RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 SCTP09683 121 aa12.9□□□□□ -0.34
LIMS2-213ENST00000469300 LINC01560Q8TB33 94 aa12.9□□□□□ -0.34
LIMS2-213ENST00000469300 VKORC1Q9BQB6 163 aa12.9□□□□□ -0.34
LIMS2-213ENST00000469300 ASCL3Q9NQ33 180 aa12.9□□□□□ -0.34
LIMS2-213ENST00000469300 NAT8BQ9UHF3 227 aa12.9□□□□□ -0.34
LIMS2-213ENST00000469300 THADAQ6YHU6 1953 aa12.9□□□□□ -0.34
LIMS2-213ENST00000469300 FAM90A26D6RGX4 464 aa12.9□□□□□ -0.34
LIMS2-213ENST00000469300 ZNF738Q8NE65 137 aa12.9□□□□□ -0.34
LIMS2-213ENST00000469300 OR2T10Q8NGZ9 312 aa12.9□□□□□ -0.34
LIMS2-213ENST00000469300 OR1L1Q8NH94 360 aa12.9□□□□□ -0.34
LIMS2-213ENST00000469300 PQLC2LA1A4F0 135 aa12.9□□□□□ -0.35
LIMS2-213ENST00000469300 LMX1BO60663 402 aa12.9□□□□□ -0.35
LIMS2-213ENST00000469300 SELENOTP62341 195 aa12.9□□□□□ -0.35
LIMS2-213ENST00000469300 MRPL13Q9BYD1 178 aaKnown RBP12.9□□□□□ -0.35
LIMS2-213ENST00000469300 GSX1Q9H4S2 264 aaPredicted RBP12.9□□□□□ -0.35
LIMS2-213ENST00000469300 DOK5Q9P104 306 aa12.9□□□□□ -0.35
LIMS2-213ENST00000469300 MPDU1O75352 247 aa12.89□□□□□ -0.35
LIMS2-213ENST00000469300 REG1BP48304 166 aa12.89□□□□□ -0.35
LIMS2-213ENST00000469300 FAM90A1Q86YD7 464 aa12.89□□□□□ -0.35
LIMS2-213ENST00000469300 FNDC1Q4ZHG4 1894 aaPredicted RBP12.89□□□□□ -0.35
LIMS2-213ENST00000469300 CYB5R3P00387 301 aaPredicted RBP12.89□□□□□ -0.35
LIMS2-213ENST00000469300 ZNF345Q14585 488 aa12.89□□□□□ -0.35
LIMS2-213ENST00000469300 PCSK4Q6UW60 755 aa12.89□□□□□ -0.35
LIMS2-213ENST00000469300 C9orf106Q8NAJ2 232 aa12.89□□□□□ -0.35
LIMS2-213ENST00000469300 NYNRINQ9P2P1 1898 aaKnown RBP12.89□□□□□ -0.35
LIMS2-213ENST00000469300 RBFOX3A6NFN3 312 aa12.89□□□□□ -0.35
LIMS2-213ENST00000469300 FAM74A7A6NL05 159 aa12.89□□□□□ -0.35
LIMS2-213ENST00000469300 SEC11BP0C7V7 166 aa12.89□□□□□ -0.35
LIMS2-213ENST00000469300 UCP3P55916 312 aa12.89□□□□□ -0.35
LIMS2-213ENST00000469300 FAM74A3Q4VXF1 159 aa12.89□□□□□ -0.35
LIMS2-213ENST00000469300 FAM78BQ5VT40 261 aa12.89□□□□□ -0.35
LIMS2-213ENST00000469300 CHAC2Q8WUX2 184 aa12.89□□□□□ -0.35
LIMS2-213ENST00000469300 OR10C1Q96KK4 312 aa12.89□□□□□ -0.35
LIMS2-213ENST00000469300 REPIN1Q9BWE0 567 aaKnown RBP12.89□□□□□ -0.35
LIMS2-213ENST00000469300 IGHV2OR16-5A0A0B4J2B6 119 aa12.88□□□□□ -0.35
LIMS2-213ENST00000469300 A0A1W2PPE3 182 aa12.88□□□□□ -0.35
LIMS2-213ENST00000469300 MFSD2BA6NFX1 497 aa12.88□□□□□ -0.35
LIMS2-213ENST00000469300 RPL8P62917 257 aaKnown RBP12.88□□□□□ -0.35
LIMS2-213ENST00000469300 MYPOPQ86VE0 399 aaPredicted RBP12.88□□□□□ -0.35
LIMS2-213ENST00000469300 ARL6IP6Q8N6S5 226 aa12.88□□□□□ -0.35
LIMS2-213ENST00000469300 NRIP2Q9BQI9 281 aa12.88□□□□□ -0.35
LIMS2-213ENST00000469300 CLEC7AQ9BXN2 247 aa12.88□□□□□ -0.35
LIMS2-213ENST00000469300 TNFRSF19Q9NS68 423 aa12.88□□□□□ -0.35
LIMS2-213ENST00000469300 RAB24Q969Q5 203 aa12.88□□□□□ -0.35
LIMS2-213ENST00000469300 STARD4Q96DR4 205 aa12.88□□□□□ -0.35
LIMS2-213ENST00000469300 CCL19Q99731 98 aa12.88□□□□□ -0.35
LIMS2-213ENST00000469300 TMEM208Q9BTX3 173 aa12.88□□□□□ -0.35
LIMS2-213ENST00000469300 NPVFQ9HCQ7 196 aa12.88□□□□□ -0.35
LIMS2-213ENST00000469300 TRBV23-1A0A0A0MS06 115 aa12.88□□□□□ -0.35
LIMS2-213ENST00000469300 BMPR1BO00238 502 aa12.88□□□□□ -0.35
LIMS2-213ENST00000469300 IGHV1-2P23083 117 aa12.88□□□□□ -0.35
LIMS2-213ENST00000469300 ECSCRQ19T08 205 aa12.88□□□□□ -0.35
LIMS2-213ENST00000469300 DNM1P46Q6ZS02 220 aa12.88□□□□□ -0.35
LIMS2-213ENST00000469300 PUSL1Q8N0Z8 303 aaKnown RBP12.88□□□□□ -0.35
LIMS2-213ENST00000469300 OR4X1Q8NH49 305 aa12.88□□□□□ -0.35
LIMS2-213ENST00000469300 TMEM106BQ9NUM4 274 aa12.88□□□□□ -0.35
LIMS2-213ENST00000469300 PRR13Q9NZ81 148 aa12.88□□□□□ -0.35
LIMS2-213ENST00000469300 BLNKQ8WV28 456 aa12.88□□□□□ -0.35
LIMS2-213ENST00000469300 ZNF318Q5VUA4 2279 aa12.88□□□□□ -0.35
LIMS2-213ENST00000469300 FCN1O00602 326 aa12.87□□□□□ -0.35
LIMS2-213ENST00000469300 CRISP2P16562 243 aa12.87□□□□□ -0.35
LIMS2-213ENST00000469300 ATP5IP56385 69 aaPredicted RBP12.87□□□□□ -0.35
LIMS2-213ENST00000469300 RCC2Q9P258 522 aaKnown RBP12.87□□□□□ -0.35
LIMS2-213ENST00000469300 SERF2P84101 59 aa12.87□□□□□ -0.35
LIMS2-213ENST00000469300 C10orf113Q5VZT2 155 aa12.87□□□□□ -0.35
LIMS2-213ENST00000469300 ZNF385CQ66K41 422 aaPredicted RBP12.87□□□□□ -0.35
LIMS2-213ENST00000469300 DPPA3Q6W0C5 159 aa12.87□□□□□ -0.35
LIMS2-213ENST00000469300 C11orf42Q8N5U0 333 aa12.87□□□□□ -0.35
LIMS2-213ENST00000469300 A0A1B0GV90 55 aa12.87□□□□□ -0.35
LIMS2-213ENST00000469300 KIAA1324LA8MWY0 1029 aaPredicted RBP12.87□□□□□ -0.35
LIMS2-213ENST00000469300 IL18BPO95998 194 aa12.87□□□□□ -0.35
LIMS2-213ENST00000469300 CD99P14209 185 aa12.87□□□□□ -0.35
LIMS2-213ENST00000469300 BSXQ3C1V8 233 aa12.87□□□□□ -0.35
LIMS2-213ENST00000469300 DEPPQ9NTK1 212 aa12.87□□□□□ -0.35
LIMS2-213ENST00000469300 HILPDAQ9Y5L2 63 aa12.87□□□□□ -0.35
LIMS2-213ENST00000469300 VWA8A3KMH1 1905 aa12.87□□□□□ -0.35
LIMS2-213ENST00000469300 INTS1Q8N201 2190 aaKnown RBP12.87□□□□□ -0.35
LIMS2-213ENST00000469300 TM4SF5O14894 197 aa12.87□□□□□ -0.35
LIMS2-213ENST00000469300 ABHD12Q8N2K0 398 aa12.87□□□□□ -0.35
LIMS2-213ENST00000469300 NPDC1Q9NQX5 325 aaPredicted RBP12.87□□□□□ -0.35
LIMS2-213ENST00000469300 IGKV3D-15A0A087WSY6 115 aa12.86□□□□□ -0.35
LIMS2-213ENST00000469300 CTXND1A0A1B0GTU2 59 aa12.86□□□□□ -0.35
LIMS2-213ENST00000469300 EIF3GO75821 320 aaKnown RBP eCLIP12.86□□□□□ -0.35
LIMS2-213ENST00000469300 COX19Q49B96 90 aa12.86□□□□□ -0.35
LIMS2-213ENST00000469300 LYRM7Q5U5X0 104 aa12.86□□□□□ -0.35
LIMS2-213ENST00000469300 WDR73Q6P4I2 378 aa12.86□□□□□ -0.35
LIMS2-213ENST00000469300 REC114Q7Z4M0 266 aa12.86□□□□□ -0.35
LIMS2-213ENST00000469300 POC1AQ8NBT0 407 aa12.86□□□□□ -0.35
LIMS2-213ENST00000469300 NEUROG3Q9Y4Z2 214 aa12.86□□□□□ -0.35
LIMS2-213ENST00000469300 DOCK4Q8N1I0 1966 aa12.86□□□□□ -0.35
LIMS2-213ENST00000469300 STAG3L2P0CL84 134 aa12.86□□□□□ -0.35
LIMS2-213ENST00000469300 ELOBQ15370 118 aa12.86□□□□□ -0.35
LIMS2-213ENST00000469300 SLC35E3Q7Z769 313 aa12.86□□□□□ -0.35
LIMS2-213ENST00000469300 OR5AU1Q8NGC0 362 aa12.86□□□□□ -0.35
LIMS2-213ENST00000469300 IQCF6A8MYZ5 107 aa12.86□□□□□ -0.35
LIMS2-213ENST00000469300 PGLYRP1O75594 196 aaPredicted RBP12.86□□□□□ -0.35
LIMS2-213ENST00000469300 ANKRD55Q3KP44 614 aa12.86□□□□□ -0.35
LIMS2-213ENST00000469300 LRP11Q86VZ4 500 aa12.86□□□□□ -0.35
LIMS2-213ENST00000469300 OR4C13Q8NGP0 309 aa12.86□□□□□ -0.35
LIMS2-213ENST00000469300 METTL1Q9UBP6 276 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms