RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 MED28Q9H204 178 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 ZNF286AQ9HBT8 521 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 TAS2R3Q9NYW6 316 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 VSIG4Q9Y279 399 aa3.85□□□□□ -1.79
SF3B1-208ENST00000470268 UBE2J1Q9Y385 318 aaPredicted RBP3.85□□□□□ -1.79
SF3B1-208ENST00000470268 MED13LQ71F56 2210 aa3.84□□□□□ -1.79
SF3B1-208ENST00000470268 ARHGAP32A7KAX9 2087 aa3.84□□□□□ -1.79
SF3B1-208ENST00000470268 A0A1W2PPE3 182 aa3.84□□□□□ -1.79
SF3B1-208ENST00000470268 B4DSR2 109 aa3.84□□□□□ -1.79
SF3B1-208ENST00000470268 BET1O15155 118 aa3.84□□□□□ -1.79
SF3B1-208ENST00000470268 SLC31A2O15432 143 aa3.84□□□□□ -1.79
SF3B1-208ENST00000470268 TSC22D2O75157 780 aa3.84□□□□□ -1.79
SF3B1-208ENST00000470268 TNFRSF6BO95407 300 aa3.84□□□□□ -1.79
SF3B1-208ENST00000470268 DHFRP00374 187 aa3.84□□□□□ -1.79
SF3B1-208ENST00000470268 LIPFP07098 398 aa3.84□□□□□ -1.79
SF3B1-208ENST00000470268 CSF1P09603 554 aa3.84□□□□□ -1.79
SF3B1-208ENST00000470268 OR5H8P0DN80 308 aa3.84□□□□□ -1.79
SF3B1-208ENST00000470268 IGHV1-8P0DP01 117 aa3.84□□□□□ -1.79
SF3B1-208ENST00000470268 M6PRP20645 277 aa3.84□□□□□ -1.79
SF3B1-208ENST00000470268 PPP1CCP36873 323 aaKnown RBP3.84□□□□□ -1.79
SF3B1-208ENST00000470268 TAS2R19P59542 299 aa3.84□□□□□ -1.79
SF3B1-208ENST00000470268 B2MP61769 119 aa3.84□□□□□ -1.79
SF3B1-208ENST00000470268 PAX8Q06710 450 aa3.84□□□□□ -1.79
SF3B1-208ENST00000470268 BAMBIQ13145 260 aa3.84□□□□□ -1.79
SF3B1-208ENST00000470268 FHL3Q13643 280 aa3.84□□□□□ -1.79
SF3B1-208ENST00000470268 CDK10Q15131 360 aa3.84□□□□□ -1.79
SF3B1-208ENST00000470268 CHRFAM7AQ494W8 412 aa3.84□□□□□ -1.79
SF3B1-208ENST00000470268 VAX1Q5SQQ9 334 aa3.84□□□□□ -1.79
SF3B1-208ENST00000470268 LDLRAD2Q5SZI1 272 aa3.84□□□□□ -1.79
SF3B1-208ENST00000470268 AADACL3Q5VUY0 350 aa3.84□□□□□ -1.79
SF3B1-208ENST00000470268 HCP5Q6MZN7 132 aa3.84□□□□□ -1.79
SF3B1-208ENST00000470268 ZNF600Q6ZNG1 722 aa3.84□□□□□ -1.79
SF3B1-208ENST00000470268 ADAD2Q8NCV1 583 aaKnown RBP3.84□□□□□ -1.79
SF3B1-208ENST00000470268 OR10V1Q8NGI7 309 aa3.84□□□□□ -1.79
SF3B1-208ENST00000470268 OR4A4PQ8NGN8 299 aa3.84□□□□□ -1.79
SF3B1-208ENST00000470268 GALMQ96C23 342 aa3.84□□□□□ -1.79
SF3B1-208ENST00000470268 SIRPDQ9H106 197 aa3.84□□□□□ -1.79
SF3B1-208ENST00000470268 OR2S2Q9NQN1 319 aa3.84□□□□□ -1.79
SF3B1-208ENST00000470268 SIRT7Q9NRC8 400 aa3.84□□□□□ -1.79
SF3B1-208ENST00000470268 HIF1ANQ9NWT6 349 aa3.84□□□□□ -1.79
SF3B1-208ENST00000470268 IDI2-AS1Q9NZ38 188 aa3.84□□□□□ -1.79
SF3B1-208ENST00000470268 EHFQ9NZC4 300 aa3.84□□□□□ -1.79
SF3B1-208ENST00000470268 KCNIP1Q9NZI2 227 aa3.84□□□□□ -1.79
SF3B1-208ENST00000470268 ONECUT1Q9UBC0 465 aa3.84□□□□□ -1.79
SF3B1-208ENST00000470268 OPN4Q9UHM6 478 aa3.84□□□□□ -1.79
SF3B1-208ENST00000470268 ZNF107Q9UII5 783 aaPredicted RBP3.84□□□□□ -1.79
SF3B1-208ENST00000470268 INSIG2Q9Y5U4 225 aa3.84□□□□□ -1.79
SF3B1-208ENST00000470268 CCDC168Q8NDH2 2452 aa3.84□□□□□ -1.79
SF3B1-208ENST00000470268 ABCA2Q9BZC7 2435 aa3.84□□□□□ -1.79
SF3B1-208ENST00000470268 SETXQ7Z333 2677 aaKnown RBP3.84□□□□□ -1.79
SF3B1-208ENST00000470268 NOTCH2Q04721 2471 aa3.84□□□□□ -1.8
SF3B1-208ENST00000470268 IGKV1D-13A0A0B4J2D9 117 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 OR5H14A6NHG9 310 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 CCSO14618 274 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 SPINT2O43291 252 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 ENSAO43768 121 aaKnown RBP3.83□□□□□ -1.8
SF3B1-208ENST00000470268 PROP1O75360 226 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 TSPAN9O75954 239 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 TGFAP01135 160 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 IGLV2-14P01704 120 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 TRAPPC2P0DI81 140 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 TRAPPC2BP0DI82 140 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 SULT1A3P0DMM9 295 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 SULT1A4P0DMN0 295 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 IGKV1-13P0DP09 117 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 NFYBP25208 207 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 FCGR2CP31995 323 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 CEACAM6P40199 344 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 DVL1P1P54792 670 aaPredicted RBP3.83□□□□□ -1.8
SF3B1-208ENST00000470268 H2BFSP57053 126 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 TAS2R46P59540 309 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 AP3S2P59780 193 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 HTD2P86397 168 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 KLRD1Q13241 179 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 FOXE3Q13461 319 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 MORN2Q502X0 79 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 RNASE10Q5GAN6 216 aaKnown RBP3.83□□□□□ -1.8
SF3B1-208ENST00000470268 TRAT1Q6PIZ9 186 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 DHRS11Q6UWP2 260 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 GLDNQ6ZMI3 551 aaPredicted RBP3.83□□□□□ -1.8
SF3B1-208ENST00000470268 VMO1Q7Z5L0 202 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 LHFPL1Q86WI0 220 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 H1FOOQ8IZA3 346 aaPredicted RBP3.83□□□□□ -1.8
SF3B1-208ENST00000470268 TCTE3Q8IZS6 198 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 PNKDQ8N490 385 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 ZNF439Q8NDP4 499 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 OR5H2Q8NGV7 314 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 TMEM186Q96B77 213 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 RBMXL1Q96E39 390 aaKnown RBP3.83□□□□□ -1.8
SF3B1-208ENST00000470268 TBX15Q96SF7 602 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 SMR3AQ99954 134 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 C7orf50Q9BRJ6 194 aaKnown RBP3.83□□□□□ -1.8
SF3B1-208ENST00000470268 AIFM2Q9BRQ8 373 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 AGMATQ9BSE5 352 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 ZNF2Q9BSG1 426 aaPredicted RBP3.83□□□□□ -1.8
SF3B1-208ENST00000470268 TOLLIPQ9H0E2 274 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 GAL3ST2Q9H3Q3 398 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 NECAP2Q9NVZ3 263 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 RDH8Q9NYR8 311 aa3.83□□□□□ -1.8
SF3B1-208ENST00000470268 TAS2R8Q9NYW2 309 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms