RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 CCNOP22674 350 aa3.82□□□□□ -1.8
CKS1B-204ENST00000471245 CTRLP40313 264 aa3.82□□□□□ -1.8
CKS1B-204ENST00000471245 CRATP43155 626 aa3.82□□□□□ -1.8
CKS1B-204ENST00000471245 CSNK1A1P48729 337 aa3.82□□□□□ -1.8
CKS1B-204ENST00000471245 RPL14P50914 215 aaKnown RBP3.82□□□□□ -1.8
CKS1B-204ENST00000471245 CRISP3P54108 245 aa3.82□□□□□ -1.8
CKS1B-204ENST00000471245 FGF12P61328 243 aa3.82□□□□□ -1.8
CKS1B-204ENST00000471245 COPZ1P61923 177 aa3.82□□□□□ -1.8
CKS1B-204ENST00000471245 GNA13Q14344 377 aa3.82□□□□□ -1.8
CKS1B-204ENST00000471245 MOGQ16653 247 aa3.82□□□□□ -1.8
CKS1B-204ENST00000471245 HIST3H3Q16695 136 aa3.82□□□□□ -1.8
CKS1B-204ENST00000471245 PAGE3Q5JUK9 113 aa3.82□□□□□ -1.8
CKS1B-204ENST00000471245 THEM4Q5T1C6 240 aa3.82□□□□□ -1.8
CKS1B-204ENST00000471245 SLC35D2Q76EJ3 337 aa3.82□□□□□ -1.8
CKS1B-204ENST00000471245 OR4K5Q8NGD3 323 aa3.82□□□□□ -1.8
CKS1B-204ENST00000471245 OR4D11Q8NGI4 311 aa3.82□□□□□ -1.8
CKS1B-204ENST00000471245 OR6N1Q8NGY5 312 aa3.82□□□□□ -1.8
CKS1B-204ENST00000471245 OR2G3Q8NGZ4 309 aa3.82□□□□□ -1.8
CKS1B-204ENST00000471245 GTF2H4Q92759 462 aa3.82□□□□□ -1.8
CKS1B-204ENST00000471245 SLC35B4Q969S0 331 aa3.82□□□□□ -1.8
CKS1B-204ENST00000471245 OSBPL10Q9BXB5 764 aa3.82□□□□□ -1.8
CKS1B-204ENST00000471245 ULBP2Q9BZM5 246 aa3.82□□□□□ -1.8
CKS1B-204ENST00000471245 BCL2L14Q9BZR8 327 aa3.82□□□□□ -1.8
CKS1B-204ENST00000471245 C12orf10Q9HB07 376 aa3.82□□□□□ -1.8
CKS1B-204ENST00000471245 TMEM106BQ9NUM4 274 aa3.82□□□□□ -1.8
CKS1B-204ENST00000471245 TAS2R5Q9NYW4 299 aa3.82□□□□□ -1.8
CKS1B-204ENST00000471245 SLC25A37Q9NYZ2 338 aa3.82□□□□□ -1.8
CKS1B-204ENST00000471245 GLTPQ9NZD2 209 aa3.82□□□□□ -1.8
CKS1B-204ENST00000471245 SHPKQ9UHJ6 478 aa3.82□□□□□ -1.8
CKS1B-204ENST00000471245 FBXL3Q9UKT7 428 aa3.82□□□□□ -1.8
CKS1B-204ENST00000471245 KPTNQ9Y664 436 aa3.82□□□□□ -1.8
CKS1B-204ENST00000471245 CEACAM18A8MTB9 384 aa3.81□□□□□ -1.8
CKS1B-204ENST00000471245 C3orf84H3BNL1 204 aa3.81□□□□□ -1.8
CKS1B-204ENST00000471245 OR2T1O43869 369 aa3.81□□□□□ -1.8
CKS1B-204ENST00000471245 KRT75O95678 551 aa3.81□□□□□ -1.8
CKS1B-204ENST00000471245 SNAP29O95721 258 aa3.81□□□□□ -1.8
CKS1B-204ENST00000471245 PGA4P0DJD7 388 aa3.81□□□□□ -1.8
CKS1B-204ENST00000471245 PGA3P0DJD8 388 aa3.81□□□□□ -1.8
CKS1B-204ENST00000471245 NR2C1P13056 603 aa3.81□□□□□ -1.8
CKS1B-204ENST00000471245 NQO1P15559 274 aaKnown RBP3.81□□□□□ -1.8
CKS1B-204ENST00000471245 MGMTP16455 207 aa3.81□□□□□ -1.8
CKS1B-204ENST00000471245 CRISP2P16562 243 aa3.81□□□□□ -1.8
CKS1B-204ENST00000471245 ELK1P19419 428 aa3.81□□□□□ -1.8
CKS1B-204ENST00000471245 ERFP50548 548 aa3.81□□□□□ -1.8
CKS1B-204ENST00000471245 ZNF133P52736 654 aaPredicted RBP3.81□□□□□ -1.8
CKS1B-204ENST00000471245 PSG7Q13046 419 aa3.81□□□□□ -1.8
CKS1B-204ENST00000471245 PMS2P3Q13401 168 aa3.81□□□□□ -1.8
CKS1B-204ENST00000471245 TRAM2Q15035 370 aa3.81□□□□□ -1.8
CKS1B-204ENST00000471245 RGNQ15493 299 aa3.81□□□□□ -1.8
CKS1B-204ENST00000471245 OR1Q1Q15612 314 aa3.81□□□□□ -1.8
CKS1B-204ENST00000471245 PSG3Q16557 428 aa3.81□□□□□ -1.8
CKS1B-204ENST00000471245 DEFB121Q5J5C9 76 aa3.81□□□□□ -1.8
CKS1B-204ENST00000471245 DHRS4L2Q6PKH6 230 aa3.81□□□□□ -1.8
CKS1B-204ENST00000471245 ACP7Q6ZNF0 438 aa3.81□□□□□ -1.8
CKS1B-204ENST00000471245 Q6ZR03 302 aa3.81□□□□□ -1.8
CKS1B-204ENST00000471245 LINC00336Q6ZUF6 198 aa3.81□□□□□ -1.8
CKS1B-204ENST00000471245 RBM45Q8IUH3 476 aaKnown RBP3.81□□□□□ -1.8
CKS1B-204ENST00000471245 FUNDC1Q8IVP5 155 aa3.81□□□□□ -1.8
CKS1B-204ENST00000471245 ZNF283Q8N7M2 679 aa3.81□□□□□ -1.8
CKS1B-204ENST00000471245 NPBQ8NG41 125 aa3.81□□□□□ -1.8
CKS1B-204ENST00000471245 GPR32P1Q8NGA4 272 aa3.81□□□□□ -1.8
CKS1B-204ENST00000471245 OR5J2Q8NH18 312 aa3.81□□□□□ -1.8
CKS1B-204ENST00000471245 OR6X1Q8NH79 312 aa3.81□□□□□ -1.8
CKS1B-204ENST00000471245 SLC25A40Q8TBP6 338 aa3.81□□□□□ -1.8
CKS1B-204ENST00000471245 B9D2Q9BPU9 175 aa3.81□□□□□ -1.8
CKS1B-204ENST00000471245 OR2J1Q9GZK6 312 aa3.81□□□□□ -1.8
CKS1B-204ENST00000471245 NANOGQ9H9S0 305 aa3.81□□□□□ -1.8
CKS1B-204ENST00000471245 ZC4H2Q9NQZ6 224 aa3.81□□□□□ -1.8
CKS1B-204ENST00000471245 CALML5Q9NZT1 146 aa3.81□□□□□ -1.8
CKS1B-204ENST00000471245 ING4Q9UNL4 249 aa3.81□□□□□ -1.8
CKS1B-204ENST00000471245 RCL1Q9Y2P8 373 aaKnown RBP3.81□□□□□ -1.8
CKS1B-204ENST00000471245 RBMX2Q9Y388 322 aaKnown RBP3.81□□□□□ -1.8
CKS1B-204ENST00000471245 STAB2Q8WWQ8 2551 aa3.81□□□□□ -1.8
CKS1B-204ENST00000471245 STARD9Q9P2P6 4700 aa3.8□□□□□ -1.8
CKS1B-204ENST00000471245 DSCAML1Q8TD84 2053 aa3.8□□□□□ -1.8
CKS1B-204ENST00000471245 PCLOQ9Y6V0 5065 aa3.8□□□□□ -1.8
CKS1B-204ENST00000471245 TRAV39A0A0B4J263 110 aa3.8□□□□□ -1.8
CKS1B-204ENST00000471245 IGKV1D-13A0A0B4J2D9 117 aa3.8□□□□□ -1.8
CKS1B-204ENST00000471245 CENPVL3A0A0U1RRI6 287 aa3.8□□□□□ -1.8
CKS1B-204ENST00000471245 A0A1B0GVI7 797 aa3.8□□□□□ -1.8
CKS1B-204ENST00000471245 WI2-2373I1.2A0A1W2PRP0 233 aa3.8□□□□□ -1.8
CKS1B-204ENST00000471245 BIRC5O15392 142 aa3.8□□□□□ -1.8
CKS1B-204ENST00000471245 GIPP09681 153 aaPredicted RBP3.8□□□□□ -1.8
CKS1B-204ENST00000471245 ASAH2BP0C7U1 165 aa3.8□□□□□ -1.8
CKS1B-204ENST00000471245 CT45A6P0DMU7 189 aa3.8□□□□□ -1.8
CKS1B-204ENST00000471245 CT45A5P0DMU8 189 aa3.8□□□□□ -1.8
CKS1B-204ENST00000471245 CT45A7P0DMV0 189 aa3.8□□□□□ -1.8
CKS1B-204ENST00000471245 IGHV3-43DP0DP04 118 aa3.8□□□□□ -1.8
CKS1B-204ENST00000471245 IGKV1-13P0DP09 117 aa3.8□□□□□ -1.8
CKS1B-204ENST00000471245 ZNF32P17041 273 aa3.8□□□□□ -1.8
CKS1B-204ENST00000471245 PMCHP20382 165 aa3.8□□□□□ -1.8
CKS1B-204ENST00000471245 VSNL1P62760 191 aa3.8□□□□□ -1.8
CKS1B-204ENST00000471245 TNFAIP6P98066 277 aaPredicted RBP3.8□□□□□ -1.8
CKS1B-204ENST00000471245 PSG4Q00888 419 aa3.8□□□□□ -1.8
CKS1B-204ENST00000471245 FMODQ06828 376 aa3.8□□□□□ -1.8
CKS1B-204ENST00000471245 SGCAQ16586 387 aa3.8□□□□□ -1.8
CKS1B-204ENST00000471245 TBC1D28Q2M2D7 210 aa3.8□□□□□ -1.8
CKS1B-204ENST00000471245 TTMPQ5BVD1 217 aa3.8□□□□□ -1.8
CKS1B-204ENST00000471245 TNFAIP8L3Q5GJ75 292 aa3.8□□□□□ -1.8
CKS1B-204ENST00000471245 CT45A1Q5HYN5 189 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms