RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 MOB1BQ7L9L4 216 aa6.84□□□□□ -1.31
BRCA1-208ENST00000468300 DEFB108BQ8NET1 73 aa6.84□□□□□ -1.31
BRCA1-208ENST00000468300 OR5M8Q8NGP6 311 aa6.84□□□□□ -1.31
BRCA1-208ENST00000468300 MRGPRDQ8TDS7 321 aa6.84□□□□□ -1.31
BRCA1-208ENST00000468300 CCL17Q92583 94 aa6.84□□□□□ -1.31
BRCA1-208ENST00000468300 HARBI1Q96MB7 349 aa6.84□□□□□ -1.31
BRCA1-208ENST00000468300 OR2A7Q96R45 310 aa6.84□□□□□ -1.31
BRCA1-208ENST00000468300 LPAR2Q9HBW0 351 aa6.84□□□□□ -1.31
BRCA1-208ENST00000468300 DYNLRB1Q9NP97 96 aa6.84□□□□□ -1.31
BRCA1-208ENST00000468300 CRYM-AS1A6NIL9 109 aa6.84□□□□□ -1.32
BRCA1-208ENST00000468300 MGST3O14880 152 aa6.84□□□□□ -1.32
BRCA1-208ENST00000468300 CLDN1O95832 211 aa6.84□□□□□ -1.32
BRCA1-208ENST00000468300 HLA-AP01891 365 aaKnown RBP6.84□□□□□ -1.32
BRCA1-208ENST00000468300 SEC61A1P61619 476 aaKnown RBP6.84□□□□□ -1.32
BRCA1-208ENST00000468300 GNMTQ14749 295 aa6.84□□□□□ -1.32
BRCA1-208ENST00000468300 C17orf58Q2M2W7 97 aa6.84□□□□□ -1.32
BRCA1-208ENST00000468300 ZNF818PQ6ZRF7 136 aa6.84□□□□□ -1.32
BRCA1-208ENST00000468300 OR2AK2Q8NG84 335 aa6.84□□□□□ -1.32
BRCA1-208ENST00000468300 DLL4Q9NR61 685 aa6.84□□□□□ -1.32
BRCA1-208ENST00000468300 YAE1D1Q9NRH1 226 aa6.84□□□□□ -1.32
BRCA1-208ENST00000468300 CHD6Q8TD26 2715 aa6.83□□□□□ -1.32
BRCA1-208ENST00000468300 ZFHX3Q15911 3703 aa6.83□□□□□ -1.32
BRCA1-208ENST00000468300 SFT2D2O95562 160 aa6.83□□□□□ -1.32
BRCA1-208ENST00000468300 IFNA2P01563 188 aa6.83□□□□□ -1.32
BRCA1-208ENST00000468300 HBZP02008 142 aa6.83□□□□□ -1.32
BRCA1-208ENST00000468300 ERP29P30040 261 aaKnown RBP6.83□□□□□ -1.32
BRCA1-208ENST00000468300 LOXL3P58215 753 aa6.83□□□□□ -1.32
BRCA1-208ENST00000468300 FGL1Q08830 312 aa6.83□□□□□ -1.32
BRCA1-208ENST00000468300 NHLRC2Q8NBF2 726 aa6.83□□□□□ -1.32
BRCA1-208ENST00000468300 OR11H4Q8NGC9 324 aa6.83□□□□□ -1.32
BRCA1-208ENST00000468300 ZNF436Q9C0F3 470 aaPredicted RBP6.83□□□□□ -1.32
BRCA1-208ENST00000468300 CELSR2Q9HCU4 2923 aa6.83□□□□□ -1.32
BRCA1-208ENST00000468300 ODAMA1E959 279 aa6.83□□□□□ -1.32
BRCA1-208ENST00000468300 SLC22A5O76082 557 aa6.83□□□□□ -1.32
BRCA1-208ENST00000468300 SIX6O95475 246 aa6.83□□□□□ -1.32
BRCA1-208ENST00000468300 DUS4LO95620 317 aaKnown RBP6.83□□□□□ -1.32
BRCA1-208ENST00000468300 FSTL3O95633 263 aa6.83□□□□□ -1.32
BRCA1-208ENST00000468300 HLA-GP17693 338 aa6.83□□□□□ -1.32
BRCA1-208ENST00000468300 FXYD4P59646 89 aa6.83□□□□□ -1.32
BRCA1-208ENST00000468300 SNRPD2P62316 118 aaKnown RBP6.83□□□□□ -1.32
BRCA1-208ENST00000468300 SRSF4Q08170 494 aaKnown RBP6.83□□□□□ -1.32
BRCA1-208ENST00000468300 EIF4EBP1Q13541 118 aaPredicted RBP6.83□□□□□ -1.32
BRCA1-208ENST00000468300 OR52L2PQ8NGH6 319 aa6.83□□□□□ -1.32
BRCA1-208ENST00000468300 R3HDM4Q96D70 268 aa6.83□□□□□ -1.32
BRCA1-208ENST00000468300 GPHA2Q96T91 129 aa6.83□□□□□ -1.32
BRCA1-208ENST00000468300 FAM234AQ9H0X4 552 aa6.83□□□□□ -1.32
BRCA1-208ENST00000468300 ZNF665Q9H7R5 613 aa6.83□□□□□ -1.32
BRCA1-208ENST00000468300 PLEKHF2Q9H8W4 249 aa6.83□□□□□ -1.32
BRCA1-208ENST00000468300 LINC00574Q9H8X3 128 aa6.83□□□□□ -1.32
BRCA1-208ENST00000468300 PPIAL4EA0A075B759 164 aa6.82□□□□□ -1.32
BRCA1-208ENST00000468300 PPIAL4DF5H284 164 aa6.82□□□□□ -1.32
BRCA1-208ENST00000468300 TCF21O43680 179 aa6.82□□□□□ -1.32
BRCA1-208ENST00000468300 SSNA1O43805 119 aa6.82□□□□□ -1.32
BRCA1-208ENST00000468300 ZNF728P0DKX0 622 aa6.82□□□□□ -1.32
BRCA1-208ENST00000468300 PPIAL4FP0DN26 164 aa6.82□□□□□ -1.32
BRCA1-208ENST00000468300 ECI1P42126 302 aa6.82□□□□□ -1.32
BRCA1-208ENST00000468300 EDDM3AQ14507 147 aa6.82□□□□□ -1.32
BRCA1-208ENST00000468300 ZNF841Q6ZN19 808 aa6.82□□□□□ -1.32
BRCA1-208ENST00000468300 C12orf45Q8N5I9 185 aaPredicted RBP6.82□□□□□ -1.32
BRCA1-208ENST00000468300 TOMM40LQ969M1 308 aa6.82□□□□□ -1.32
BRCA1-208ENST00000468300 SUCNR1Q9BXA5 334 aa6.82□□□□□ -1.32
BRCA1-208ENST00000468300 GPN1Q9HCN4 374 aaPredicted RBP6.82□□□□□ -1.32
BRCA1-208ENST00000468300 SLC2A9Q9NRM0 540 aa6.82□□□□□ -1.32
BRCA1-208ENST00000468300 KAAG1Q9UBP8 84 aa6.82□□□□□ -1.32
BRCA1-208ENST00000468300 OR2W1Q9Y3N9 320 aa6.82□□□□□ -1.32
BRCA1-208ENST00000468300 PPIAL4AQ9Y536 164 aa6.82□□□□□ -1.32
BRCA1-208ENST00000468300 LRRC30A6NM36 301 aa6.82□□□□□ -1.32
BRCA1-208ENST00000468300 OVOL3O00110 214 aa6.82□□□□□ -1.32
BRCA1-208ENST00000468300 PIGPP57054 158 aa6.82□□□□□ -1.32
BRCA1-208ENST00000468300 IL13RA1P78552 427 aa6.82□□□□□ -1.32
BRCA1-208ENST00000468300 TMEM208Q9BTX3 173 aa6.82□□□□□ -1.32
BRCA1-208ENST00000468300 CCL28Q9NRJ3 127 aa6.82□□□□□ -1.32
BRCA1-208ENST00000468300 SPTBN1Q01082 2364 aaKnown RBP6.82□□□□□ -1.32
BRCA1-208ENST00000468300 CSMD1Q96PZ7 3565 aa6.82□□□□□ -1.32
BRCA1-208ENST00000468300 MPTX1A8MV57 137 aa6.82□□□□□ -1.32
BRCA1-208ENST00000468300 NDUFS7O75251 213 aa6.82□□□□□ -1.32
BRCA1-208ENST00000468300 TAS2R31P59538 309 aa6.82□□□□□ -1.32
BRCA1-208ENST00000468300 LAMTOR1Q6IAA8 161 aa6.82□□□□□ -1.32
BRCA1-208ENST00000468300 IL1F10Q8WWZ1 152 aa6.82□□□□□ -1.32
BRCA1-208ENST00000468300 AGMATQ9BSE5 352 aa6.82□□□□□ -1.32
BRCA1-208ENST00000468300 RAB1BQ9H0U4 201 aa6.82□□□□□ -1.32
BRCA1-208ENST00000468300 RDH8Q9NYR8 311 aa6.82□□□□□ -1.32
BRCA1-208ENST00000468300 TRAV38-1A0A0B4J264 116 aa6.81□□□□□ -1.32
BRCA1-208ENST00000468300 F2RL2O00254 374 aa6.81□□□□□ -1.32
BRCA1-208ENST00000468300 GOSR2O14653 212 aa6.81□□□□□ -1.32
BRCA1-208ENST00000468300 TMPRSS2O15393 492 aa6.81□□□□□ -1.32
BRCA1-208ENST00000468300 MMP23AO75900 390 aa6.81□□□□□ -1.32
BRCA1-208ENST00000468300 CNIH1O95406 144 aa6.81□□□□□ -1.32
BRCA1-208ENST00000468300 IRF2P14316 349 aa6.81□□□□□ -1.32
BRCA1-208ENST00000468300 GZMHP20718 246 aa6.81□□□□□ -1.32
BRCA1-208ENST00000468300 CEACAM6P40199 344 aa6.81□□□□□ -1.32
BRCA1-208ENST00000468300 ZNF134P52741 427 aa6.81□□□□□ -1.32
BRCA1-208ENST00000468300 TMEM187Q14656 261 aa6.81□□□□□ -1.32
BRCA1-208ENST00000468300 PHLDA2Q53GA4 152 aa6.81□□□□□ -1.32
BRCA1-208ENST00000468300 C1orf229Q6ZS94 237 aaPredicted RBP6.81□□□□□ -1.32
BRCA1-208ENST00000468300 BVESQ8NE79 360 aa6.81□□□□□ -1.32
BRCA1-208ENST00000468300 MSI2Q96DH6 328 aaKnown RBP6.81□□□□□ -1.32
BRCA1-208ENST00000468300 GALNT14Q96FL9 552 aa6.81□□□□□ -1.32
BRCA1-208ENST00000468300 TP53RKQ96S44 253 aa6.81□□□□□ -1.32
BRCA1-208ENST00000468300 LAMP3Q9UQV4 416 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms