RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 SP6Q3SY56 376 aa15.49■□□□□ 0.07
PSPC1-203ENST00000471658 OR52B4Q8NGK2 314 aa15.49■□□□□ 0.07
PSPC1-203ENST00000471658 TCTEX1D2Q8WW35 142 aa15.49■□□□□ 0.07
PSPC1-203ENST00000471658 MALSU1Q96EH3 234 aa15.49■□□□□ 0.07
PSPC1-203ENST00000471658 PRR13Q9NZ81 148 aa15.49■□□□□ 0.07
PSPC1-203ENST00000471658 TEX13DA0A0J9YY54 714 aaPredicted RBP15.48■□□□□ 0.07
PSPC1-203ENST00000471658 A0A1W2PPI3 338 aa15.48■□□□□ 0.07
PSPC1-203ENST00000471658 PEX14O75381 377 aa15.48■□□□□ 0.07
PSPC1-203ENST00000471658 OR4E1P0C645 316 aa15.48■□□□□ 0.07
PSPC1-203ENST00000471658 DHODHQ02127 395 aa15.48■□□□□ 0.07
PSPC1-203ENST00000471658 FAM71F2Q6NXP2 309 aa15.48■□□□□ 0.07
PSPC1-203ENST00000471658 ZNF66Q6ZN08 573 aa15.48■□□□□ 0.07
PSPC1-203ENST00000471658 MOB3BQ86TA1 216 aa15.48■□□□□ 0.07
PSPC1-203ENST00000471658 CCDC71LQ8N9Z2 235 aa15.48■□□□□ 0.07
PSPC1-203ENST00000471658 DDB2Q92466 427 aa15.48■□□□□ 0.07
PSPC1-203ENST00000471658 TP53RKQ96S44 253 aa15.48■□□□□ 0.07
PSPC1-203ENST00000471658 HSD17B10Q99714 261 aaKnown RBP15.48■□□□□ 0.07
PSPC1-203ENST00000471658 SEC22CQ9BRL7 303 aa15.48■□□□□ 0.07
PSPC1-203ENST00000471658 MS4A7Q9GZW8 240 aaPredicted RBP15.48■□□□□ 0.07
PSPC1-203ENST00000471658 NAA60Q9H7X0 242 aa15.48■□□□□ 0.07
PSPC1-203ENST00000471658 MDFIC2A0A1B0GVS7 189 aa15.47■□□□□ 0.07
PSPC1-203ENST00000471658 TIMM23O14925 209 aa15.47■□□□□ 0.07
PSPC1-203ENST00000471658 F2RP25116 425 aa15.47■□□□□ 0.07
PSPC1-203ENST00000471658 MECP2P51608 486 aaKnown RBP15.47■□□□□ 0.07
PSPC1-203ENST00000471658 SLC9A3R2Q15599 337 aa15.47■□□□□ 0.07
PSPC1-203ENST00000471658 KCTD9Q7L273 389 aa15.47■□□□□ 0.07
PSPC1-203ENST00000471658 A0A0B4J293 547 aa15.46■□□□□ 0.07
PSPC1-203ENST00000471658 C3orf85A0A1B0GTC6 90 aa15.46■□□□□ 0.07
PSPC1-203ENST00000471658 VAMP1P23763 118 aa15.46■□□□□ 0.07
PSPC1-203ENST00000471658 CD24P25063 80 aa15.46■□□□□ 0.07
PSPC1-203ENST00000471658 S100GP29377 79 aa15.46■□□□□ 0.07
PSPC1-203ENST00000471658 THBS3P49746 956 aa15.46■□□□□ 0.07
PSPC1-203ENST00000471658 RAB13P51153 203 aa15.46■□□□□ 0.07
PSPC1-203ENST00000471658 TAS2R31P59538 309 aa15.46■□□□□ 0.07
PSPC1-203ENST00000471658 C4orf46Q504U0 113 aa15.46■□□□□ 0.07
PSPC1-203ENST00000471658 TMEM128Q5BJH2 165 aa15.46■□□□□ 0.07
PSPC1-203ENST00000471658 SGPP2Q8IWX5 399 aa15.46■□□□□ 0.07
PSPC1-203ENST00000471658 ALX4Q9H161 411 aaPredicted RBP15.46■□□□□ 0.07
PSPC1-203ENST00000471658 H0YJW9 148 aa15.46■□□□□ 0.06
PSPC1-203ENST00000471658 RAMP3O60896 148 aa15.46■□□□□ 0.06
PSPC1-203ENST00000471658 FCGR3BO75015 233 aa15.46■□□□□ 0.06
PSPC1-203ENST00000471658 OR5AC1P0C628 307 aa15.46■□□□□ 0.06
PSPC1-203ENST00000471658 SRP14P37108 136 aaKnown RBP15.46■□□□□ 0.06
PSPC1-203ENST00000471658 FBLN7Q53RD9 439 aa15.46■□□□□ 0.06
PSPC1-203ENST00000471658 MINDY2Q8NBR6 621 aa15.46■□□□□ 0.06
PSPC1-203ENST00000471658 CFHR4Q92496 578 aa15.46■□□□□ 0.06
PSPC1-203ENST00000471658 FAM96BQ9Y3D0 163 aa15.46■□□□□ 0.06
PSPC1-203ENST00000471658 SONP18583 2426 aaKnown RBP15.45■□□□□ 0.06
PSPC1-203ENST00000471658 C9orf170A2RU37 121 aa15.45■□□□□ 0.06
PSPC1-203ENST00000471658 SFT2D2O95562 160 aa15.45■□□□□ 0.06
PSPC1-203ENST00000471658 RAG2P55895 527 aa15.45■□□□□ 0.06
PSPC1-203ENST00000471658 DEFB112Q30KQ8 113 aa15.45■□□□□ 0.06
PSPC1-203ENST00000471658 ZNF585BQ52M93 769 aa15.45■□□□□ 0.06
PSPC1-203ENST00000471658 SPAG16Q8N0X2 631 aa15.45■□□□□ 0.06
PSPC1-203ENST00000471658 OR8H3Q8N146 312 aa15.45■□□□□ 0.06
PSPC1-203ENST00000471658 OR5AN1Q8NGI8 311 aa15.45■□□□□ 0.06
PSPC1-203ENST00000471658 CASTOR1Q8WTX7 329 aa15.45■□□□□ 0.06
PSPC1-203ENST00000471658 OOSP1A8MZH6 123 aa15.44■□□□□ 0.06
PSPC1-203ENST00000471658 BPIFB3P59826 476 aa15.44■□□□□ 0.06
PSPC1-203ENST00000471658 UBE2MP61081 183 aaKnown RBP15.44■□□□□ 0.06
PSPC1-203ENST00000471658 CATR1Q13166 79 aa15.44■□□□□ 0.06
PSPC1-203ENST00000471658 DHRS2Q13268 280 aa15.44■□□□□ 0.06
PSPC1-203ENST00000471658 GLYATL2Q8WU03 294 aa15.44■□□□□ 0.06
PSPC1-203ENST00000471658 ADTRPQ96IZ2 230 aa15.44■□□□□ 0.06
PSPC1-203ENST00000471658 MEGF9Q9H1U4 602 aa15.44■□□□□ 0.06
PSPC1-203ENST00000471658 SLC35D1Q9NTN3 355 aa15.44■□□□□ 0.06
PSPC1-203ENST00000471658 ZFHX3Q15911 3703 aa15.43■□□□□ 0.06
PSPC1-203ENST00000471658 RNF212BA8MTL3 300 aa15.43■□□□□ 0.06
PSPC1-203ENST00000471658 TXNL1O43396 289 aa15.43■□□□□ 0.06
PSPC1-203ENST00000471658 DHFRP00374 187 aa15.43■□□□□ 0.06
PSPC1-203ENST00000471658 HLA-AP01891 365 aaKnown RBP15.43■□□□□ 0.06
PSPC1-203ENST00000471658 IGKV1-16P04430 117 aa15.43■□□□□ 0.06
PSPC1-203ENST00000471658 IL5P05113 134 aa15.43■□□□□ 0.06
PSPC1-203ENST00000471658 TMEM187Q14656 261 aa15.43■□□□□ 0.06
PSPC1-203ENST00000471658 ANKRD55Q3KP44 614 aa15.43■□□□□ 0.06
PSPC1-203ENST00000471658 CCDC144NLQ6NUI1 221 aa15.43■□□□□ 0.06
PSPC1-203ENST00000471658 C9orf139Q6ZV77 190 aa15.43■□□□□ 0.06
PSPC1-203ENST00000471658 LYG2Q86SG7 212 aa15.43■□□□□ 0.06
PSPC1-203ENST00000471658 GALNT14Q96FL9 552 aa15.43■□□□□ 0.06
PSPC1-203ENST00000471658 RITA1Q96K30 269 aa15.43■□□□□ 0.06
PSPC1-203ENST00000471658 ZNF48Q96MX3 618 aaPredicted RBP15.43■□□□□ 0.06
PSPC1-203ENST00000471658 TMEM160Q9NX00 188 aa15.43■□□□□ 0.06
PSPC1-203ENST00000471658 KCNIP3Q9Y2W7 256 aa15.43■□□□□ 0.06
PSPC1-203ENST00000471658 PRELID3BQ9Y3B1 194 aa15.43■□□□□ 0.06
PSPC1-203ENST00000471658 H0Y980 276 aa15.43■□□□□ 0.06
PSPC1-203ENST00000471658 H7C2Y5 167 aa15.43■□□□□ 0.06
PSPC1-203ENST00000471658 LPAR6P43657 344 aa15.43■□□□□ 0.06
PSPC1-203ENST00000471658 TATDN3Q17R31 274 aa15.43■□□□□ 0.06
PSPC1-203ENST00000471658 LIN54Q6MZP7 749 aa15.43■□□□□ 0.06
PSPC1-203ENST00000471658 LHFPL5Q8TAF8 219 aa15.43■□□□□ 0.06
PSPC1-203ENST00000471658 LIN7CQ9NUP9 197 aaKnown RBP15.43■□□□□ 0.06
PSPC1-203ENST00000471658 ALG5Q9Y673 324 aa15.43■□□□□ 0.06
PSPC1-203ENST00000471658 A0A0A6YYJ9 748 aa15.42■□□□□ 0.06
PSPC1-203ENST00000471658 INAFM1C9JVW0 142 aa15.42■□□□□ 0.06
PSPC1-203ENST00000471658 IFNA2P01563 188 aa15.42■□□□□ 0.06
PSPC1-203ENST00000471658 IGKV1-39P01597 117 aa15.42■□□□□ 0.06
PSPC1-203ENST00000471658 IGKV1D-39P04432 117 aa15.42■□□□□ 0.06
PSPC1-203ENST00000471658 FBP1P09467 338 aa15.42■□□□□ 0.06
PSPC1-203ENST00000471658 Q6ZNX1 250 aa15.42■□□□□ 0.06
PSPC1-203ENST00000471658 TMEM222Q9H0R3 208 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms