RNA–Protein interactions for RNA: ENST00000468836.1

CLRN1-204, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-204ENST00000468836 SPATA2Q9UM82 520 aa10.21□□□□□ -0.77
CLRN1-204ENST00000468836 RRASP10301 218 aa10.2□□□□□ -0.78
CLRN1-204ENST00000468836 MYCNOSP40205 109 aa10.2□□□□□ -0.78
CLRN1-204ENST00000468836 PSG5Q15238 335 aa10.2□□□□□ -0.78
CLRN1-204ENST00000468836 CNIH2Q6PI25 160 aa10.2□□□□□ -0.78
CLRN1-204ENST00000468836 LCNL1Q6ZST4 164 aa10.2□□□□□ -0.78
CLRN1-204ENST00000468836 REC114Q7Z4M0 266 aa10.2□□□□□ -0.78
CLRN1-204ENST00000468836 H1FOOQ8IZA3 346 aaPredicted RBP10.2□□□□□ -0.78
CLRN1-204ENST00000468836 TCTEX1D1Q8N7M0 179 aa10.2□□□□□ -0.78
CLRN1-204ENST00000468836 YIPF6Q96EC8 236 aa10.2□□□□□ -0.78
CLRN1-204ENST00000468836 HARBI1Q96MB7 349 aa10.2□□□□□ -0.78
CLRN1-204ENST00000468836 MCRIP2Q9BUT9 160 aaKnown RBP10.2□□□□□ -0.78
CLRN1-204ENST00000468836 NECAP2Q9NVZ3 263 aa10.2□□□□□ -0.78
CLRN1-204ENST00000468836 IGKV1D-8A0A087WSZ0 117 aa10.19□□□□□ -0.78
CLRN1-204ENST00000468836 A0A1W2PN81 502 aa10.19□□□□□ -0.78
CLRN1-204ENST00000468836 G3V318 75 aa10.19□□□□□ -0.78
CLRN1-204ENST00000468836 SHOXO15266 292 aa10.19□□□□□ -0.78
CLRN1-204ENST00000468836 SLC25A17O43808 307 aa10.19□□□□□ -0.78
CLRN1-204ENST00000468836 SLC22A5O76082 557 aa10.19□□□□□ -0.78
CLRN1-204ENST00000468836 CA2P00918 260 aa10.19□□□□□ -0.78
CLRN1-204ENST00000468836 IGKV1-16P04430 117 aa10.19□□□□□ -0.78
CLRN1-204ENST00000468836 NFYAP23511 347 aaPredicted RBP10.19□□□□□ -0.78
CLRN1-204ENST00000468836 CHRNA7P36544 502 aa10.19□□□□□ -0.78
CLRN1-204ENST00000468836 TGFBR1P36897 503 aa10.19□□□□□ -0.78
CLRN1-204ENST00000468836 CDX1P47902 265 aaPredicted RBP10.19□□□□□ -0.78
CLRN1-204ENST00000468836 GNB1P62873 340 aa10.19□□□□□ -0.78
CLRN1-204ENST00000468836 CX3CL1P78423 397 aa10.19□□□□□ -0.78
CLRN1-204ENST00000468836 UBE2NLQ5JXB2 153 aa10.19□□□□□ -0.78
CLRN1-204ENST00000468836 C18orf65Q6ZTR6 163 aa10.19□□□□□ -0.78
CLRN1-204ENST00000468836 MRPL41Q8IXM3 137 aaKnown RBP10.19□□□□□ -0.78
CLRN1-204ENST00000468836 ZNF645Q8N7E2 425 aa10.19□□□□□ -0.78
CLRN1-204ENST00000468836 LINC00482Q8N8I6 264 aa10.19□□□□□ -0.78
CLRN1-204ENST00000468836 WFDC9Q8NEX5 89 aa10.19□□□□□ -0.78
CLRN1-204ENST00000468836 BEST4Q8NFU0 473 aa10.19□□□□□ -0.78
CLRN1-204ENST00000468836 SLC25A38Q96DW6 304 aa10.19□□□□□ -0.78
CLRN1-204ENST00000468836 S100A16Q96FQ6 103 aaKnown RBP10.19□□□□□ -0.78
CLRN1-204ENST00000468836 IFT46Q9NQC8 304 aa10.19□□□□□ -0.78
CLRN1-204ENST00000468836 ANXA10Q9UJ72 324 aa10.19□□□□□ -0.78
CLRN1-204ENST00000468836 GAB2Q9UQC2 676 aa10.19□□□□□ -0.78
CLRN1-204ENST00000468836 FOXA2Q9Y261 457 aaPredicted RBP10.19□□□□□ -0.78
CLRN1-204ENST00000468836 MRPS7Q9Y2R9 242 aaKnown RBP10.19□□□□□ -0.78
CLRN1-204ENST00000468836 PRELID3BQ9Y3B1 194 aa10.19□□□□□ -0.78
CLRN1-204ENST00000468836 OR2W1Q9Y3N9 320 aa10.19□□□□□ -0.78
CLRN1-204ENST00000468836 CCL24O00175 119 aa10.18□□□□□ -0.78
CLRN1-204ENST00000468836 TUSC2O75896 110 aa10.18□□□□□ -0.78
CLRN1-204ENST00000468836 CNIH1O95406 144 aa10.18□□□□□ -0.78
CLRN1-204ENST00000468836 PSMB8P28062 276 aa10.18□□□□□ -0.78
CLRN1-204ENST00000468836 CBX5P45973 191 aa10.18□□□□□ -0.78
CLRN1-204ENST00000468836 LGALS7P47929 136 aa10.18□□□□□ -0.78
CLRN1-204ENST00000468836 LINC00205P59089 165 aa10.18□□□□□ -0.78
CLRN1-204ENST00000468836 CFHR3Q02985 330 aa10.18□□□□□ -0.78
CLRN1-204ENST00000468836 VMA21Q3ZAQ7 101 aa10.18□□□□□ -0.78
CLRN1-204ENST00000468836 KPRPQ5T749 579 aaPredicted RBP10.18□□□□□ -0.78
CLRN1-204ENST00000468836 PYHIN1Q6K0P9 492 aa10.18□□□□□ -0.78
CLRN1-204ENST00000468836 UNQ5815/PRO19632Q6UWF5 114 aa10.18□□□□□ -0.78
CLRN1-204ENST00000468836 PPP1R27Q86WC6 154 aa10.18□□□□□ -0.78
CLRN1-204ENST00000468836 SAMD12Q8N8I0 201 aa10.18□□□□□ -0.78
CLRN1-204ENST00000468836 BVESQ8NE79 360 aa10.18□□□□□ -0.78
CLRN1-204ENST00000468836 GRPEL2Q8TAA5 225 aa10.18□□□□□ -0.78
CLRN1-204ENST00000468836 C4orf3Q8WVX3 66 aa10.18□□□□□ -0.78
CLRN1-204ENST00000468836 ARPC1AQ92747 370 aa10.18□□□□□ -0.78
CLRN1-204ENST00000468836 DUX3Q96PT4 197 aa10.18□□□□□ -0.78
CLRN1-204ENST00000468836 DCUN1D5Q9BTE7 237 aa10.18□□□□□ -0.78
CLRN1-204ENST00000468836 VWFP04275 2813 aa10.17□□□□□ -0.78
CLRN1-204ENST00000468836 SSX5O60225 188 aa10.17□□□□□ -0.78
CLRN1-204ENST00000468836 PROP1O75360 226 aa10.17□□□□□ -0.78
CLRN1-204ENST00000468836 PRB2P02812 416 aaPredicted RBP10.17□□□□□ -0.78
CLRN1-204ENST00000468836 RPS19P39019 145 aaKnown RBP10.17□□□□□ -0.78
CLRN1-204ENST00000468836 NDPQ00604 133 aa10.17□□□□□ -0.78
CLRN1-204ENST00000468836 FXYD3Q14802 87 aa10.17□□□□□ -0.78
CLRN1-204ENST00000468836 DEFB136Q30KP8 78 aa10.17□□□□□ -0.78
CLRN1-204ENST00000468836 ACTBL2Q562R1 376 aa10.17□□□□□ -0.78
CLRN1-204ENST00000468836 TMEM69Q5SWH9 247 aa10.17□□□□□ -0.78
CLRN1-204ENST00000468836 FOXB2Q5VYV0 432 aa10.17□□□□□ -0.78
CLRN1-204ENST00000468836 ZNF562Q6V9R5 426 aa10.17□□□□□ -0.78
CLRN1-204ENST00000468836 ETV3LQ6ZN32 361 aa10.17□□□□□ -0.78
CLRN1-204ENST00000468836 KCTD9Q7L273 389 aa10.17□□□□□ -0.78
CLRN1-204ENST00000468836 RNF152Q8N8N0 203 aa10.17□□□□□ -0.78
CLRN1-204ENST00000468836 OR5M8Q8NGP6 311 aa10.17□□□□□ -0.78
CLRN1-204ENST00000468836 FAM103A1Q9BTL3 118 aaKnown RBP10.17□□□□□ -0.78
CLRN1-204ENST00000468836 FUNDC2Q9BWH2 189 aa10.17□□□□□ -0.78
CLRN1-204ENST00000468836 AUNIPQ9H7T9 357 aa10.17□□□□□ -0.78
CLRN1-204ENST00000468836 VSIG4Q9Y279 399 aa10.17□□□□□ -0.78
CLRN1-204ENST00000468836 SMIM31A0A1B0GVY4 71 aa10.16□□□□□ -0.78
CLRN1-204ENST00000468836 FCN1O00602 326 aa10.16□□□□□ -0.78
CLRN1-204ENST00000468836 CREBL2O60519 120 aaPredicted RBP10.16□□□□□ -0.78
CLRN1-204ENST00000468836 CRYZL1O95825 349 aa10.16□□□□□ -0.78
CLRN1-204ENST00000468836 FCER2P06734 321 aa10.16□□□□□ -0.78
CLRN1-204ENST00000468836 PPIFP30405 207 aaKnown RBP10.16□□□□□ -0.78
CLRN1-204ENST00000468836 DUTP33316 252 aaKnown RBP10.16□□□□□ -0.78
CLRN1-204ENST00000468836 VBP1P61758 197 aa10.16□□□□□ -0.78
CLRN1-204ENST00000468836 NCS1P62166 190 aa10.16□□□□□ -0.78
CLRN1-204ENST00000468836 HOGA1Q86XE5 327 aa10.16□□□□□ -0.78
CLRN1-204ENST00000468836 GVQW1Q8N7I0 195 aa10.16□□□□□ -0.78
CLRN1-204ENST00000468836 MRAPQ8TCY5 172 aa10.16□□□□□ -0.78
CLRN1-204ENST00000468836 TCTEX1D2Q8WW35 142 aa10.16□□□□□ -0.78
CLRN1-204ENST00000468836 SLC25A46Q96AG3 418 aa10.16□□□□□ -0.78
CLRN1-204ENST00000468836 KCTD12Q96CX2 325 aaKnown RBP10.16□□□□□ -0.78
CLRN1-204ENST00000468836 RAX2Q96IS3 184 aa10.16□□□□□ -0.78
CLRN1-204ENST00000468836 UBE2E2Q96LR5 201 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms