	A8K010	186 aa		12.47	□□□□□ -0.41
RBM3-205	ENST00000472897		M0QYG6	137 aa		12.47	□□□□□ -0.41
RBM3-205	ENST00000472897	NDUFA3	O95167	84 aa		12.47	□□□□□ -0.41
RBM3-205	ENST00000472897	IGKV1-16	P04430	117 aa		12.47	□□□□□ -0.41
RBM3-205	ENST00000472897	UCP3	P55916	312 aa		12.47	□□□□□ -0.41
RBM3-205	ENST00000472897	FXYD4	P59646	89 aa		12.47	□□□□□ -0.41
RBM3-205	ENST00000472897	MEF2D	Q14814	521 aa		12.47	□□□□□ -0.41
RBM3-205	ENST00000472897	MMD	Q15546	238 aa		12.47	□□□□□ -0.41
RBM3-205	ENST00000472897	PYDC2	Q56P42	97 aa		12.47	□□□□□ -0.41
RBM3-205	ENST00000472897	STEAP1B	Q6NZ63	245 aa		12.47	□□□□□ -0.41
RBM3-205	ENST00000472897	LPCAT3	Q6P1A2	487 aa		12.47	□□□□□ -0.41
RBM3-205	ENST00000472897	LINC00299	Q6ZSB3	139 aa		12.47	□□□□□ -0.41
RBM3-205	ENST00000472897	MFSD4A	Q8N468	514 aa		12.47	□□□□□ -0.41
RBM3-205	ENST00000472897	BVES	Q8NE79	360 aa		12.47	□□□□□ -0.41
RBM3-205	ENST00000472897	FLYWCH2	Q96CP2	140 aa	Known RBP	12.47	□□□□□ -0.41
RBM3-205	ENST00000472897	RASL11B	Q9BPW5	248 aa		12.47	□□□□□ -0.41
RBM3-205	ENST00000472897	THAP7	Q9BT49	309 aa	Predicted RBP	12.47	□□□□□ -0.41
RBM3-205	ENST00000472897	ZNF747	Q9BV97	191 aa		12.47	□□□□□ -0.41
RBM3-205	ENST00000472897	TINAGL1	Q9GZM7	467 aa	Predicted RBP	12.47	□□□□□ -0.41
RBM3-205	ENST00000472897	SERTAD4	Q9NUC0	356 aa		12.47	□□□□□ -0.41
RBM3-205	ENST00000472897	PRELID3B	Q9Y3B1	194 aa		12.47	□□□□□ -0.41
RBM3-205	ENST00000472897	STAB1	Q9NY15	2570 aa		12.46	□□□□□ -0.41
RBM3-205	ENST00000472897	ANKRD20A5P	A0PJZ0	165 aa		12.46	□□□□□ -0.41
RBM3-205	ENST00000472897	NBR2	O15453	112 aa		12.46	□□□□□ -0.41
RBM3-205	ENST00000472897	RAB3D	O95716	219 aa		12.46	□□□□□ -0.41
RBM3-205	ENST00000472897	IGHG2	P01859	326 aa		12.46	□□□□□ -0.41
RBM3-205	ENST00000472897	LGALS7	P47929	136 aa		12.46	□□□□□ -0.41
RBM3-205	ENST00000472897	RPL30	P62888	115 aa	Known RBP	12.46	□□□□□ -0.41
RBM3-205	ENST00000472897	CBX3	Q13185	183 aa		12.46	□□□□□ -0.41
RBM3-205	ENST00000472897	ZNF79	Q15937	498 aa		12.46	□□□□□ -0.41
RBM3-205	ENST00000472897	RTL8B	Q17RB0	113 aa		12.46	□□□□□ -0.41
RBM3-205	ENST00000472897	CNPY1	Q3B7I2	92 aa		12.46	□□□□□ -0.41
RBM3-205	ENST00000472897	TMEM177	Q53S58	311 aa		12.46	□□□□□ -0.41
RBM3-205	ENST00000472897	AADACL3	Q5VUY0	350 aa		12.46	□□□□□ -0.41
RBM3-205	ENST00000472897	LHFPL1	Q86WI0	220 aa		12.46	□□□□□ -0.41
RBM3-205	ENST00000472897		Q8N402	240 aa		12.46	□□□□□ -0.41
RBM3-205	ENST00000472897	C3orf56	Q8N813	242 aa		12.46	□□□□□ -0.41
RBM3-205	ENST00000472897	RBMXL1	Q96E39	390 aa	Known RBP	12.46	□□□□□ -0.41
RBM3-205	ENST00000472897	TSNAX	Q99598	290 aa	Known RBP	12.46	□□□□□ -0.41
RBM3-205	ENST00000472897	KIAA1456	Q9P272	454 aa		12.46	□□□□□ -0.41
RBM3-205	ENST00000472897	SIGLEC9	Q9Y336	463 aa		12.46	□□□□□ -0.41
RBM3-205	ENST00000472897	SPDEF	O95238	335 aa		12.45	□□□□□ -0.42
RBM3-205	ENST00000472897	AKAIN1	P0CW23	69 aa		12.45	□□□□□ -0.42
RBM3-205	ENST00000472897	CNTFR	P26992	372 aa		12.45	□□□□□ -0.42
RBM3-205	ENST00000472897	VDAC2	P45880	294 aa	Predicted RBP	12.45	□□□□□ -0.42
RBM3-205	ENST00000472897	RPS16	P62249	146 aa	Known RBP	12.45	□□□□□ -0.42
RBM3-205	ENST00000472897	C5orf64	Q2M2E5	130 aa		12.45	□□□□□ -0.42
RBM3-205	ENST00000472897	ZNF818P	Q6ZRF7	136 aa		12.45	□□□□□ -0.42
RBM3-205	ENST00000472897	KCTD9	Q7L273	389 aa		12.45	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms