RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 TOR2AQ5JU69 321 aa11.72□□□□□ -0.53
COL27A1-203ENST00000468565 DHRS7BQ6IAN0 325 aaPredicted RBP11.72□□□□□ -0.53
COL27A1-203ENST00000468565 KCNRGQ8N5I3 272 aa11.72□□□□□ -0.53
COL27A1-203ENST00000468565 TPRX1Q8N7U7 411 aa11.72□□□□□ -0.53
COL27A1-203ENST00000468565 PPP1R1CQ8WVI7 109 aa11.72□□□□□ -0.53
COL27A1-203ENST00000468565 SSX3Q99909 188 aa11.72□□□□□ -0.53
COL27A1-203ENST00000468565 TNFSF18Q9UNG2 199 aa11.72□□□□□ -0.53
COL27A1-203ENST00000468565 KANTRA0A1W2PQU2 76 aa11.72□□□□□ -0.53
COL27A1-203ENST00000468565 H3BUX3 64 aa11.72□□□□□ -0.53
COL27A1-203ENST00000468565 SLC33A1O00400 549 aaPredicted RBP11.72□□□□□ -0.53
COL27A1-203ENST00000468565 PGAM2P15259 253 aa11.72□□□□□ -0.53
COL27A1-203ENST00000468565 LRRC75BQ2VPJ9 315 aa11.72□□□□□ -0.53
COL27A1-203ENST00000468565 LRRC37A5PQ49AS3 106 aa11.72□□□□□ -0.53
COL27A1-203ENST00000468565 OVCH2Q7RTZ1 564 aa11.72□□□□□ -0.53
COL27A1-203ENST00000468565 Q8NFD4 153 aa11.72□□□□□ -0.53
COL27A1-203ENST00000468565 PCNPQ8WW12 178 aaKnown RBP11.72□□□□□ -0.53
COL27A1-203ENST00000468565 MAFIPQ8WZ33 124 aa11.72□□□□□ -0.53
COL27A1-203ENST00000468565 TMEM230Q96A57 120 aa11.72□□□□□ -0.53
COL27A1-203ENST00000468565 C14orf166Q9Y224 244 aaKnown RBP11.72□□□□□ -0.53
COL27A1-203ENST00000468565 SESN1Q9Y6P5 492 aa11.72□□□□□ -0.53
COL27A1-203ENST00000468565 MEX3AA1L020 520 aaKnown RBP11.71□□□□□ -0.53
COL27A1-203ENST00000468565 SDCBPO00560 298 aaPredicted RBP11.71□□□□□ -0.53
COL27A1-203ENST00000468565 DEGS1O15121 323 aa11.71□□□□□ -0.53
COL27A1-203ENST00000468565 DTYMKP23919 212 aa11.71□□□□□ -0.53
COL27A1-203ENST00000468565 IL13RA2Q14627 380 aa11.71□□□□□ -0.53
COL27A1-203ENST00000468565 AADACL3Q5VUY0 350 aa11.71□□□□□ -0.53
COL27A1-203ENST00000468565 ALKAL2Q6UX46 152 aa11.71□□□□□ -0.53
COL27A1-203ENST00000468565 OSR2Q8N2R0 312 aa11.71□□□□□ -0.53
COL27A1-203ENST00000468565 LINC00469Q8N7U9 141 aa11.71□□□□□ -0.53
COL27A1-203ENST00000468565 WFDC12Q8WWY7 111 aa11.71□□□□□ -0.53
COL27A1-203ENST00000468565 CORO2AQ92828 525 aa11.71□□□□□ -0.53
COL27A1-203ENST00000468565 RTBDNQ9BSG5 229 aaPredicted RBP11.71□□□□□ -0.53
COL27A1-203ENST00000468565 NMES1Q9C002 83 aa11.71□□□□□ -0.53
COL27A1-203ENST00000468565 C16orf95Q9H693 158 aa11.71□□□□□ -0.53
COL27A1-203ENST00000468565 RAB18Q9NP72 206 aa11.71□□□□□ -0.53
COL27A1-203ENST00000468565 MED9Q9NWA0 146 aa11.71□□□□□ -0.53
COL27A1-203ENST00000468565 RDH8Q9NYR8 311 aa11.71□□□□□ -0.53
COL27A1-203ENST00000468565 TRGV10A0A0A0MS01 117 aa11.7□□□□□ -0.54
COL27A1-203ENST00000468565 C13orf42A0A1B0GVH6 325 aa11.7□□□□□ -0.54
COL27A1-203ENST00000468565 I3L521 148 aa11.7□□□□□ -0.54
COL27A1-203ENST00000468565 ARG1P05089 322 aa11.7□□□□□ -0.54
COL27A1-203ENST00000468565 ATF4P18848 351 aaPredicted RBP11.7□□□□□ -0.54
COL27A1-203ENST00000468565 ZNF660Q6AZW8 331 aaPredicted RBP11.7□□□□□ -0.54
COL27A1-203ENST00000468565 Q6ZSV7 163 aa11.7□□□□□ -0.54
COL27A1-203ENST00000468565 ACOT7LQ6ZUV0 252 aa11.7□□□□□ -0.54
COL27A1-203ENST00000468565 LINC01006Q8NI28 216 aa11.7□□□□□ -0.54
COL27A1-203ENST00000468565 MALSU1Q96EH3 234 aa11.7□□□□□ -0.54
COL27A1-203ENST00000468565 CYYR1Q96J86 154 aa11.7□□□□□ -0.54
COL27A1-203ENST00000468565 CMSS1Q9BQ75 279 aaKnown RBP11.7□□□□□ -0.54
COL27A1-203ENST00000468565 GAL3ST2Q9H3Q3 398 aa11.7□□□□□ -0.54
COL27A1-203ENST00000468565 IFT22Q9H7X7 185 aa11.7□□□□□ -0.54
COL27A1-203ENST00000468565 TAS2R3Q9NYW6 316 aa11.7□□□□□ -0.54
COL27A1-203ENST00000468565 AK3Q9UIJ7 227 aa11.7□□□□□ -0.54
COL27A1-203ENST00000468565 BCL2L11O43521 198 aa11.7□□□□□ -0.54
COL27A1-203ENST00000468565 PSMB6P28072 239 aa11.7□□□□□ -0.54
COL27A1-203ENST00000468565 CHATP28329 748 aa11.7□□□□□ -0.54
COL27A1-203ENST00000468565 AESQ08117 197 aa11.7□□□□□ -0.54
COL27A1-203ENST00000468565 PRR31Q5SQ13 230 aa11.7□□□□□ -0.54
COL27A1-203ENST00000468565 LIAT1Q6ZQX7 453 aa11.7□□□□□ -0.54
COL27A1-203ENST00000468565 LHFPL4Q7Z7J7 247 aa11.7□□□□□ -0.54
COL27A1-203ENST00000468565 INO80EQ8NBZ0 244 aaPredicted RBP11.7□□□□□ -0.54
COL27A1-203ENST00000468565 FAAP24Q9BTP7 215 aa11.7□□□□□ -0.54
COL27A1-203ENST00000468565 TMEM133Q9H2Q1 129 aa11.7□□□□□ -0.54
COL27A1-203ENST00000468565 CHMP1AQ9HD42 196 aaPredicted RBP11.7□□□□□ -0.54
COL27A1-203ENST00000468565 ANXA10Q9UJ72 324 aa11.7□□□□□ -0.54
COL27A1-203ENST00000468565 RNF114Q9Y508 228 aa11.7□□□□□ -0.54
COL27A1-203ENST00000468565 ODAMA1E959 279 aa11.69□□□□□ -0.54
COL27A1-203ENST00000468565 SPDEFO95238 335 aa11.69□□□□□ -0.54
COL27A1-203ENST00000468565 NMBP08949 121 aa11.69□□□□□ -0.54
COL27A1-203ENST00000468565 KRBOX4Q5JUW0 171 aa11.69□□□□□ -0.54
COL27A1-203ENST00000468565 HEPN1Q6WQI6 88 aa11.69□□□□□ -0.54
COL27A1-203ENST00000468565 ST8SIA2Q92186 375 aa11.69□□□□□ -0.54
COL27A1-203ENST00000468565 COQ2Q96H96 371 aa11.69□□□□□ -0.54
COL27A1-203ENST00000468565 NECAP2Q9NVZ3 263 aa11.69□□□□□ -0.54
COL27A1-203ENST00000468565 PFDN2Q9UHV9 154 aa11.69□□□□□ -0.54
COL27A1-203ENST00000468565 NBEAL1Q6ZS30 2694 aa11.69□□□□□ -0.54
COL27A1-203ENST00000468565 IGHV2-26A0A0B4J1V2 119 aa11.68□□□□□ -0.54
COL27A1-203ENST00000468565 PI3P19957 117 aa11.68□□□□□ -0.54
COL27A1-203ENST00000468565 GLIPR1P48060 266 aa11.68□□□□□ -0.54
COL27A1-203ENST00000468565 ATXN7L3Q14CW9 347 aaPredicted RBP11.68□□□□□ -0.54
COL27A1-203ENST00000468565 PXDC1Q5TGL8 231 aa11.68□□□□□ -0.54
COL27A1-203ENST00000468565 MINOS1Q5TGZ0 78 aa11.68□□□□□ -0.54
COL27A1-203ENST00000468565 RBPMSQ93062 196 aaKnown RBP11.68□□□□□ -0.54
COL27A1-203ENST00000468565 ZNF2Q9BSG1 426 aaPredicted RBP11.68□□□□□ -0.54
COL27A1-203ENST00000468565 HDHD3Q9BSH5 251 aaPredicted RBP11.68□□□□□ -0.54
COL27A1-203ENST00000468565 CLEC7AQ9BXN2 247 aa11.68□□□□□ -0.54
COL27A1-203ENST00000468565 NCOR1P1Q9H4R4 102 aa11.68□□□□□ -0.54
COL27A1-203ENST00000468565 MBD2Q9UBB5 411 aa11.68□□□□□ -0.54
COL27A1-203ENST00000468565 ST3GAL6Q9Y274 331 aa11.68□□□□□ -0.54
COL27A1-203ENST00000468565 MINOS1-NBL1R4GNA1 71 aa11.68□□□□□ -0.54
COL27A1-203ENST00000468565 TRAV24A0A0B4J272 114 aa11.68□□□□□ -0.54
COL27A1-203ENST00000468565 TOR1AO14656 332 aa11.68□□□□□ -0.54
COL27A1-203ENST00000468565 GEMIN2O14893 280 aaKnown RBP11.68□□□□□ -0.54
COL27A1-203ENST00000468565 CTSDP07339 412 aaPredicted RBP11.68□□□□□ -0.54
COL27A1-203ENST00000468565 FCGR3AP08637 254 aa11.68□□□□□ -0.54
COL27A1-203ENST00000468565 KCNJ3P48549 501 aa11.68□□□□□ -0.54
COL27A1-203ENST00000468565 PROK1P58294 105 aa11.68□□□□□ -0.54
COL27A1-203ENST00000468565 SUPT4H1P63272 117 aaKnown RBP11.68□□□□□ -0.54
COL27A1-203ENST00000468565 PAX5Q02548 391 aa11.68□□□□□ -0.54
COL27A1-203ENST00000468565 PAN3Q58A45 887 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms