RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 CRXO43186 299 aaPredicted RBP-0.09□□□□□ -2.42
PRPF40A-207ENST00000471701 NDUFB2O95178 105 aa-0.09□□□□□ -2.42
PRPF40A-207ENST00000471701 CALRP27797 417 aaKnown RBP-0.09□□□□□ -2.42
PRPF40A-207ENST00000471701 HSPA9P38646 679 aaKnown RBP-0.09□□□□□ -2.42
PRPF40A-207ENST00000471701 VSNL1P62760 191 aa-0.09□□□□□ -2.42
PRPF40A-207ENST00000471701 BSXQ3C1V8 233 aa-0.09□□□□□ -2.42
PRPF40A-207ENST00000471701 C10orf55Q5SWW7 151 aa-0.09□□□□□ -2.42
PRPF40A-207ENST00000471701 LYZL1Q6UWQ5 148 aa-0.09□□□□□ -2.42
PRPF40A-207ENST00000471701 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP-0.09□□□□□ -2.42
PRPF40A-207ENST00000471701 SLC13A5Q86YT5 568 aaPredicted RBP-0.09□□□□□ -2.42
PRPF40A-207ENST00000471701 SBSPONQ8IVN8 264 aa-0.09□□□□□ -2.42
PRPF40A-207ENST00000471701 TNFAIP8L1Q8WVP5 186 aa-0.09□□□□□ -2.42
PRPF40A-207ENST00000471701 NMNAT3Q96T66 252 aa-0.09□□□□□ -2.42
PRPF40A-207ENST00000471701 HINT2Q9BX68 163 aa-0.09□□□□□ -2.42
PRPF40A-207ENST00000471701 GNB1LQ9BYB4 327 aa-0.09□□□□□ -2.42
PRPF40A-207ENST00000471701 NKX6-2Q9C056 277 aaPredicted RBP-0.09□□□□□ -2.42
PRPF40A-207ENST00000471701 OR51B6Q9H340 312 aa-0.09□□□□□ -2.42
PRPF40A-207ENST00000471701 METTL8Q9H825 291 aaKnown RBP-0.09□□□□□ -2.42
PRPF40A-207ENST00000471701 MS4A12Q9NXJ0 267 aa-0.09□□□□□ -2.42
PRPF40A-207ENST00000471701 POLR3HQ9Y535 204 aaPredicted RBP-0.09□□□□□ -2.42
PRPF40A-207ENST00000471701 SMARCA4P51532 1647 aa-0.09□□□□□ -2.42
PRPF40A-207ENST00000471701 PTPRSQ13332 1948 aa-0.1□□□□□ -2.43
PRPF40A-207ENST00000471701 GSTZ1O43708 216 aaPredicted RBP-0.1□□□□□ -2.43
PRPF40A-207ENST00000471701 OR10J1P30954 320 aa-0.1□□□□□ -2.43
PRPF40A-207ENST00000471701 HERVK_113P63121 156 aa-0.1□□□□□ -2.43
PRPF40A-207ENST00000471701 STK38Q15208 465 aa-0.1□□□□□ -2.43
PRPF40A-207ENST00000471701 MESTQ5EB52 335 aa-0.1□□□□□ -2.43
PRPF40A-207ENST00000471701 TTC33Q6PID6 262 aaPredicted RBP-0.1□□□□□ -2.43
PRPF40A-207ENST00000471701 ZNF705AQ6ZN79 300 aaPredicted RBP-0.1□□□□□ -2.43
PRPF40A-207ENST00000471701 AHSA2Q719I0 299 aa-0.1□□□□□ -2.43
PRPF40A-207ENST00000471701 ZNF321PQ8N8H1 164 aa-0.1□□□□□ -2.43
PRPF40A-207ENST00000471701 OR2D3Q8NGH3 330 aa-0.1□□□□□ -2.43
PRPF40A-207ENST00000471701 OR51H1Q8NH63 302 aa-0.1□□□□□ -2.43
PRPF40A-207ENST00000471701 IFT81Q8WYA0 676 aa-0.1□□□□□ -2.43
PRPF40A-207ENST00000471701 SLC7A6Q92536 515 aa-0.1□□□□□ -2.43
PRPF40A-207ENST00000471701 SFRP2Q96HF1 295 aa-0.1□□□□□ -2.43
PRPF40A-207ENST00000471701 SSPOA2VEC9 5147 aa-0.1□□□□□ -2.43
PRPF40A-207ENST00000471701 FLT4P35916 1363 aa-0.1□□□□□ -2.43
PRPF40A-207ENST00000471701 SCAF11Q99590 1463 aaKnown RBP-0.1□□□□□ -2.43
PRPF40A-207ENST00000471701 SIPA1L1O43166 1804 aa-0.1□□□□□ -2.43
PRPF40A-207ENST00000471701 IGKV1D-42A0A075B6H8 117 aa-0.11□□□□□ -2.43
PRPF40A-207ENST00000471701 A0A1B0GW15 77 aa-0.11□□□□□ -2.43
PRPF40A-207ENST00000471701 MRASO14807 208 aa-0.11□□□□□ -2.43
PRPF40A-207ENST00000471701 ASS1P00966 412 aaKnown RBP-0.11□□□□□ -2.43
PRPF40A-207ENST00000471701 LGALS1P09382 135 aaKnown RBP-0.11□□□□□ -2.43
PRPF40A-207ENST00000471701 RNASE3P12724 160 aaKnown RBP-0.11□□□□□ -2.43
PRPF40A-207ENST00000471701 PTMSP20962 102 aa-0.11□□□□□ -2.43
PRPF40A-207ENST00000471701 CA5AP35218 305 aa-0.11□□□□□ -2.43
PRPF40A-207ENST00000471701 GABRA2P47869 451 aa-0.11□□□□□ -2.43
PRPF40A-207ENST00000471701 REG1BP48304 166 aa-0.11□□□□□ -2.43
PRPF40A-207ENST00000471701 TAS2R20P59543 309 aa-0.11□□□□□ -2.43
PRPF40A-207ENST00000471701 TPI1P60174 286 aa-0.11□□□□□ -2.43
PRPF40A-207ENST00000471701 GNA12Q03113 381 aa-0.11□□□□□ -2.43
PRPF40A-207ENST00000471701 C1DQ13901 141 aaKnown RBP-0.11□□□□□ -2.43
PRPF40A-207ENST00000471701 HNRNPA1L2Q32P51 320 aaKnown RBP-0.11□□□□□ -2.43
PRPF40A-207ENST00000471701 PLPPR5Q32ZL2 321 aa-0.11□□□□□ -2.43
PRPF40A-207ENST00000471701 NKAIN1Q4KMZ8 207 aa-0.11□□□□□ -2.43
PRPF40A-207ENST00000471701 SPATA31B1PQ5VZV4 182 aa-0.11□□□□□ -2.43
PRPF40A-207ENST00000471701 C1orf174Q8IYL3 243 aa-0.11□□□□□ -2.43
PRPF40A-207ENST00000471701 ZNF675Q8TD23 568 aa-0.11□□□□□ -2.43
PRPF40A-207ENST00000471701 IMMP2LQ96T52 175 aa-0.11□□□□□ -2.43
PRPF40A-207ENST00000471701 MAT2BQ9NZL9 334 aa-0.11□□□□□ -2.43
PRPF40A-207ENST00000471701 SNX10Q9Y5X0 201 aa-0.11□□□□□ -2.43
PRPF40A-207ENST00000471701 A0A1B0GX12 115 aa-0.12□□□□□ -2.43
PRPF40A-207ENST00000471701 H7C2G1 150 aa-0.12□□□□□ -2.43
PRPF40A-207ENST00000471701 PPBPP02775 128 aa-0.12□□□□□ -2.43
PRPF40A-207ENST00000471701 PTNP21246 168 aa-0.12□□□□□ -2.43
PRPF40A-207ENST00000471701 ADORA1P30542 326 aa-0.12□□□□□ -2.43
PRPF40A-207ENST00000471701 CA7P43166 264 aa-0.12□□□□□ -2.43
PRPF40A-207ENST00000471701 EVX1P49640 407 aa-0.12□□□□□ -2.43
PRPF40A-207ENST00000471701 ETV1P50549 477 aa-0.12□□□□□ -2.43
PRPF40A-207ENST00000471701 USF2Q15853 346 aaPredicted RBP-0.12□□□□□ -2.43
PRPF40A-207ENST00000471701 ATP5L2Q7Z4Y8 100 aa-0.12□□□□□ -2.43
PRPF40A-207ENST00000471701 ZNF565Q8N9K5 539 aa-0.12□□□□□ -2.43
PRPF40A-207ENST00000471701 OBSCN-AS1Q96MR7 158 aa-0.12□□□□□ -2.43
PRPF40A-207ENST00000471701 MRPL57Q9BQC6 102 aaKnown RBP-0.12□□□□□ -2.43
PRPF40A-207ENST00000471701 PRRG3Q9BZD7 231 aa-0.12□□□□□ -2.43
PRPF40A-207ENST00000471701 TIMM9Q9Y5J7 89 aa-0.12□□□□□ -2.43
PRPF40A-207ENST00000471701 SNURFQ9Y675 71 aa-0.12□□□□□ -2.43
PRPF40A-207ENST00000471701 THSD7AQ9UPZ6 1657 aa-0.12□□□□□ -2.43
PRPF40A-207ENST00000471701 TRAV7A0A075B6U4 112 aa-0.13□□□□□ -2.43
PRPF40A-207ENST00000471701 IBA57-AS1B1ANH7 110 aa-0.13□□□□□ -2.43
PRPF40A-207ENST00000471701 H3BT86 120 aa-0.13□□□□□ -2.43
PRPF40A-207ENST00000471701 SNAP29O95721 258 aa-0.13□□□□□ -2.43
PRPF40A-207ENST00000471701 CD79BP40259 229 aa-0.13□□□□□ -2.43
PRPF40A-207ENST00000471701 RPL28P46779 137 aaKnown RBP-0.13□□□□□ -2.43
PRPF40A-207ENST00000471701 PSMD7P51665 324 aa-0.13□□□□□ -2.43
PRPF40A-207ENST00000471701 RAB31Q13636 194 aa-0.13□□□□□ -2.43
PRPF40A-207ENST00000471701 VAMP3Q15836 100 aa-0.13□□□□□ -2.43
PRPF40A-207ENST00000471701 MRPL52Q86TS9 123 aaKnown RBP-0.13□□□□□ -2.43
PRPF40A-207ENST00000471701 BAP18Q8IXM2 172 aa-0.13□□□□□ -2.43
PRPF40A-207ENST00000471701 LRRC34Q8IZ02 419 aa-0.13□□□□□ -2.43
PRPF40A-207ENST00000471701 UMODL1-AS1Q8N2C9 162 aa-0.13□□□□□ -2.43
PRPF40A-207ENST00000471701 Q8N6K4 173 aa-0.13□□□□□ -2.43
PRPF40A-207ENST00000471701 CCDC127Q96BQ5 260 aa-0.13□□□□□ -2.43
PRPF40A-207ENST00000471701 LRRC39Q96DD0 335 aa-0.13□□□□□ -2.43
PRPF40A-207ENST00000471701 TMA16Q96EY4 203 aaKnown RBP-0.13□□□□□ -2.43
PRPF40A-207ENST00000471701 RBMX2Q9Y388 322 aaKnown RBP-0.13□□□□□ -2.43
PRPF40A-207ENST00000471701 GMEB1Q9Y692 573 aa-0.13□□□□□ -2.43
PRPF40A-207ENST00000471701 BZW2Q9Y6E2 419 aaKnown RBP-0.13□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms