RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 LOC100130705A0A1B0GUX0 176 aa7□□□□□ -1.29
VCL-204ENST00000472585 C13orf42A0A1B0GVH6 325 aa7□□□□□ -1.29
VCL-204ENST00000472585 TMEM238LA0A1B0GVL6 79 aa7□□□□□ -1.29
VCL-204ENST00000472585 SNTNA6NMZ2 147 aa7□□□□□ -1.29
VCL-204ENST00000472585 H7C2Y5 167 aa7□□□□□ -1.29
VCL-204ENST00000472585 RBBP9O75884 186 aa7□□□□□ -1.29
VCL-204ENST00000472585 APELAP0DMC3 54 aa7□□□□□ -1.29
VCL-204ENST00000472585 MC5RP33032 325 aa7□□□□□ -1.29
VCL-204ENST00000472585 RPS16P62249 146 aaKnown RBP7□□□□□ -1.29
VCL-204ENST00000472585 INSL4Q14641 139 aa7□□□□□ -1.29
VCL-204ENST00000472585 LGALS9CQ6DKI2 356 aa7□□□□□ -1.29
VCL-204ENST00000472585 C5orf30Q96GV9 206 aa7□□□□□ -1.29
VCL-204ENST00000472585 RNF5Q99942 180 aa7□□□□□ -1.29
VCL-204ENST00000472585 NEURL2Q9BR09 285 aa7□□□□□ -1.29
VCL-204ENST00000472585 NICN1Q9BSH3 213 aa7□□□□□ -1.29
VCL-204ENST00000472585 HDHD3Q9BSH5 251 aaPredicted RBP7□□□□□ -1.29
VCL-204ENST00000472585 TINAGL1Q9GZM7 467 aaPredicted RBP7□□□□□ -1.29
VCL-204ENST00000472585 SLC2A8Q9NY64 477 aa7□□□□□ -1.29
VCL-204ENST00000472585 RPL36Q9Y3U8 105 aaKnown RBP7□□□□□ -1.29
VCL-204ENST00000472585 H3BUA1 57 aa6.99□□□□□ -1.29
VCL-204ENST00000472585 BMPR1BO00238 502 aa6.99□□□□□ -1.29
VCL-204ENST00000472585 PRH1P02810 166 aa6.99□□□□□ -1.29
VCL-204ENST00000472585 SCTP09683 121 aa6.99□□□□□ -1.29
VCL-204ENST00000472585 MED14OSP0DP75 135 aa6.99□□□□□ -1.29
VCL-204ENST00000472585 DCKP27707 260 aa6.99□□□□□ -1.29
VCL-204ENST00000472585 CEACAM6P40199 344 aa6.99□□□□□ -1.29
VCL-204ENST00000472585 ZNF45Q02386 682 aa6.99□□□□□ -1.29
VCL-204ENST00000472585 UNC119Q13432 240 aa6.99□□□□□ -1.29
VCL-204ENST00000472585 TATDN3Q17R31 274 aa6.99□□□□□ -1.29
VCL-204ENST00000472585 DEFB114Q30KQ6 69 aa6.99□□□□□ -1.29
VCL-204ENST00000472585 CDH26Q8IXH8 852 aa6.99□□□□□ -1.29
VCL-204ENST00000472585 BVESQ8NE79 360 aa6.99□□□□□ -1.29
VCL-204ENST00000472585 Q96MT0 163 aa6.99□□□□□ -1.29
VCL-204ENST00000472585 DERL3Q96Q80 235 aa6.99□□□□□ -1.29
VCL-204ENST00000472585 MYCBPQ99417 103 aaPredicted RBP6.99□□□□□ -1.29
VCL-204ENST00000472585 OVOL2Q9BRP0 275 aa6.99□□□□□ -1.29
VCL-204ENST00000472585 SRD5A3Q9H8P0 318 aa6.99□□□□□ -1.29
VCL-204ENST00000472585 LRRC42Q9Y546 428 aa6.99□□□□□ -1.29
VCL-204ENST00000472585 VPS13DQ5THJ4 4388 aa6.99□□□□□ -1.29
VCL-204ENST00000472585 A0A0G2JLM5 398 aa6.98□□□□□ -1.29
VCL-204ENST00000472585 PNMA8CA0A1B0GUJ8 204 aa6.98□□□□□ -1.29
VCL-204ENST00000472585 OR11H12B2RN74 326 aa6.98□□□□□ -1.29
VCL-204ENST00000472585 ITGB1BP1O14713 200 aa6.98□□□□□ -1.29
VCL-204ENST00000472585 SLC22A1O15245 554 aa6.98□□□□□ -1.29
VCL-204ENST00000472585 CPEP16870 476 aa6.98□□□□□ -1.29
VCL-204ENST00000472585 CAPGP40121 348 aa6.98□□□□□ -1.29
VCL-204ENST00000472585 RPS27AP62979 156 aaKnown RBP6.98□□□□□ -1.29
VCL-204ENST00000472585 QRFPP83859 136 aa6.98□□□□□ -1.29
VCL-204ENST00000472585 MOGAT2Q3SYC2 334 aa6.98□□□□□ -1.29
VCL-204ENST00000472585 YIF1BQ5BJH7 314 aa6.98□□□□□ -1.29
VCL-204ENST00000472585 PTX4Q96A99 478 aa6.98□□□□□ -1.29
VCL-204ENST00000472585 STEAP1Q9UHE8 339 aa6.98□□□□□ -1.29
VCL-204ENST00000472585 ORC6Q9Y5N6 252 aa6.98□□□□□ -1.29
VCL-204ENST00000472585 MSGN1A6NI15 193 aa6.97□□□□□ -1.29
VCL-204ENST00000472585 FOXI3A8MTJ6 420 aaPredicted RBP6.97□□□□□ -1.29
VCL-204ENST00000472585 DYNC1I1O14576 645 aa6.97□□□□□ -1.29
VCL-204ENST00000472585 OR2A4O95047 310 aa6.97□□□□□ -1.29
VCL-204ENST00000472585 NDUFB8O95169 186 aa6.97□□□□□ -1.29
VCL-204ENST00000472585 SPDEFO95238 335 aa6.97□□□□□ -1.29
VCL-204ENST00000472585 HLA-AP01891 365 aaKnown RBP6.97□□□□□ -1.29
VCL-204ENST00000472585 CD3GP09693 182 aa6.97□□□□□ -1.29
VCL-204ENST00000472585 CD37P11049 281 aa6.97□□□□□ -1.29
VCL-204ENST00000472585 TMEM50BP56557 158 aa6.97□□□□□ -1.29
VCL-204ENST00000472585 LAIR2Q6ISS4 152 aa6.97□□□□□ -1.29
VCL-204ENST00000472585 TMPRSS11AQ6ZMR5 421 aa6.97□□□□□ -1.29
VCL-204ENST00000472585 LRRTM1Q86UE6 522 aa6.97□□□□□ -1.29
VCL-204ENST00000472585 LAX1Q8IWV1 398 aa6.97□□□□□ -1.29
VCL-204ENST00000472585 ADAD2Q8NCV1 583 aaKnown RBP6.97□□□□□ -1.29
VCL-204ENST00000472585 OR2K2Q8NGT1 345 aa6.97□□□□□ -1.29
VCL-204ENST00000472585 WDR89Q96FK6 387 aaPredicted RBP6.97□□□□□ -1.29
VCL-204ENST00000472585 NEDD4LQ96PU5 975 aa6.97□□□□□ -1.29
VCL-204ENST00000472585 TSNAXQ99598 290 aaKnown RBP6.97□□□□□ -1.29
VCL-204ENST00000472585 TM2D1Q9BX74 207 aa6.97□□□□□ -1.29
VCL-204ENST00000472585 AKIP1Q9NQ31 210 aa6.97□□□□□ -1.29
VCL-204ENST00000472585 ABRACLQ9P1F3 81 aa6.97□□□□□ -1.29
VCL-204ENST00000472585 ZNF230Q9UIE0 474 aaPredicted RBP6.97□□□□□ -1.29
VCL-204ENST00000472585 AK3Q9UIJ7 227 aa6.97□□□□□ -1.29
VCL-204ENST00000472585 DIMT1Q9UNQ2 313 aaKnown RBP6.97□□□□□ -1.29
VCL-204ENST00000472585 TRBV6-6A0A0A6YYG2 114 aa6.96□□□□□ -1.3
VCL-204ENST00000472585 TRBV9A0A0B4J1U6 114 aa6.96□□□□□ -1.3
VCL-204ENST00000472585 A0A0J9YWU9 116 aa6.96□□□□□ -1.3
VCL-204ENST00000472585 TMEM14DPA8MWL7 114 aa6.96□□□□□ -1.3
VCL-204ENST00000472585 SOCS1O15524 211 aa6.96□□□□□ -1.3
VCL-204ENST00000472585 KIR2DS2P43631 304 aa6.96□□□□□ -1.3
VCL-204ENST00000472585 RPEL1Q2QD12 228 aa6.96□□□□□ -1.3
VCL-204ENST00000472585 C1orf100Q5SVJ3 147 aa6.96□□□□□ -1.3
VCL-204ENST00000472585 C19orf35Q6ZS72 473 aa6.96□□□□□ -1.3
VCL-204ENST00000472585 Q8N3U1 123 aa6.96□□□□□ -1.3
VCL-204ENST00000472585 SETD6Q8TBK2 473 aa6.96□□□□□ -1.3
VCL-204ENST00000472585 CACNG8Q8WXS5 425 aa6.96□□□□□ -1.3
VCL-204ENST00000472585 GGHQ92820 318 aa6.96□□□□□ -1.3
VCL-204ENST00000472585 USMG5Q96IX5 58 aa6.96□□□□□ -1.3
VCL-204ENST00000472585 UQCC2Q9BRT2 126 aa6.96□□□□□ -1.3
VCL-204ENST00000472585 Q9N2K0 584 aa6.96□□□□□ -1.3
VCL-204ENST00000472585 ZC4H2Q9NQZ6 224 aa6.96□□□□□ -1.3
VCL-204ENST00000472585 COA4Q9NYJ1 87 aa6.96□□□□□ -1.3
VCL-204ENST00000472585 CKLFQ9UBR5 152 aa6.96□□□□□ -1.3
VCL-204ENST00000472585 LOC100996750A0A140TA64 210 aa6.95□□□□□ -1.3
VCL-204ENST00000472585 C2orf70A6NJV1 201 aa6.95□□□□□ -1.3
VCL-204ENST00000472585 PPP5D1E7EU14 171 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms