RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 EAF1Q96JC9 268 aaPredicted RBP10.12□□□□□ -0.79
SPTLC1-204ENST00000469778 SCGB3A2Q96PL1 93 aa10.12□□□□□ -0.79
SPTLC1-204ENST00000469778 AIFM2Q9BRQ8 373 aa10.12□□□□□ -0.79
SPTLC1-204ENST00000469778 MRPL20Q9BYC9 149 aaKnown RBP10.12□□□□□ -0.79
SPTLC1-204ENST00000469778 SLC5A7Q9GZV3 580 aa10.12□□□□□ -0.79
SPTLC1-204ENST00000469778 SCP2D1Q9UJQ7 156 aa10.12□□□□□ -0.79
SPTLC1-204ENST00000469778 H0YJW9 148 aa10.11□□□□□ -0.79
SPTLC1-204ENST00000469778 TSPAN9O75954 239 aa10.11□□□□□ -0.79
SPTLC1-204ENST00000469778 HKR1P10072 659 aa10.11□□□□□ -0.79
SPTLC1-204ENST00000469778 CD40LGP29965 261 aa10.11□□□□□ -0.79
SPTLC1-204ENST00000469778 DUTP33316 252 aaKnown RBP10.11□□□□□ -0.79
SPTLC1-204ENST00000469778 KIR2DS2P43631 304 aa10.11□□□□□ -0.79
SPTLC1-204ENST00000469778 LGALS7P47929 136 aa10.11□□□□□ -0.79
SPTLC1-204ENST00000469778 INPP1P49441 399 aa10.11□□□□□ -0.79
SPTLC1-204ENST00000469778 FOXL1Q12952 345 aa10.11□□□□□ -0.79
SPTLC1-204ENST00000469778 LHFPL1Q86WI0 220 aa10.11□□□□□ -0.79
SPTLC1-204ENST00000469778 Q8N6K4 173 aa10.11□□□□□ -0.79
SPTLC1-204ENST00000469778 OR4C13Q8NGP0 309 aa10.11□□□□□ -0.79
SPTLC1-204ENST00000469778 OR4F5Q8NH21 305 aa10.11□□□□□ -0.79
SPTLC1-204ENST00000469778 ZFAND1Q8TCF1 268 aa10.11□□□□□ -0.79
SPTLC1-204ENST00000469778 SECTM1Q8WVN6 248 aa10.11□□□□□ -0.79
SPTLC1-204ENST00000469778 CCDC32Q9BV29 185 aa10.11□□□□□ -0.79
SPTLC1-204ENST00000469778 PRSS22Q9GZN4 317 aa10.11□□□□□ -0.79
SPTLC1-204ENST00000469778 FAM212BQ9NTI7 297 aaPredicted RBP10.11□□□□□ -0.79
SPTLC1-204ENST00000469778 SLC2A8Q9NY64 477 aa10.11□□□□□ -0.79
SPTLC1-204ENST00000469778 IGKV1D-13A0A0B4J2D9 117 aa10.1□□□□□ -0.79
SPTLC1-204ENST00000469778 NAP1L6A6NFF2 107 aa10.1□□□□□ -0.79
SPTLC1-204ENST00000469778 H7C2Y5 167 aa10.1□□□□□ -0.79
SPTLC1-204ENST00000469778 GPR31O00270 319 aa10.1□□□□□ -0.79
SPTLC1-204ENST00000469778 RBFOX2O43251 390 aaKnown RBP eCLIP10.1□□□□□ -0.79
SPTLC1-204ENST00000469778 IGLV2-14P01704 120 aa10.1□□□□□ -0.79
SPTLC1-204ENST00000469778 AMY2AP04746 511 aa10.1□□□□□ -0.79
SPTLC1-204ENST00000469778 IGKV1-13P0DP09 117 aa10.1□□□□□ -0.79
SPTLC1-204ENST00000469778 PAX6P26367 422 aa10.1□□□□□ -0.79
SPTLC1-204ENST00000469778 GNRHRP30968 328 aa10.1□□□□□ -0.79
SPTLC1-204ENST00000469778 PPP5CP53041 499 aa10.1□□□□□ -0.79
SPTLC1-204ENST00000469778 CATR1Q13166 79 aa10.1□□□□□ -0.79
SPTLC1-204ENST00000469778 LY6EQ16553 131 aa10.1□□□□□ -0.79
SPTLC1-204ENST00000469778 RNASE12Q5GAN4 147 aaKnown RBP10.1□□□□□ -0.79
SPTLC1-204ENST00000469778 TRIQKQ629K1 86 aa10.1□□□□□ -0.79
SPTLC1-204ENST00000469778 CCBE1Q6UXH8 406 aaPredicted RBP10.1□□□□□ -0.79
SPTLC1-204ENST00000469778 ZNF383Q8NA42 475 aa10.1□□□□□ -0.79
SPTLC1-204ENST00000469778 POC5Q8NA72 575 aa10.1□□□□□ -0.79
SPTLC1-204ENST00000469778 NPBQ8NG41 125 aa10.1□□□□□ -0.79
SPTLC1-204ENST00000469778 TRIM63Q969Q1 353 aa10.1□□□□□ -0.79
SPTLC1-204ENST00000469778 FLYWCH2Q96CP2 140 aaKnown RBP10.1□□□□□ -0.79
SPTLC1-204ENST00000469778 DUX5Q96PT3 197 aa10.1□□□□□ -0.79
SPTLC1-204ENST00000469778 TSNAXQ99598 290 aaKnown RBP10.1□□□□□ -0.79
SPTLC1-204ENST00000469778 SLC25A33Q9BSK2 321 aa10.1□□□□□ -0.79
SPTLC1-204ENST00000469778 WDR12Q9GZL7 423 aaKnown RBP10.1□□□□□ -0.79
SPTLC1-204ENST00000469778 TINAGL1Q9GZM7 467 aaPredicted RBP10.1□□□□□ -0.79
SPTLC1-204ENST00000469778 C16orf95Q9H693 158 aa10.1□□□□□ -0.79
SPTLC1-204ENST00000469778 AKIP1Q9NQ31 210 aa10.1□□□□□ -0.79
SPTLC1-204ENST00000469778 CCL28Q9NRJ3 127 aa10.1□□□□□ -0.79
SPTLC1-204ENST00000469778 TNFRSF19Q9NS68 423 aa10.1□□□□□ -0.79
SPTLC1-204ENST00000469778 MOB4Q9Y3A3 225 aa10.1□□□□□ -0.79
SPTLC1-204ENST00000469778 MMP24Q9Y5R2 645 aa10.1□□□□□ -0.79
SPTLC1-204ENST00000469778 ATRQ13535 2644 aa10.1□□□□□ -0.79
SPTLC1-204ENST00000469778 TMEM89A2RUT3 159 aa10.09□□□□□ -0.79
SPTLC1-204ENST00000469778 CENPXA8MT69 81 aa10.09□□□□□ -0.79
SPTLC1-204ENST00000469778 M0QYG6 137 aa10.09□□□□□ -0.79
SPTLC1-204ENST00000469778 B3GALNT1O75752 331 aa10.09□□□□□ -0.79
SPTLC1-204ENST00000469778 SPDEFO95238 335 aa10.09□□□□□ -0.79
SPTLC1-204ENST00000469778 FXYD4P59646 89 aa10.09□□□□□ -0.79
SPTLC1-204ENST00000469778 EIF4EBP1Q13541 118 aaPredicted RBP10.09□□□□□ -0.79
SPTLC1-204ENST00000469778 KLF9Q13886 244 aaPredicted RBP10.09□□□□□ -0.79
SPTLC1-204ENST00000469778 AADACL3Q5VUY0 350 aa10.09□□□□□ -0.79
SPTLC1-204ENST00000469778 Q8N2B8 174 aa10.09□□□□□ -0.79
SPTLC1-204ENST00000469778 MFSD4AQ8N468 514 aa10.09□□□□□ -0.79
SPTLC1-204ENST00000469778 OSR1Q8TAX0 266 aaPredicted RBP10.09□□□□□ -0.79
SPTLC1-204ENST00000469778 DDB2Q92466 427 aa10.09□□□□□ -0.79
SPTLC1-204ENST00000469778 C7orf50Q9BRJ6 194 aaKnown RBP10.09□□□□□ -0.79
SPTLC1-204ENST00000469778 RSRP1Q9BUV0 290 aa10.09□□□□□ -0.79
SPTLC1-204ENST00000469778 BEX1Q9HBH7 125 aa10.09□□□□□ -0.79
SPTLC1-204ENST00000469778 SLC35D1Q9NTN3 355 aa10.09□□□□□ -0.79
SPTLC1-204ENST00000469778 IGHV3-72A0A0B4J1Y9 119 aa10.08□□□□□ -0.8
SPTLC1-204ENST00000469778 PGLYRP1O75594 196 aaPredicted RBP10.08□□□□□ -0.8
SPTLC1-204ENST00000469778 ZNF735P0CB33 412 aa10.08□□□□□ -0.8
SPTLC1-204ENST00000469778 CD24P25063 80 aa10.08□□□□□ -0.8
SPTLC1-204ENST00000469778 COMPP49747 757 aaPredicted RBP10.08□□□□□ -0.8
SPTLC1-204ENST00000469778 RND3P61587 244 aa10.08□□□□□ -0.8
SPTLC1-204ENST00000469778 HNF4GQ14541 408 aa10.08□□□□□ -0.8
SPTLC1-204ENST00000469778 ZNF846Q147U1 533 aa10.08□□□□□ -0.8
SPTLC1-204ENST00000469778 TMEM177Q53S58 311 aa10.08□□□□□ -0.8
SPTLC1-204ENST00000469778 KCTD9Q7L273 389 aa10.08□□□□□ -0.8
SPTLC1-204ENST00000469778 TMEM219Q86XT9 240 aa10.08□□□□□ -0.8
SPTLC1-204ENST00000469778 DRAXINQ8NBI3 349 aaPredicted RBP10.08□□□□□ -0.8
SPTLC1-204ENST00000469778 OR4C16Q8NGL9 310 aa10.08□□□□□ -0.8
SPTLC1-204ENST00000469778 OR4S2Q8NH73 311 aa10.08□□□□□ -0.8
SPTLC1-204ENST00000469778 OR2T6Q8NHC8 308 aa10.08□□□□□ -0.8
SPTLC1-204ENST00000469778 RASL11BQ9BPW5 248 aa10.08□□□□□ -0.8
SPTLC1-204ENST00000469778 SLC25A21Q9BQT8 299 aaPredicted RBP10.08□□□□□ -0.8
SPTLC1-204ENST00000469778 PLSCR3Q9NRY6 295 aa10.08□□□□□ -0.8
SPTLC1-204ENST00000469778 LIN7CQ9NUP9 197 aaKnown RBP10.08□□□□□ -0.8
SPTLC1-204ENST00000469778 KIAA1456Q9P272 454 aa10.08□□□□□ -0.8
SPTLC1-204ENST00000469778 PIGBOS1A0A0B4J2F0 54 aa10.07□□□□□ -0.8
SPTLC1-204ENST00000469778 NCBP2LA6PVI3 153 aaKnown RBP10.07□□□□□ -0.8
SPTLC1-204ENST00000469778 J3QRK9 145 aa10.07□□□□□ -0.8
SPTLC1-204ENST00000469778 NBR2O15453 112 aa10.07□□□□□ -0.8
SPTLC1-204ENST00000469778 CHST1O43916 411 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms