RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 SMIM4Q8WVI0 70 aa12.03□□□□□ -0.48
SNX13-205ENST00000471744 WFDC12Q8WWY7 111 aa12.03□□□□□ -0.48
SNX13-205ENST00000471744 RASL11BQ9BPW5 248 aa12.03□□□□□ -0.48
SNX13-205ENST00000471744 KIAA1456Q9P272 454 aa12.03□□□□□ -0.48
SNX13-205ENST00000471744 RBMX2Q9Y388 322 aaKnown RBP12.03□□□□□ -0.48
SNX13-205ENST00000471744 IGKV1D-13A0A0B4J2D9 117 aa12.02□□□□□ -0.49
SNX13-205ENST00000471744 FABP12A6NFH5 140 aa12.02□□□□□ -0.49
SNX13-205ENST00000471744 NBR2O15453 112 aa12.02□□□□□ -0.49
SNX13-205ENST00000471744 PEX14O75381 377 aa12.02□□□□□ -0.49
SNX13-205ENST00000471744 PMP2P02689 132 aa12.02□□□□□ -0.49
SNX13-205ENST00000471744 AMY1AP04745 511 aa12.02□□□□□ -0.49
SNX13-205ENST00000471744 AMY2AP04746 511 aa12.02□□□□□ -0.49
SNX13-205ENST00000471744 IGKV1-13P0DP09 117 aa12.02□□□□□ -0.49
SNX13-205ENST00000471744 RFX2P48378 723 aa12.02□□□□□ -0.49
SNX13-205ENST00000471744 RTL8BQ17RB0 113 aa12.02□□□□□ -0.49
SNX13-205ENST00000471744 GLDNQ6ZMI3 551 aaPredicted RBP12.02□□□□□ -0.49
SNX13-205ENST00000471744 Q8N9W7 124 aa12.02□□□□□ -0.49
SNX13-205ENST00000471744 ZNF383Q8NA42 475 aa12.02□□□□□ -0.49
SNX13-205ENST00000471744 DRAXINQ8NBI3 349 aaPredicted RBP12.02□□□□□ -0.49
SNX13-205ENST00000471744 OR6F1Q8NGZ6 308 aa12.02□□□□□ -0.49
SNX13-205ENST00000471744 TSNAXQ99598 290 aaKnown RBP12.02□□□□□ -0.49
SNX13-205ENST00000471744 HSD17B10Q99714 261 aaKnown RBP12.02□□□□□ -0.49
SNX13-205ENST00000471744 PLSCR3Q9NRY6 295 aa12.02□□□□□ -0.49
SNX13-205ENST00000471744 SLC35D1Q9NTN3 355 aa12.02□□□□□ -0.49
SNX13-205ENST00000471744 KLK11Q9UBX7 282 aa12.02□□□□□ -0.49
SNX13-205ENST00000471744 PRELID3BQ9Y3B1 194 aa12.02□□□□□ -0.49
SNX13-205ENST00000471744 PLXNB1O43157 2135 aa12.01□□□□□ -0.49
SNX13-205ENST00000471744 J3QRK9 145 aa12.01□□□□□ -0.49
SNX13-205ENST00000471744 KCNAB3O43448 404 aa12.01□□□□□ -0.49
SNX13-205ENST00000471744 PTBP1P26599 531 aaKnown RBP eCLIP12.01□□□□□ -0.492e-13■■■■■ 28.1
SNX13-205ENST00000471744 DUTP33316 252 aaKnown RBP12.01□□□□□ -0.49
SNX13-205ENST00000471744 TAS2R19P59542 299 aa12.01□□□□□ -0.49
SNX13-205ENST00000471744 TSPAN5P62079 268 aa12.01□□□□□ -0.49
SNX13-205ENST00000471744 RNASE12Q5GAN4 147 aaKnown RBP12.01□□□□□ -0.49
SNX13-205ENST00000471744 C9orf152Q5JTZ5 239 aa12.01□□□□□ -0.49
SNX13-205ENST00000471744 VAX1Q5SQQ9 334 aa12.01□□□□□ -0.49
SNX13-205ENST00000471744 ZNF660Q6AZW8 331 aaPredicted RBP12.01□□□□□ -0.49
SNX13-205ENST00000471744 ZNF66Q6ZN08 573 aa12.01□□□□□ -0.49
SNX13-205ENST00000471744 TMEM17Q86X19 198 aa12.01□□□□□ -0.49
SNX13-205ENST00000471744 FAM71E2Q8N5Q1 922 aa12.01□□□□□ -0.49
SNX13-205ENST00000471744 NPBQ8NG41 125 aa12.01□□□□□ -0.49
SNX13-205ENST00000471744 SECTM1Q8WVN6 248 aa12.01□□□□□ -0.49
SNX13-205ENST00000471744 MOB3AQ96BX8 217 aa12.01□□□□□ -0.49
SNX13-205ENST00000471744 FLYWCH2Q96CP2 140 aaKnown RBP12.01□□□□□ -0.49
SNX13-205ENST00000471744 SOSTQ9BQB4 213 aa12.01□□□□□ -0.49
SNX13-205ENST00000471744 ZNF2Q9BSG1 426 aaPredicted RBP12.01□□□□□ -0.49
SNX13-205ENST00000471744 SLC5A7Q9GZV3 580 aa12.01□□□□□ -0.49
SNX13-205ENST00000471744 SERTAD4Q9NUC0 356 aa12.01□□□□□ -0.49
SNX13-205ENST00000471744 TAS2R8Q9NYW2 309 aa12.01□□□□□ -0.49
SNX13-205ENST00000471744 SIGLEC9Q9Y336 463 aa12.01□□□□□ -0.49
SNX13-205ENST00000471744 GSTZ1O43708 216 aaPredicted RBP12□□□□□ -0.49
SNX13-205ENST00000471744 NDUFA3O95167 84 aa12□□□□□ -0.49
SNX13-205ENST00000471744 SPDEFO95238 335 aa12□□□□□ -0.49
SNX13-205ENST00000471744 IFNA6P05013 189 aa12□□□□□ -0.49
SNX13-205ENST00000471744 CSF1P09603 554 aa12□□□□□ -0.49
SNX13-205ENST00000471744 LGALS7P47929 136 aa12□□□□□ -0.49
SNX13-205ENST00000471744 F2RL1P55085 397 aa12□□□□□ -0.49
SNX13-205ENST00000471744 FXYD4P59646 89 aa12□□□□□ -0.49
SNX13-205ENST00000471744 DGCR2P98153 550 aa12□□□□□ -0.49
SNX13-205ENST00000471744 RNASE10Q5GAN6 216 aaKnown RBP12□□□□□ -0.49
SNX13-205ENST00000471744 LPCAT3Q6P1A2 487 aa12□□□□□ -0.49
SNX13-205ENST00000471744 KCTD9Q7L273 389 aa12□□□□□ -0.49
SNX13-205ENST00000471744 TMEM229BQ8NBD8 167 aa12□□□□□ -0.49
SNX13-205ENST00000471744 C5orf30Q96GV9 206 aa12□□□□□ -0.49
SNX13-205ENST00000471744 IGLV2-14P01704 120 aa11.99□□□□□ -0.49
SNX13-205ENST00000471744 IGHG2P01859 326 aa11.99□□□□□ -0.49
SNX13-205ENST00000471744 CD74P04233 296 aa11.99□□□□□ -0.49
SNX13-205ENST00000471744 KIR2DS2P43631 304 aa11.99□□□□□ -0.49
SNX13-205ENST00000471744 RPS16P62249 146 aaKnown RBP11.99□□□□□ -0.49
SNX13-205ENST00000471744 CATR1Q13166 79 aa11.99□□□□□ -0.49
SNX13-205ENST00000471744 C5orf64Q2M2E5 130 aa11.99□□□□□ -0.49
SNX13-205ENST00000471744 SPANXN2Q5MJ10 180 aa11.99□□□□□ -0.49
SNX13-205ENST00000471744 FOXB2Q5VYV0 432 aa11.99□□□□□ -0.49
SNX13-205ENST00000471744 Q6ZS46 218 aa11.99□□□□□ -0.49
SNX13-205ENST00000471744 SLC35E3Q7Z769 313 aa11.99□□□□□ -0.49
SNX13-205ENST00000471744 FOXRED2Q8IWF2 684 aa11.99□□□□□ -0.49
SNX13-205ENST00000471744 ARRDC1Q8N5I2 433 aa11.99□□□□□ -0.49
SNX13-205ENST00000471744 KLHDC1Q8N7A1 406 aa11.99□□□□□ -0.49
SNX13-205ENST00000471744 DDB2Q92466 427 aa11.99□□□□□ -0.49
SNX13-205ENST00000471744 WNT10AQ9GZT5 417 aa11.99□□□□□ -0.49
SNX13-205ENST00000471744 CCL28Q9NRJ3 127 aa11.99□□□□□ -0.49
SNX13-205ENST00000471744 TENM1Q9UKZ4 2725 aa11.99□□□□□ -0.49
SNX13-205ENST00000471744 TNCP24821 2201 aa11.98□□□□□ -0.49
SNX13-205ENST00000471744 LINC00473A8K010 186 aa11.98□□□□□ -0.49
SNX13-205ENST00000471744 RRHO14718 337 aa11.98□□□□□ -0.49
SNX13-205ENST00000471744 HLA-DRB1P01911 266 aa11.98□□□□□ -0.49
SNX13-205ENST00000471744 CD3DP04234 171 aa11.98□□□□□ -0.49
SNX13-205ENST00000471744 IGKV1-16P04430 117 aa11.98□□□□□ -0.49
SNX13-205ENST00000471744 VSIG10L2P0DP72 767 aa11.98□□□□□ -0.49
SNX13-205ENST00000471744 S100GP29377 79 aa11.98□□□□□ -0.49
SNX13-205ENST00000471744 ETV6P41212 452 aa11.98□□□□□ -0.49
SNX13-205ENST00000471744 MEF2DQ14814 521 aa11.98□□□□□ -0.49
SNX13-205ENST00000471744 TMEM177Q53S58 311 aa11.98□□□□□ -0.49
SNX13-205ENST00000471744 CCDC190Q86UF4 302 aa11.98□□□□□ -0.49
SNX13-205ENST00000471744 CMTM1Q8IZ96 169 aa11.98□□□□□ -0.49
SNX13-205ENST00000471744 BVESQ8NE79 360 aa11.98□□□□□ -0.49
SNX13-205ENST00000471744 OSR1Q8TAX0 266 aaPredicted RBP11.98□□□□□ -0.49
SNX13-205ENST00000471744 CHPT1Q8WUD6 406 aa11.98□□□□□ -0.49
SNX13-205ENST00000471744 HARBI1Q96MB7 349 aa11.98□□□□□ -0.49
SNX13-205ENST00000471744 CITED1Q99966 193 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms