RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 FOXRED2Q8IWF2 684 aa15.83■□□□□ 0.12
NPHP4-206ENST00000468253 ZBTB34Q8NCN2 500 aa15.83■□□□□ 0.12
NPHP4-206ENST00000468253 TSNAXQ99598 290 aaKnown RBP15.83■□□□□ 0.12
NPHP4-206ENST00000468253 GON7Q9BXV9 100 aa15.83■□□□□ 0.12
NPHP4-206ENST00000468253 SLIRPQ9GZT3 109 aaKnown RBP15.83■□□□□ 0.12
NPHP4-206ENST00000468253 NXF2Q9GZY0 626 aaKnown RBP15.83■□□□□ 0.12
NPHP4-206ENST00000468253 EXTL2Q9UBQ6 330 aa15.83■□□□□ 0.12
NPHP4-206ENST00000468253 MGAM2Q2M2H8 2515 aa15.83■□□□□ 0.12
NPHP4-206ENST00000468253 MEIS3P1A6NDR6 274 aa15.82■□□□□ 0.12
NPHP4-206ENST00000468253 RRHO14718 337 aa15.82■□□□□ 0.12
NPHP4-206ENST00000468253 RGS5O15539 181 aa15.82■□□□□ 0.12
NPHP4-206ENST00000468253 FBXO24O75426 580 aa15.82■□□□□ 0.12
NPHP4-206ENST00000468253 IGLV2-14P01704 120 aa15.82■□□□□ 0.12
NPHP4-206ENST00000468253 HLA-DRB1P01911 266 aa15.82■□□□□ 0.12
NPHP4-206ENST00000468253 CD83Q01151 205 aa15.82■□□□□ 0.12
NPHP4-206ENST00000468253 DDB2Q92466 427 aa15.82■□□□□ 0.12
NPHP4-206ENST00000468253 C5orf30Q96GV9 206 aa15.82■□□□□ 0.12
NPHP4-206ENST00000468253 RBM38Q9H0Z9 239 aaKnown RBP15.82■□□□□ 0.12
NPHP4-206ENST00000468253 SLC35D1Q9NTN3 355 aa15.82■□□□□ 0.12
NPHP4-206ENST00000468253 RBMX2Q9Y388 322 aaKnown RBP15.82■□□□□ 0.12
NPHP4-206ENST00000468253 IGKV1D-13A0A0B4J2D9 117 aa15.81■□□□□ 0.12
NPHP4-206ENST00000468253 SPDEFO95238 335 aa15.81■□□□□ 0.12
NPHP4-206ENST00000468253 PPYP01298 95 aa15.81■□□□□ 0.12
NPHP4-206ENST00000468253 IGKV1-16P04430 117 aa15.81■□□□□ 0.12
NPHP4-206ENST00000468253 IGF1P05019 195 aa15.81■□□□□ 0.12
NPHP4-206ENST00000468253 IGKV1-13P0DP09 117 aa15.81■□□□□ 0.12
NPHP4-206ENST00000468253 AADACP22760 399 aa15.81■□□□□ 0.12
NPHP4-206ENST00000468253 RCVRNP35243 200 aa15.81■□□□□ 0.12
NPHP4-206ENST00000468253 RPS16P62249 146 aaKnown RBP15.81■□□□□ 0.12
NPHP4-206ENST00000468253 MRPS10P82664 201 aaKnown RBP15.81■□□□□ 0.12
NPHP4-206ENST00000468253 RTL8BQ17RB0 113 aa15.81■□□□□ 0.12
NPHP4-206ENST00000468253 RBMXL1Q96E39 390 aaKnown RBP15.81■□□□□ 0.12
NPHP4-206ENST00000468253 ABHD1Q96SE0 405 aa15.81■□□□□ 0.12
NPHP4-206ENST00000468253 HSD17B10Q99714 261 aaKnown RBP15.81■□□□□ 0.12
NPHP4-206ENST00000468253 RSL24D1Q9UHA3 163 aaKnown RBP15.81■□□□□ 0.12
NPHP4-206ENST00000468253 LINC01548A6NM66 108 aa15.8■□□□□ 0.12
NPHP4-206ENST00000468253 J3QRK9 145 aa15.8■□□□□ 0.12
NPHP4-206ENST00000468253 CD28P10747 220 aa15.8■□□□□ 0.12
NPHP4-206ENST00000468253 CNTFRP26992 372 aa15.8■□□□□ 0.12
NPHP4-206ENST00000468253 RFX2P48378 723 aa15.8■□□□□ 0.12
NPHP4-206ENST00000468253 CBX3Q13185 183 aa15.8■□□□□ 0.12
NPHP4-206ENST00000468253 EIF4EBP1Q13541 118 aaPredicted RBP15.8■□□□□ 0.12
NPHP4-206ENST00000468253 PSG5Q15238 335 aa15.8■□□□□ 0.12
NPHP4-206ENST00000468253 TMEM177Q53S58 311 aa15.8■□□□□ 0.12
NPHP4-206ENST00000468253 ZNF660Q6AZW8 331 aaPredicted RBP15.8■□□□□ 0.12
NPHP4-206ENST00000468253 ZNF66Q6ZN08 573 aa15.8■□□□□ 0.12
NPHP4-206ENST00000468253 COMMD1Q8N668 190 aa15.8■□□□□ 0.12
NPHP4-206ENST00000468253 OR5H2Q8NGV7 314 aa15.8■□□□□ 0.12
NPHP4-206ENST00000468253 ZNF107Q9UII5 783 aaPredicted RBP15.8■□□□□ 0.12
NPHP4-206ENST00000468253 PRELID3BQ9Y3B1 194 aa15.8■□□□□ 0.12
NPHP4-206ENST00000468253 PKD1L1Q8TDX9 2849 aa15.79■□□□□ 0.12
NPHP4-206ENST00000468253 PSMB11A5LHX3 300 aa15.79■□□□□ 0.12
NPHP4-206ENST00000468253 CCDC160A6NGH7 325 aa15.79■□□□□ 0.12
NPHP4-206ENST00000468253 FCER2P06734 321 aa15.79■□□□□ 0.12
NPHP4-206ENST00000468253 SLC35B1P78383 322 aa15.79■□□□□ 0.12
NPHP4-206ENST00000468253 C2orf68Q2NKX9 166 aa15.79■□□□□ 0.12
NPHP4-206ENST00000468253 NDUFA11Q86Y39 141 aa15.79■□□□□ 0.12
NPHP4-206ENST00000468253 LAX1Q8IWV1 398 aa15.79■□□□□ 0.12
NPHP4-206ENST00000468253 STPG2Q8N412 459 aa15.79■□□□□ 0.12
NPHP4-206ENST00000468253 BVESQ8NE79 360 aa15.79■□□□□ 0.12
NPHP4-206ENST00000468253 OR6F1Q8NGZ6 308 aa15.79■□□□□ 0.12
NPHP4-206ENST00000468253 FCAMRQ8WWV6 532 aa15.79■□□□□ 0.12
NPHP4-206ENST00000468253 BORCS5Q969J3 196 aa15.79■□□□□ 0.12
NPHP4-206ENST00000468253 EHFQ9NZC4 300 aa15.79■□□□□ 0.12
NPHP4-206ENST00000468253 NDUFA13Q9P0J0 144 aa15.79■□□□□ 0.12
NPHP4-206ENST00000468253 MTFP1Q9UDX5 166 aa15.79■□□□□ 0.12
NPHP4-206ENST00000468253 A3GALT2U3KPV4 340 aa15.79■□□□□ 0.12
NPHP4-206ENST00000468253 LINC00473A8K010 186 aa15.78■□□□□ 0.12
NPHP4-206ENST00000468253 PMP2P02689 132 aa15.78■□□□□ 0.12
NPHP4-206ENST00000468253 OPN1MWP04001 364 aa15.78■□□□□ 0.12
NPHP4-206ENST00000468253 OPN1MW2P0DN77 364 aa15.78■□□□□ 0.12
NPHP4-206ENST00000468253 OPN1MW3P0DN78 364 aa15.78■□□□□ 0.12
NPHP4-206ENST00000468253 HLA-DMAP28067 261 aa15.78■□□□□ 0.12
NPHP4-206ENST00000468253 SSBP1Q04837 148 aaKnown RBP15.78■□□□□ 0.12
NPHP4-206ENST00000468253 ACTBL2Q562R1 376 aa15.78■□□□□ 0.12
NPHP4-206ENST00000468253 PYHIN1Q6K0P9 492 aa15.78■□□□□ 0.12
NPHP4-206ENST00000468253 ZNF562Q6V9R5 426 aa15.78■□□□□ 0.12
NPHP4-206ENST00000468253 MFSD4AQ8N468 514 aa15.78■□□□□ 0.12
NPHP4-206ENST00000468253 OR4X2Q8NGF9 303 aa15.78■□□□□ 0.12
NPHP4-206ENST00000468253 MCFD2Q8NI22 146 aa15.78■□□□□ 0.12
NPHP4-206ENST00000468253 DIRAS2Q96HU8 199 aa15.78■□□□□ 0.12
NPHP4-206ENST00000468253 NOL4LQ96MY1 436 aaPredicted RBP15.78■□□□□ 0.12
NPHP4-206ENST00000468253 HSPB9Q9BQS6 159 aa15.78■□□□□ 0.12
NPHP4-206ENST00000468253 SLC5A7Q9GZV3 580 aa15.78■□□□□ 0.12
NPHP4-206ENST00000468253 OR51J1Q9H342 316 aa15.78■□□□□ 0.12
NPHP4-206ENST00000468253 WNK1Q9H4A3 2382 aa15.78■□□□□ 0.12
NPHP4-206ENST00000468253 IGHV7-81A0A0B4J1V7 117 aa15.77■□□□□ 0.12
NPHP4-206ENST00000468253 GABARAPH6UMI1 98 aa15.77■□□□□ 0.12
NPHP4-206ENST00000468253 CTDSPLO15194 276 aa15.77■□□□□ 0.12
NPHP4-206ENST00000468253 HRH1P35367 487 aa15.77■□□□□ 0.12
NPHP4-206ENST00000468253 TCTEX1D4Q5JR98 221 aa15.77■□□□□ 0.12
NPHP4-206ENST00000468253 VAX1Q5SQQ9 334 aa15.77■□□□□ 0.12
NPHP4-206ENST00000468253 C11orf44Q8N8P7 122 aa15.77■□□□□ 0.12
NPHP4-206ENST00000468253 OR52I2Q8NH67 350 aa15.77■□□□□ 0.12
NPHP4-206ENST00000468253 OSR1Q8TAX0 266 aaPredicted RBP15.77■□□□□ 0.12
NPHP4-206ENST00000468253 SECTM1Q8WVN6 248 aa15.77■□□□□ 0.12
NPHP4-206ENST00000468253 MOB3AQ96BX8 217 aa15.77■□□□□ 0.12
NPHP4-206ENST00000468253 DGCR14Q96DF8 476 aaKnown RBP15.77■□□□□ 0.12
NPHP4-206ENST00000468253 CITED2Q99967 270 aaPredicted RBP15.77■□□□□ 0.12
NPHP4-206ENST00000468253 SOSTQ9BQB4 213 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms