RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 C7orf50Q9BRJ6 194 aaKnown RBP2.55□□□□□ -2
LSM5-209ENST00000468872 ANAPC13Q9BS18 74 aa2.55□□□□□ -2
LSM5-209ENST00000468872 SLC25A31Q9H0C2 315 aa2.55□□□□□ -2
LSM5-209ENST00000468872 NAGKQ9UJ70 344 aa2.55□□□□□ -2
LSM5-209ENST00000468872 FBXL3Q9UKT7 428 aa2.55□□□□□ -2
LSM5-209ENST00000468872 SNX24Q9Y343 169 aa2.55□□□□□ -2
LSM5-209ENST00000468872 PRKDCP78527 4128 aaKnown RBP2.55□□□□□ -2
LSM5-209ENST00000468872 ZNF469Q96JG9 3925 aaPredicted RBP2.55□□□□□ -2
LSM5-209ENST00000468872 TENM3Q9P273 2699 aa2.55□□□□□ -2
LSM5-209ENST00000468872 CDK5RAP2Q96SN8 1893 aa2.54□□□□□ -2
LSM5-209ENST00000468872 MXRA5Q9NR99 2828 aa2.54□□□□□ -2
LSM5-209ENST00000468872 A0A1B0GTI1 187 aa2.54□□□□□ -2
LSM5-209ENST00000468872 F8VZ95 297 aa2.54□□□□□ -2
LSM5-209ENST00000468872 ENTPD6O75354 484 aa2.54□□□□□ -2
LSM5-209ENST00000468872 TRGV3P03979 118 aa2.54□□□□□ -2
LSM5-209ENST00000468872 RPA3P35244 121 aaPredicted RBP2.54□□□□□ -2
LSM5-209ENST00000468872 CDC34P49427 236 aaPredicted RBP2.54□□□□□ -2
LSM5-209ENST00000468872 DEFB103AP81534 67 aa2.54□□□□□ -2
LSM5-209ENST00000468872 BAMBIQ13145 260 aa2.54□□□□□ -2
LSM5-209ENST00000468872 ENDOGQ14249 297 aaKnown RBP2.54□□□□□ -2
LSM5-209ENST00000468872 BSXQ3C1V8 233 aa2.54□□□□□ -2
LSM5-209ENST00000468872 TTMPQ5BVD1 217 aa2.54□□□□□ -2
LSM5-209ENST00000468872 TMEM215Q68D42 235 aa2.54□□□□□ -2
LSM5-209ENST00000468872 PLEKHG7Q6ZR37 379 aa2.54□□□□□ -2
LSM5-209ENST00000468872 DPPA2Q7Z7J5 298 aa2.54□□□□□ -2
LSM5-209ENST00000468872 CALHM3Q86XJ0 350 aa2.54□□□□□ -2
LSM5-209ENST00000468872 CRLF3Q8IUI8 442 aa2.54□□□□□ -2
LSM5-209ENST00000468872 AMN1Q8IY45 258 aa2.54□□□□□ -2
LSM5-209ENST00000468872 ZFP82Q8N141 532 aa2.54□□□□□ -2
LSM5-209ENST00000468872 C2orf15Q8WU43 125 aaKnown RBP2.54□□□□□ -2
LSM5-209ENST00000468872 PHF10Q8WUB8 498 aaKnown RBP2.54□□□□□ -2
LSM5-209ENST00000468872 DNAJB3Q8WWF6 145 aa2.54□□□□□ -2
LSM5-209ENST00000468872 OR2V2Q96R30 315 aa2.54□□□□□ -2
LSM5-209ENST00000468872 PITX2Q99697 317 aa2.54□□□□□ -2
LSM5-209ENST00000468872 SUCNR1Q9BXA5 334 aa2.54□□□□□ -2
LSM5-209ENST00000468872 PLA2G12AQ9BZM1 189 aa2.54□□□□□ -2
LSM5-209ENST00000468872 NKIRAS1Q9NYS0 192 aa2.54□□□□□ -2
LSM5-209ENST00000468872 R4GN34 69 aa2.54□□□□□ -2
LSM5-209ENST00000468872 MUC2Q02817 5179 aa2.54□□□□□ -2
LSM5-209ENST00000468872 MUC22E2RYF6 1773 aaPredicted RBP2.54□□□□□ -2
LSM5-209ENST00000468872 HERC1Q15751 4861 aa2.53□□□□□ -2
LSM5-209ENST00000468872 ABCB11O95342 1321 aa2.53□□□□□ -2
LSM5-209ENST00000468872 PLXNB3Q9ULL4 1909 aa2.53□□□□□ -2
LSM5-209ENST00000468872 IGHV3-43A0A0B4J1X8 118 aa2.53□□□□□ -2
LSM5-209ENST00000468872 H3BQ85 93 aa2.53□□□□□ -2
LSM5-209ENST00000468872 J3QLI3 93 aa2.53□□□□□ -2
LSM5-209ENST00000468872 CRTAPO75718 401 aaPredicted RBP2.53□□□□□ -2
LSM5-209ENST00000468872 OCMP0CE72 109 aaPredicted RBP2.53□□□□□ -2
LSM5-209ENST00000468872 SCGB1C2P0DMR2 95 aa2.53□□□□□ -2
LSM5-209ENST00000468872 PSKH1P11801 424 aa2.53□□□□□ -2
LSM5-209ENST00000468872 PTHLHP12272 177 aa2.53□□□□□ -2
LSM5-209ENST00000468872 HRES1P13985 223 aa2.53□□□□□ -2
LSM5-209ENST00000468872 COL8A2P25067 703 aa2.53□□□□□ -2
LSM5-209ENST00000468872 HOXA6P31267 233 aa2.53□□□□□ -2
LSM5-209ENST00000468872 HAAOP46952 286 aa2.53□□□□□ -2
LSM5-209ENST00000468872 HBG1P69891 147 aa2.53□□□□□ -2
LSM5-209ENST00000468872 HBG2P69892 147 aa2.53□□□□□ -2
LSM5-209ENST00000468872 PRKCDQ05655 676 aa2.53□□□□□ -2
LSM5-209ENST00000468872 BIKQ13323 160 aa2.53□□□□□ -2
LSM5-209ENST00000468872 LRRC6Q86X45 466 aa2.53□□□□□ -2
LSM5-209ENST00000468872 FUNDC1Q8IVP5 155 aa2.53□□□□□ -2
LSM5-209ENST00000468872 TMEM156Q8N614 296 aa2.53□□□□□ -2
LSM5-209ENST00000468872 OR8J2Q8NGG1 315 aa2.53□□□□□ -2
LSM5-209ENST00000468872 SCGB1C1Q8TD33 95 aa2.53□□□□□ -2
LSM5-209ENST00000468872 TWIST2Q8WVJ9 160 aa2.53□□□□□ -2
LSM5-209ENST00000468872 IFT81Q8WYA0 676 aa2.53□□□□□ -2
LSM5-209ENST00000468872 MBOAT7Q96N66 472 aa2.53□□□□□ -2
LSM5-209ENST00000468872 SPZ1Q9BXG8 430 aa2.53□□□□□ -2
LSM5-209ENST00000468872 TXNIPQ9H3M7 391 aa2.53□□□□□ -2
LSM5-209ENST00000468872 TAS2R1Q9NYW7 299 aa2.53□□□□□ -2
LSM5-209ENST00000468872 C14orf166Q9Y224 244 aaKnown RBP2.53□□□□□ -2
LSM5-209ENST00000468872 THADAQ6YHU6 1953 aa2.52□□□□□ -2.01
LSM5-209ENST00000468872 ATG2AQ2TAZ0 1938 aa2.52□□□□□ -2.01
LSM5-209ENST00000468872 TRAV8-3A0A0A6YYJ7 113 aa2.52□□□□□ -2.01
LSM5-209ENST00000468872 IGHV3-21A0A0B4J1V1 117 aa2.52□□□□□ -2.01
LSM5-209ENST00000468872 A0A1W2PNN7 141 aa2.52□□□□□ -2.01
LSM5-209ENST00000468872 C4orf51C9J302 202 aa2.52□□□□□ -2.01
LSM5-209ENST00000468872 UBDO15205 165 aa2.52□□□□□ -2.01
LSM5-209ENST00000468872 PDCD6O75340 191 aa2.52□□□□□ -2.01
LSM5-209ENST00000468872 CA2P00918 260 aa2.52□□□□□ -2.01
LSM5-209ENST00000468872 SLC2A1P11166 492 aa2.52□□□□□ -2.01
LSM5-209ENST00000468872 COILP38432 576 aaPredicted RBP2.52□□□□□ -2.01
LSM5-209ENST00000468872 KLF3P57682 345 aaPredicted RBP2.52□□□□□ -2.01
LSM5-209ENST00000468872 PRDX1Q06830 199 aaKnown RBP2.52□□□□□ -2.01
LSM5-209ENST00000468872 ZNHIT3Q15649 155 aaPredicted RBP2.52□□□□□ -2.01
LSM5-209ENST00000468872 OR10J3Q5JRS4 329 aa2.52□□□□□ -2.01
LSM5-209ENST00000468872 RBM48Q5RL73 367 aaKnown RBP2.52□□□□□ -2.01
LSM5-209ENST00000468872 ZNF660Q6AZW8 331 aaPredicted RBP2.52□□□□□ -2.01
LSM5-209ENST00000468872 FAM151BQ6UXP7 276 aa2.52□□□□□ -2.01
LSM5-209ENST00000468872 OLFM3Q96PB7 478 aa2.52□□□□□ -2.01
LSM5-209ENST00000468872 HBEGFQ99075 208 aa2.52□□□□□ -2.01
LSM5-209ENST00000468872 APOL4Q9BPW4 351 aa2.52□□□□□ -2.01
LSM5-209ENST00000468872 ZNF426Q9BUY5 554 aa2.52□□□□□ -2.01
LSM5-209ENST00000468872 ULBP1Q9BZM6 244 aa2.52□□□□□ -2.01
LSM5-209ENST00000468872 METTL8Q9H825 291 aaKnown RBP2.52□□□□□ -2.01
LSM5-209ENST00000468872 C1orf109Q9NX04 203 aa2.52□□□□□ -2.01
LSM5-209ENST00000468872 ZNF586Q9NXT0 402 aa2.52□□□□□ -2.01
LSM5-209ENST00000468872 TAS2R13Q9NYV9 303 aa2.52□□□□□ -2.01
LSM5-209ENST00000468872 ICOSQ9Y6W8 199 aa2.52□□□□□ -2.01
LSM5-209ENST00000468872 TACC2O95359 2948 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms