RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 CA2P00918 260 aa7□□□□□ -1.29
USF1-204ENST00000472217 APOA2P02652 100 aa7□□□□□ -1.29
USF1-204ENST00000472217 OR8U8P0C7N1 319 aa7□□□□□ -1.29
USF1-204ENST00000472217 OR8U9P0C7N5 309 aa7□□□□□ -1.29
USF1-204ENST00000472217 GSTT2P0CG29 244 aa7□□□□□ -1.29
USF1-204ENST00000472217 GSTT2BP0CG30 244 aa7□□□□□ -1.29
USF1-204ENST00000472217 PSMB9P28065 219 aa7□□□□□ -1.29
USF1-204ENST00000472217 RPS16P62249 146 aaKnown RBP7□□□□□ -1.29
USF1-204ENST00000472217 C11orf87Q6NUJ2 197 aa7□□□□□ -1.29
USF1-204ENST00000472217 PPP1R27Q86WC6 154 aa7□□□□□ -1.29
USF1-204ENST00000472217 PDPNQ86YL7 162 aa7□□□□□ -1.29
USF1-204ENST00000472217 SPARTQ8N0X7 666 aa7□□□□□ -1.29
USF1-204ENST00000472217 TCTEX1D1Q8N7M0 179 aa7□□□□□ -1.29
USF1-204ENST00000472217 OR1N2Q8NGR9 330 aa7□□□□□ -1.29
USF1-204ENST00000472217 OR10J5Q8NHC4 309 aa7□□□□□ -1.29
USF1-204ENST00000472217 C5orf30Q96GV9 206 aa7□□□□□ -1.29
USF1-204ENST00000472217 CLCC1Q96S66 551 aa7□□□□□ -1.29
USF1-204ENST00000472217 TSNAXQ99598 290 aaKnown RBP7□□□□□ -1.29
USF1-204ENST00000472217 FAM103A1Q9BTL3 118 aaKnown RBP7□□□□□ -1.29
USF1-204ENST00000472217 ALX4Q9H161 411 aaPredicted RBP7□□□□□ -1.29
USF1-204ENST00000472217 OR2D2Q9H210 308 aa7□□□□□ -1.29
USF1-204ENST00000472217 SLC35D1Q9NTN3 355 aa7□□□□□ -1.29
USF1-204ENST00000472217 ZMAT5Q9UDW3 170 aaKnown RBP7□□□□□ -1.29
USF1-204ENST00000472217 SCOCQ9UIL1 159 aa7□□□□□ -1.29
USF1-204ENST00000472217 ELF5Q9UKW6 265 aaPredicted RBP7□□□□□ -1.29
USF1-204ENST00000472217 NUBP2Q9Y5Y2 271 aa7□□□□□ -1.29
USF1-204ENST00000472217 IGKV1D-8A0A087WSZ0 117 aa6.99□□□□□ -1.29
USF1-204ENST00000472217 SLC25A17O43808 307 aa6.99□□□□□ -1.29
USF1-204ENST00000472217 DIRAS3O95661 229 aa6.99□□□□□ -1.29
USF1-204ENST00000472217 FGF9P31371 208 aaPredicted RBP6.99□□□□□ -1.29
USF1-204ENST00000472217 CD69Q07108 199 aa6.99□□□□□ -1.29
USF1-204ENST00000472217 TMEM267Q0VDI3 215 aaPredicted RBP6.99□□□□□ -1.29
USF1-204ENST00000472217 ARFRP1Q13795 201 aa6.99□□□□□ -1.29
USF1-204ENST00000472217 ZNF260Q3ZCT1 412 aa6.99□□□□□ -1.29
USF1-204ENST00000472217 AKIRIN2Q53H80 203 aa6.99□□□□□ -1.29
USF1-204ENST00000472217 ACTBL2Q562R1 376 aa6.99□□□□□ -1.29
USF1-204ENST00000472217 UNQ5815/PRO19632Q6UWF5 114 aa6.99□□□□□ -1.29
USF1-204ENST00000472217 ZNF562Q6V9R5 426 aa6.99□□□□□ -1.29
USF1-204ENST00000472217 LFNGQ8NES3 379 aa6.99□□□□□ -1.29
USF1-204ENST00000472217 ARPC1AQ92747 370 aa6.99□□□□□ -1.29
USF1-204ENST00000472217 FLYWCH2Q96CP2 140 aaKnown RBP6.99□□□□□ -1.29
USF1-204ENST00000472217 PRR25Q96S07 402 aa6.99□□□□□ -1.29
USF1-204ENST00000472217 B9D2Q9BPU9 175 aa6.99□□□□□ -1.29
USF1-204ENST00000472217 ATG5Q9H1Y0 275 aa6.99□□□□□ -1.29
USF1-204ENST00000472217 Q9H521 79 aa6.99□□□□□ -1.29
USF1-204ENST00000472217 TXNL4BQ9NX01 149 aaKnown RBP6.99□□□□□ -1.29
USF1-204ENST00000472217 SDHAF2Q9NX18 166 aa6.99□□□□□ -1.29
USF1-204ENST00000472217 NOTOA8MTQ0 251 aa6.98□□□□□ -1.29
USF1-204ENST00000472217 ARPC1BO15143 372 aaKnown RBP6.98□□□□□ -1.29
USF1-204ENST00000472217 IGLV2-23P01705 113 aa6.98□□□□□ -1.29
USF1-204ENST00000472217 LGALS1P09382 135 aaKnown RBP6.98□□□□□ -1.29
USF1-204ENST00000472217 TALDO1P37837 337 aa6.98□□□□□ -1.29
USF1-204ENST00000472217 ECI1P42126 302 aa6.98□□□□□ -1.29
USF1-204ENST00000472217 SLURP1P55000 103 aa6.98□□□□□ -1.29
USF1-204ENST00000472217 SSBP2P81877 361 aaPredicted RBP6.98□□□□□ -1.29
USF1-204ENST00000472217 DCTN2Q13561 401 aaKnown RBP6.98□□□□□ -1.29
USF1-204ENST00000472217 FXYD3Q14802 87 aa6.98□□□□□ -1.29
USF1-204ENST00000472217 SRSF7Q16629 238 aaKnown RBP eCLIP6.98□□□□□ -1.29
USF1-204ENST00000472217 CDNFQ49AH0 187 aa6.98□□□□□ -1.29
USF1-204ENST00000472217 VAX1Q5SQQ9 334 aa6.98□□□□□ -1.29
USF1-204ENST00000472217 PYHIN1Q6K0P9 492 aa6.98□□□□□ -1.29
USF1-204ENST00000472217 Q6ZS49 121 aa6.98□□□□□ -1.29
USF1-204ENST00000472217 H1FOOQ8IZA3 346 aaPredicted RBP6.98□□□□□ -1.29
USF1-204ENST00000472217 GRPEL2Q8TAA5 225 aa6.98□□□□□ -1.29
USF1-204ENST00000472217 DCUN1D4Q92564 292 aa6.98□□□□□ -1.29
USF1-204ENST00000472217 FCGR1BQ92637 280 aa6.98□□□□□ -1.29
USF1-204ENST00000472217 MS4A10Q96PG2 267 aa6.98□□□□□ -1.29
USF1-204ENST00000472217 GINS4Q9BRT9 223 aa6.98□□□□□ -1.29
USF1-204ENST00000472217 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.98□□□□□ -1.29
USF1-204ENST00000472217 STUB1Q9UNE7 303 aa6.98□□□□□ -1.29
USF1-204ENST00000472217 DNAH3Q8TD57 4116 aa6.97□□□□□ -1.29
USF1-204ENST00000472217 IGHV4OR15-8A0A075B7B6 117 aa6.97□□□□□ -1.29
USF1-204ENST00000472217 A0A087WW49 117 aa6.97□□□□□ -1.29
USF1-204ENST00000472217 LINC01619G3V211 115 aa6.97□□□□□ -1.29
USF1-204ENST00000472217 OVOL1O14753 267 aa6.97□□□□□ -1.29
USF1-204ENST00000472217 IGHV3-11P01762 117 aa6.97□□□□□ -1.29
USF1-204ENST00000472217 CRYGBP07316 175 aa6.97□□□□□ -1.29
USF1-204ENST00000472217 DTYMKP23919 212 aa6.97□□□□□ -1.29
USF1-204ENST00000472217 LGALS7P47929 136 aa6.97□□□□□ -1.29
USF1-204ENST00000472217 INSL3P51460 131 aa6.97□□□□□ -1.29
USF1-204ENST00000472217 TPPP2P59282 170 aa6.97□□□□□ -1.29
USF1-204ENST00000472217 PJVKQ0ZLH3 352 aa6.97□□□□□ -1.29
USF1-204ENST00000472217 ARL6IP1Q15041 203 aa6.97□□□□□ -1.29
USF1-204ENST00000472217 TMEM177Q53S58 311 aa6.97□□□□□ -1.29
USF1-204ENST00000472217 SFXN4Q6P4A7 337 aa6.97□□□□□ -1.29
USF1-204ENST00000472217 TPRA1Q86W33 373 aa6.97□□□□□ -1.29
USF1-204ENST00000472217 BVESQ8NE79 360 aa6.97□□□□□ -1.29
USF1-204ENST00000472217 LGALS14Q8TCE9 139 aa6.97□□□□□ -1.29
USF1-204ENST00000472217 DLX4Q92988 240 aaPredicted RBP6.97□□□□□ -1.29
USF1-204ENST00000472217 HARBI1Q96MB7 349 aa6.97□□□□□ -1.29
USF1-204ENST00000472217 YTHDF1Q9BYJ9 559 aaKnown RBP6.97□□□□□ -1.29
USF1-204ENST00000472217 OR51E2Q9H255 320 aa6.97□□□□□ -1.29
USF1-204ENST00000472217 DAPK2Q9UIK4 370 aa6.97□□□□□ -1.29
USF1-204ENST00000472217 SSR3Q9UNL2 185 aa6.97□□□□□ -1.29
USF1-204ENST00000472217 ZNF256Q9Y2P7 627 aaPredicted RBP6.97□□□□□ -1.29
USF1-204ENST00000472217 RRP15Q9Y3B9 282 aaKnown RBP6.97□□□□□ -1.29
USF1-204ENST00000472217 LSM4Q9Y4Z0 139 aaKnown RBP6.97□□□□□ -1.29
USF1-204ENST00000472217 RBM7Q9Y580 266 aaKnown RBP6.97□□□□□ -1.29
USF1-204ENST00000472217 TMEM235A6NFC5 223 aa6.96□□□□□ -1.3
USF1-204ENST00000472217 SRRM4A7MD48 611 aaKnown RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms