RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 TBL2Q9Y4P3 447 aaKnown RBP7.92□□□□□ -1.14
SF3A1-207ENST00000471342 C9orf170A2RU37 121 aa7.91□□□□□ -1.14
SF3A1-207ENST00000471342 M0R1X1 148 aa7.91□□□□□ -1.14
SF3A1-207ENST00000471342 TIMM23O14925 209 aa7.91□□□□□ -1.14
SF3A1-207ENST00000471342 RGS11O94810 467 aa7.91□□□□□ -1.14
SF3A1-207ENST00000471342 IFNA6P05013 189 aa7.91□□□□□ -1.14
SF3A1-207ENST00000471342 IL5P05113 134 aa7.91□□□□□ -1.14
SF3A1-207ENST00000471342 CD24P25063 80 aa7.91□□□□□ -1.14
SF3A1-207ENST00000471342 UCP1P25874 307 aa7.91□□□□□ -1.14
SF3A1-207ENST00000471342 CNTFRP26992 372 aa7.91□□□□□ -1.14
SF3A1-207ENST00000471342 PRRX1P54821 245 aa7.91□□□□□ -1.14
SF3A1-207ENST00000471342 PIGPP57054 158 aa7.91□□□□□ -1.14
SF3A1-207ENST00000471342 ZNF66Q6ZN08 573 aa7.91□□□□□ -1.14
SF3A1-207ENST00000471342 Q6ZRM9 215 aa7.91□□□□□ -1.14
SF3A1-207ENST00000471342 Q71RC1 249 aaPredicted RBP7.91□□□□□ -1.14
SF3A1-207ENST00000471342 LRTM2Q8N967 370 aa7.91□□□□□ -1.14
SF3A1-207ENST00000471342 ZBTB34Q8NCN2 500 aa7.91□□□□□ -1.14
SF3A1-207ENST00000471342 ZNF486Q96H40 463 aaPredicted RBP7.91□□□□□ -1.14
SF3A1-207ENST00000471342 DPAGT1Q9H3H5 408 aa7.91□□□□□ -1.14
SF3A1-207ENST00000471342 YAE1D1Q9NRH1 226 aa7.91□□□□□ -1.14
SF3A1-207ENST00000471342 SCP2D1Q9UJQ7 156 aa7.91□□□□□ -1.14
SF3A1-207ENST00000471342 NUBP2Q9Y5Y2 271 aa7.91□□□□□ -1.14
SF3A1-207ENST00000471342 TRAV6A0A075B6T7 132 aa7.9□□□□□ -1.14
SF3A1-207ENST00000471342 IGHV3-72A0A0B4J1Y9 119 aa7.9□□□□□ -1.14
SF3A1-207ENST00000471342 FAM240BA0A1B0GVZ2 78 aa7.9□□□□□ -1.14
SF3A1-207ENST00000471342 A0A1B0GW64 132 aa7.9□□□□□ -1.14
SF3A1-207ENST00000471342 hCG_1809904A0A1W2PP81 198 aa7.9□□□□□ -1.14
SF3A1-207ENST00000471342 A0A1W2PPE2 198 aa7.9□□□□□ -1.14
SF3A1-207ENST00000471342 A0A1W2PR64 198 aa7.9□□□□□ -1.14
SF3A1-207ENST00000471342 A0A1W2PRV1 198 aa7.9□□□□□ -1.14
SF3A1-207ENST00000471342 A6NDX4 124 aa7.9□□□□□ -1.14
SF3A1-207ENST00000471342 LEUTXA8MZ59 168 aa7.9□□□□□ -1.14
SF3A1-207ENST00000471342 INAFM1C9JVW0 142 aa7.9□□□□□ -1.14
SF3A1-207ENST00000471342 VENTXO95231 258 aa7.9□□□□□ -1.14
SF3A1-207ENST00000471342 SFT2D2O95562 160 aa7.9□□□□□ -1.14
SF3A1-207ENST00000471342 CDS2O95674 445 aa7.9□□□□□ -1.14
SF3A1-207ENST00000471342 IGKV1-5P01602 117 aa7.9□□□□□ -1.14
SF3A1-207ENST00000471342 H2AFB2P0C5Z0 115 aa7.9□□□□□ -1.14
SF3A1-207ENST00000471342 OR4E1P0C645 316 aa7.9□□□□□ -1.14
SF3A1-207ENST00000471342 EPHA1P21709 976 aa7.9□□□□□ -1.14
SF3A1-207ENST00000471342 FAUP35544 74 aaKnown RBP7.9□□□□□ -1.14
SF3A1-207ENST00000471342 GPR12P47775 334 aa7.9□□□□□ -1.14
SF3A1-207ENST00000471342 F2RL1P55085 397 aa7.9□□□□□ -1.14
SF3A1-207ENST00000471342 IL15RAQ13261 267 aa7.9□□□□□ -1.14
SF3A1-207ENST00000471342 SSX2Q16385 188 aa7.9□□□□□ -1.14
SF3A1-207ENST00000471342 TMEM177Q53S58 311 aa7.9□□□□□ -1.14
SF3A1-207ENST00000471342 CLEC9AQ6UXN8 241 aa7.9□□□□□ -1.14
SF3A1-207ENST00000471342 Q6YL49 198 aa7.9□□□□□ -1.14
SF3A1-207ENST00000471342 KCTD9Q7L273 389 aa7.9□□□□□ -1.14
SF3A1-207ENST00000471342 C22orf15Q8WYQ4 148 aa7.9□□□□□ -1.14
SF3A1-207ENST00000471342 TMEM56Q96MV1 263 aa7.9□□□□□ -1.14
SF3A1-207ENST00000471342 SEC22CQ9BRL7 303 aa7.9□□□□□ -1.14
SF3A1-207ENST00000471342 BEX2Q9BXY8 128 aa7.9□□□□□ -1.14
SF3A1-207ENST00000471342 NAA60Q9H7X0 242 aa7.9□□□□□ -1.14
SF3A1-207ENST00000471342 BEX1Q9HBH7 125 aa7.9□□□□□ -1.14
SF3A1-207ENST00000471342 RAB9BQ9NP90 201 aa7.9□□□□□ -1.14
SF3A1-207ENST00000471342 FAM212BQ9NTI7 297 aaPredicted RBP7.9□□□□□ -1.14
SF3A1-207ENST00000471342 KCNS2Q9ULS6 477 aa7.9□□□□□ -1.14
SF3A1-207ENST00000471342 HILPDAQ9Y5L2 63 aa7.9□□□□□ -1.14
SF3A1-207ENST00000471342 TMEM56-RWDD3S4R434 201 aa7.9□□□□□ -1.14
SF3A1-207ENST00000471342 NAV3Q8IVL0 2385 aa7.89□□□□□ -1.15
SF3A1-207ENST00000471342 A0A0A6YYJ9 748 aa7.89□□□□□ -1.15
SF3A1-207ENST00000471342 TEX13DA0A0J9YY54 714 aaPredicted RBP7.89□□□□□ -1.15
SF3A1-207ENST00000471342 CGB1A6NKQ9 187 aa7.89□□□□□ -1.15
SF3A1-207ENST00000471342 MPTX1A8MV57 137 aa7.89□□□□□ -1.15
SF3A1-207ENST00000471342 OOSP1A8MZH6 123 aa7.89□□□□□ -1.15
SF3A1-207ENST00000471342 PEX14O75381 377 aa7.89□□□□□ -1.15
SF3A1-207ENST00000471342 GAPDHP04406 335 aaKnown RBP7.89□□□□□ -1.15
SF3A1-207ENST00000471342 RLN1P04808 185 aa7.89□□□□□ -1.15
SF3A1-207ENST00000471342 OR5AC1P0C628 307 aa7.89□□□□□ -1.15
SF3A1-207ENST00000471342 CD1BP29016 333 aa7.89□□□□□ -1.15
SF3A1-207ENST00000471342 ECI1P42126 302 aa7.89□□□□□ -1.15
SF3A1-207ENST00000471342 IER3P46695 156 aa7.89□□□□□ -1.15
SF3A1-207ENST00000471342 RAB25P57735 213 aa7.89□□□□□ -1.15
SF3A1-207ENST00000471342 BPIFB3P59826 476 aa7.89□□□□□ -1.15
SF3A1-207ENST00000471342 UBE2MP61081 183 aaKnown RBP7.89□□□□□ -1.15
SF3A1-207ENST00000471342 HERV-K104P61576 105 aa7.89□□□□□ -1.15
SF3A1-207ENST00000471342 DHRS2Q13268 280 aa7.89□□□□□ -1.15
SF3A1-207ENST00000471342 POU2AF1Q16633 256 aa7.89□□□□□ -1.15
SF3A1-207ENST00000471342 RGS21Q2M5E4 152 aa7.89□□□□□ -1.15
SF3A1-207ENST00000471342 AARDQ4LEZ3 155 aa7.89□□□□□ -1.15
SF3A1-207ENST00000471342 TMEM128Q5BJH2 165 aa7.89□□□□□ -1.15
SF3A1-207ENST00000471342 GPR157Q5UAW9 335 aa7.89□□□□□ -1.15
SF3A1-207ENST00000471342 MZT2BQ6NZ67 158 aa7.89□□□□□ -1.15
SF3A1-207ENST00000471342 THNSL2Q86YJ6 484 aa7.89□□□□□ -1.15
SF3A1-207ENST00000471342 SELENOHQ8IZQ5 122 aaKnown RBP7.89□□□□□ -1.15
SF3A1-207ENST00000471342 OR8H3Q8N146 312 aa7.89□□□□□ -1.15
SF3A1-207ENST00000471342 OR10X1Q8NGY0 326 aa7.89□□□□□ -1.15
SF3A1-207ENST00000471342 NANPQ8TBE9 248 aa7.89□□□□□ -1.15
SF3A1-207ENST00000471342 MITD1Q8WV92 249 aa7.89□□□□□ -1.15
SF3A1-207ENST00000471342 SEC22AQ96IW7 307 aa7.89□□□□□ -1.15
SF3A1-207ENST00000471342 TEP1Q99973 2627 aaKnown RBP7.89□□□□□ -1.15
SF3A1-207ENST00000471342 TRAV3A0A0B4J244 114 aa7.88□□□□□ -1.15
SF3A1-207ENST00000471342 C3orf85A0A1B0GTC6 90 aa7.88□□□□□ -1.15
SF3A1-207ENST00000471342 E7EUB6 86 aa7.88□□□□□ -1.15
SF3A1-207ENST00000471342 INMT-MINDY4F8WBC2 141 aa7.88□□□□□ -1.15
SF3A1-207ENST00000471342 H0Y980 276 aa7.88□□□□□ -1.15
SF3A1-207ENST00000471342 TOR1AO14656 332 aa7.88□□□□□ -1.15
SF3A1-207ENST00000471342 RBFOX2O43251 390 aaKnown RBP eCLIP7.88□□□□□ -1.15
SF3A1-207ENST00000471342 CHST1O43916 411 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms