RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 CA5AP35218 305 aa-0.23□□□□□ -2.45
COMMD3-209ENST00000471350 PEX19P40855 299 aa-0.23□□□□□ -2.45
COMMD3-209ENST00000471350 ETV1P50549 477 aa-0.23□□□□□ -2.45
COMMD3-209ENST00000471350 FXYD7P58549 80 aa-0.23□□□□□ -2.45
COMMD3-209ENST00000471350 DYNLL1P63167 89 aaKnown RBP-0.23□□□□□ -2.45
COMMD3-209ENST00000471350 CIRBPQ14011 172 aaKnown RBP-0.23□□□□□ -2.45
COMMD3-209ENST00000471350 HIKESHIQ53FT3 197 aa-0.23□□□□□ -2.45
COMMD3-209ENST00000471350 TTC33Q6PID6 262 aaPredicted RBP-0.23□□□□□ -2.45
COMMD3-209ENST00000471350 SSX6Q7RTT6 188 aa-0.23□□□□□ -2.45
COMMD3-209ENST00000471350 TMEM75Q8N9X5 138 aa-0.23□□□□□ -2.45
COMMD3-209ENST00000471350 OR13C8Q8NGS7 320 aa-0.23□□□□□ -2.45
COMMD3-209ENST00000471350 MAP1LC3CQ9BXW4 147 aa-0.23□□□□□ -2.45
COMMD3-209ENST00000471350 EIF5A2Q9GZV4 153 aaKnown RBP-0.23□□□□□ -2.45
COMMD3-209ENST00000471350 TMBIM4Q9HC24 238 aa-0.23□□□□□ -2.45
COMMD3-209ENST00000471350 SNX10Q9Y5X0 201 aa-0.23□□□□□ -2.45
COMMD3-209ENST00000471350 MYO5BQ9ULV0 1848 aa-0.23□□□□□ -2.45
COMMD3-209ENST00000471350 RAB3GAP2Q9H2M9 1393 aa-0.23□□□□□ -2.45
COMMD3-209ENST00000471350 SETD5Q9C0A6 1442 aa-0.23□□□□□ -2.45
COMMD3-209ENST00000471350 NUMA1Q14980 2115 aa-0.23□□□□□ -2.45
COMMD3-209ENST00000471350 TRAV7A0A075B6U4 112 aa-0.24□□□□□ -2.45
COMMD3-209ENST00000471350 LOC110117498A0A087WWA1 95 aa-0.24□□□□□ -2.45
COMMD3-209ENST00000471350 A0A1B0GTQ1 180 aa-0.24□□□□□ -2.45
COMMD3-209ENST00000471350 POLR3GO15318 223 aaPredicted RBP-0.24□□□□□ -2.45
COMMD3-209ENST00000471350 MBP02144 154 aa-0.24□□□□□ -2.45
COMMD3-209ENST00000471350 CA7P43166 264 aa-0.24□□□□□ -2.45
COMMD3-209ENST00000471350 AKR1C1Q04828 323 aa-0.24□□□□□ -2.45
COMMD3-209ENST00000471350 USF2Q15853 346 aaPredicted RBP-0.24□□□□□ -2.45
COMMD3-209ENST00000471350 NDUFA5Q16718 116 aa-0.24□□□□□ -2.45
COMMD3-209ENST00000471350 TMCO2Q7Z6W1 182 aaPredicted RBP-0.24□□□□□ -2.45
COMMD3-209ENST00000471350 PLCZ1Q86YW0 608 aa-0.24□□□□□ -2.45
COMMD3-209ENST00000471350 NATD1Q8N6N6 113 aa-0.24□□□□□ -2.45
COMMD3-209ENST00000471350 DAND5Q8N907 189 aa-0.24□□□□□ -2.45
COMMD3-209ENST00000471350 OR8B3Q8NGG8 313 aa-0.24□□□□□ -2.45
COMMD3-209ENST00000471350 ZNF675Q8TD23 568 aa-0.24□□□□□ -2.45
COMMD3-209ENST00000471350 IFT81Q8WYA0 676 aa-0.24□□□□□ -2.45
COMMD3-209ENST00000471350 AQP3Q92482 292 aa-0.24□□□□□ -2.45
COMMD3-209ENST00000471350 MRAP2Q96G30 205 aa-0.24□□□□□ -2.45
COMMD3-209ENST00000471350 IMMP2LQ96T52 175 aa-0.24□□□□□ -2.45
COMMD3-209ENST00000471350 CHST6Q9GZX3 395 aa-0.24□□□□□ -2.45
COMMD3-209ENST00000471350 COMMD9Q9P000 198 aa-0.24□□□□□ -2.45
COMMD3-209ENST00000471350 ZFP30Q9Y2G7 519 aa-0.24□□□□□ -2.45
COMMD3-209ENST00000471350 FLT4P35916 1363 aa-0.24□□□□□ -2.45
COMMD3-209ENST00000471350 ZNF462Q96JM2 2506 aa-0.24□□□□□ -2.45
COMMD3-209ENST00000471350 SCN9AQ15858 1988 aa-0.25□□□□□ -2.45
COMMD3-209ENST00000471350 OR51F1A6NGY5 319 aa-0.25□□□□□ -2.45
COMMD3-209ENST00000471350 EFCAB9A8MZ26 197 aa-0.25□□□□□ -2.45
COMMD3-209ENST00000471350 hCG_2039718K7EN88 272 aa-0.25□□□□□ -2.45
COMMD3-209ENST00000471350 LGALS1P09382 135 aaKnown RBP-0.25□□□□□ -2.45
COMMD3-209ENST00000471350 KRTAP2-3P0C7H8 128 aa-0.25□□□□□ -2.45
COMMD3-209ENST00000471350 STAG3L3P0CL85 134 aa-0.25□□□□□ -2.45
COMMD3-209ENST00000471350 BGNP21810 368 aa-0.25□□□□□ -2.45
COMMD3-209ENST00000471350 VSNL1P62760 191 aa-0.25□□□□□ -2.45
COMMD3-209ENST00000471350 SPATA12Q7Z6I5 190 aa-0.25□□□□□ -2.45
COMMD3-209ENST00000471350 ASB13Q8WXK3 278 aa-0.25□□□□□ -2.45
COMMD3-209ENST00000471350 KIAA1143Q96AT1 154 aaPredicted RBP-0.25□□□□□ -2.45
COMMD3-209ENST00000471350 PPWD1Q96BP3 646 aaKnown RBP-0.25□□□□□ -2.45
COMMD3-209ENST00000471350 TAMM41Q96BW9 452 aa-0.25□□□□□ -2.45
COMMD3-209ENST00000471350 TMEM70Q9BUB7 260 aa-0.25□□□□□ -2.45
COMMD3-209ENST00000471350 HINT2Q9BX68 163 aa-0.25□□□□□ -2.45
COMMD3-209ENST00000471350 KRTAP2-4Q9BYR9 128 aa-0.25□□□□□ -2.45
COMMD3-209ENST00000471350 KRTAP2-1Q9BYU5 128 aa-0.25□□□□□ -2.45
COMMD3-209ENST00000471350 YIPF3Q9GZM5 350 aa-0.25□□□□□ -2.45
COMMD3-209ENST00000471350 GAL3ST2Q9H3Q3 398 aa-0.25□□□□□ -2.45
COMMD3-209ENST00000471350 POLR3HQ9Y535 204 aaPredicted RBP-0.25□□□□□ -2.45
COMMD3-209ENST00000471350 SCAF11Q99590 1463 aaKnown RBP-0.25□□□□□ -2.45
COMMD3-209ENST00000471350 MYH11P35749 1972 aa-0.26□□□□□ -2.45
COMMD3-209ENST00000471350 NUP160Q12769 1436 aa-0.26□□□□□ -2.45
COMMD3-209ENST00000471350 NSD2O96028 1365 aa-0.26□□□□□ -2.45
COMMD3-209ENST00000471350 A0A1W2PPV4 95 aa-0.26□□□□□ -2.45
COMMD3-209ENST00000471350 IBA57-AS1B1ANH7 110 aa-0.26□□□□□ -2.45
COMMD3-209ENST00000471350 CDIPTO14735 213 aa-0.26□□□□□ -2.45
COMMD3-209ENST00000471350 OR2T1O43869 369 aa-0.26□□□□□ -2.45
COMMD3-209ENST00000471350 SHOX2O60902 331 aaPredicted RBP-0.26□□□□□ -2.45
COMMD3-209ENST00000471350 SHBGP04278 402 aa-0.26□□□□□ -2.45
COMMD3-209ENST00000471350 CCNOP22674 350 aa-0.26□□□□□ -2.45
COMMD3-209ENST00000471350 TUBG1P23258 451 aa-0.26□□□□□ -2.45
COMMD3-209ENST00000471350 HSPA9P38646 679 aaKnown RBP-0.26□□□□□ -2.45
COMMD3-209ENST00000471350 DAPP51397 102 aa-0.26□□□□□ -2.45
COMMD3-209ENST00000471350 LINC00313P59037 77 aa-0.26□□□□□ -2.45
COMMD3-209ENST00000471350 ASCL4Q6XD76 172 aa-0.26□□□□□ -2.45
COMMD3-209ENST00000471350 SYS1Q8N2H4 156 aa-0.26□□□□□ -2.45
COMMD3-209ENST00000471350 RPP25LQ8N5L8 163 aaKnown RBP-0.26□□□□□ -2.45
COMMD3-209ENST00000471350 C9orf163Q8N9P6 203 aa-0.26□□□□□ -2.45
COMMD3-209ENST00000471350 LGALS14Q8TCE9 139 aa-0.26□□□□□ -2.45
COMMD3-209ENST00000471350 TESCQ96BS2 214 aa-0.26□□□□□ -2.45
COMMD3-209ENST00000471350 CPNE2Q96FN4 548 aaPredicted RBP-0.26□□□□□ -2.45
COMMD3-209ENST00000471350 ACY3Q96HD9 319 aa-0.26□□□□□ -2.45
COMMD3-209ENST00000471350 TUBG2Q9NRH3 451 aa-0.26□□□□□ -2.45
COMMD3-209ENST00000471350 UBQLN4Q9NRR5 601 aa-0.26□□□□□ -2.45
COMMD3-209ENST00000471350 KLK9Q9UKQ9 250 aa-0.26□□□□□ -2.45
COMMD3-209ENST00000471350 IGSF10Q6WRI0 2623 aa-0.26□□□□□ -2.45
COMMD3-209ENST00000471350 SMARCA4P51532 1647 aa-0.27□□□□□ -2.45
COMMD3-209ENST00000471350 TONSLQ96HA7 1378 aa-0.27□□□□□ -2.45
COMMD3-209ENST00000471350 FUOMA2VDF0 154 aa-0.27□□□□□ -2.45
COMMD3-209ENST00000471350 TMEM212A6NML5 194 aa-0.27□□□□□ -2.45
COMMD3-209ENST00000471350 C21orf140B9A014 251 aa-0.27□□□□□ -2.45
COMMD3-209ENST00000471350 H0YC42 278 aa-0.27□□□□□ -2.45
COMMD3-209ENST00000471350 H3BT86 120 aa-0.27□□□□□ -2.45
COMMD3-209ENST00000471350 NCR3O14931 201 aa-0.27□□□□□ -2.45
COMMD3-209ENST00000471350 SC5DO75845 299 aa-0.27□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms