RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 ZCCHC24Q8N2G6 241 aaKnown RBP8.4□□□□□ -1.06
MSH5-213ENST00000468136 TMEM252Q8N6L7 170 aa8.4□□□□□ -1.06
MSH5-213ENST00000468136 CT45A3Q8NHU0 189 aa8.4□□□□□ -1.06
MSH5-213ENST00000468136 TMEM186Q96B77 213 aa8.4□□□□□ -1.06
MSH5-213ENST00000468136 GNPNAT1Q96EK6 184 aaPredicted RBP8.4□□□□□ -1.06
MSH5-213ENST00000468136 NEIL1Q96FI4 390 aaPredicted RBP8.4□□□□□ -1.06
MSH5-213ENST00000468136 CLCC1Q96S66 551 aa8.4□□□□□ -1.06
MSH5-213ENST00000468136 GINS3Q9BRX5 216 aa8.4□□□□□ -1.06
MSH5-213ENST00000468136 PCGF1Q9BSM1 259 aa8.4□□□□□ -1.06
MSH5-213ENST00000468136 KLF2Q9Y5W3 355 aaPredicted RBP8.4□□□□□ -1.06
MSH5-213ENST00000468136 DSCAMO60469 2012 aa8.4□□□□□ -1.06
MSH5-213ENST00000468136 ARFGEF3Q5TH69 2177 aa8.39□□□□□ -1.07
MSH5-213ENST00000468136 RAB19A4D1S5 217 aa8.39□□□□□ -1.07
MSH5-213ENST00000468136 MARCH11A6NNE9 402 aa8.39□□□□□ -1.07
MSH5-213ENST00000468136 C17orf98A8MV24 154 aa8.39□□□□□ -1.07
MSH5-213ENST00000468136 KIAA1324LA8MWY0 1029 aaPredicted RBP8.39□□□□□ -1.07
MSH5-213ENST00000468136 LEUTXA8MZ59 168 aa8.39□□□□□ -1.07
MSH5-213ENST00000468136 UMAD1C9J7I0 102 aa8.39□□□□□ -1.07
MSH5-213ENST00000468136 TRIM77I1YAP6 450 aa8.39□□□□□ -1.07
MSH5-213ENST00000468136 SOX15O60248 233 aa8.39□□□□□ -1.07
MSH5-213ENST00000468136 APOA2P02652 100 aa8.39□□□□□ -1.07
MSH5-213ENST00000468136 FGF2P09038 288 aa8.39□□□□□ -1.07
MSH5-213ENST00000468136 SELLP14151 372 aa8.39□□□□□ -1.07
MSH5-213ENST00000468136 NFYBP25208 207 aa8.39□□□□□ -1.07
MSH5-213ENST00000468136 SULT1A1P50225 295 aa8.39□□□□□ -1.07
MSH5-213ENST00000468136 SULT1A2P50226 295 aa8.39□□□□□ -1.07
MSH5-213ENST00000468136 ZNF137PP52743 207 aa8.39□□□□□ -1.07
MSH5-213ENST00000468136 HOXA4Q00056 320 aaPredicted RBP8.39□□□□□ -1.07
MSH5-213ENST00000468136 TNFRSF9Q07011 255 aa8.39□□□□□ -1.07
MSH5-213ENST00000468136 CDSNQ15517 529 aa8.39□□□□□ -1.07
MSH5-213ENST00000468136 LTC4SQ16873 150 aa8.39□□□□□ -1.07
MSH5-213ENST00000468136 PDLIM3Q53GG5 364 aaPredicted RBP8.39□□□□□ -1.07
MSH5-213ENST00000468136 UQCC3Q6UW78 93 aa8.39□□□□□ -1.07
MSH5-213ENST00000468136 COMMD7Q86VX2 200 aa8.39□□□□□ -1.07
MSH5-213ENST00000468136 PUSL1Q8N0Z8 303 aaKnown RBP8.39□□□□□ -1.07
MSH5-213ENST00000468136 OR1S2Q8NGQ3 325 aa8.39□□□□□ -1.07
MSH5-213ENST00000468136 OR9G1Q8NH87 305 aa8.39□□□□□ -1.07
MSH5-213ENST00000468136 DDB2Q92466 427 aa8.39□□□□□ -1.07
MSH5-213ENST00000468136 R3HDM4Q96D70 268 aa8.39□□□□□ -1.07
MSH5-213ENST00000468136 TSNAXQ99598 290 aaKnown RBP8.39□□□□□ -1.07
MSH5-213ENST00000468136 PARD6GQ9BYG4 376 aaPredicted RBP8.39□□□□□ -1.07
MSH5-213ENST00000468136 C19orf12Q9NSK7 152 aa8.39□□□□□ -1.07
MSH5-213ENST00000468136 DCAF16Q9NXF7 216 aa8.39□□□□□ -1.07
MSH5-213ENST00000468136 FKBP11Q9NYL4 201 aa8.39□□□□□ -1.07
MSH5-213ENST00000468136 STRAPQ9Y3F4 350 aaKnown RBP8.39□□□□□ -1.07
MSH5-213ENST00000468136 DIDO1Q9BTC0 2240 aaKnown RBP8.39□□□□□ -1.07
MSH5-213ENST00000468136 TPRP12270 2363 aaKnown RBP8.39□□□□□ -1.07
MSH5-213ENST00000468136 COL6A6A6NMZ7 2263 aa8.38□□□□□ -1.07
MSH5-213ENST00000468136 HCFC1P51610 2035 aa8.38□□□□□ -1.07
MSH5-213ENST00000468136 A0A0G2JRQ6 117 aa8.38□□□□□ -1.07
MSH5-213ENST00000468136 LINC00473A8K010 186 aa8.38□□□□□ -1.07
MSH5-213ENST00000468136 B8ZZF3 427 aa8.38□□□□□ -1.07
MSH5-213ENST00000468136 TEX46H3BTG2 121 aa8.38□□□□□ -1.07
MSH5-213ENST00000468136 TXNL1O43396 289 aa8.38□□□□□ -1.07
MSH5-213ENST00000468136 FCGR3BO75015 233 aa8.38□□□□□ -1.07
MSH5-213ENST00000468136 S1PR2O95136 353 aa8.38□□□□□ -1.07
MSH5-213ENST00000468136 KRASP01116 189 aa8.38□□□□□ -1.07
MSH5-213ENST00000468136 IFNA5P01569 189 aa8.38□□□□□ -1.07
MSH5-213ENST00000468136 OR8U8P0C7N1 319 aa8.38□□□□□ -1.07
MSH5-213ENST00000468136 EPHA1P21709 976 aa8.38□□□□□ -1.07
MSH5-213ENST00000468136 OMGP23515 440 aa8.38□□□□□ -1.07
MSH5-213ENST00000468136 RAB13P51153 203 aa8.38□□□□□ -1.07
MSH5-213ENST00000468136 ZNF134P52741 427 aa8.38□□□□□ -1.07
MSH5-213ENST00000468136 PRRX1P54821 245 aa8.38□□□□□ -1.07
MSH5-213ENST00000468136 SPCS3P61009 180 aa8.38□□□□□ -1.07
MSH5-213ENST00000468136 UBE2KP61086 200 aa8.38□□□□□ -1.07
MSH5-213ENST00000468136 ZNF816Q0VGE8 651 aaPredicted RBP8.38□□□□□ -1.07
MSH5-213ENST00000468136 NCR3LG1Q68D85 454 aa8.38□□□□□ -1.07
MSH5-213ENST00000468136 RPL7L1Q6DKI1 246 aaKnown RBP8.38□□□□□ -1.07
MSH5-213ENST00000468136 ZNF833PQ6ZTB9 187 aa8.38□□□□□ -1.07
MSH5-213ENST00000468136 ZNF429Q86V71 674 aa8.38□□□□□ -1.07
MSH5-213ENST00000468136 LYG1Q8N1E2 194 aa8.38□□□□□ -1.07
MSH5-213ENST00000468136 COMMD1Q8N668 190 aa8.38□□□□□ -1.07
MSH5-213ENST00000468136 OR4A16Q8NH70 328 aa8.38□□□□□ -1.07
MSH5-213ENST00000468136 OSR1Q8TAX0 266 aaPredicted RBP8.38□□□□□ -1.07
MSH5-213ENST00000468136 H1FXQ92522 213 aaKnown RBP8.38□□□□□ -1.07
MSH5-213ENST00000468136 C5orf30Q96GV9 206 aa8.38□□□□□ -1.07
MSH5-213ENST00000468136 GPHA2Q96T91 129 aa8.38□□□□□ -1.07
MSH5-213ENST00000468136 PSENENQ9NZ42 101 aa8.38□□□□□ -1.07
MSH5-213ENST00000468136 SAA2-SAA4A0A096LPE2 208 aa8.37□□□□□ -1.07
MSH5-213ENST00000468136 ANKRD34BA5PLL1 514 aa8.37□□□□□ -1.07
MSH5-213ENST00000468136 FAM24AA6NFZ4 105 aa8.37□□□□□ -1.07
MSH5-213ENST00000468136 A6NNC1 897 aa8.37□□□□□ -1.07
MSH5-213ENST00000468136 KRBOX1C9JBD0 128 aa8.37□□□□□ -1.07
MSH5-213ENST00000468136 RAMP3O60896 148 aa8.37□□□□□ -1.07
MSH5-213ENST00000468136 PROP1O75360 226 aa8.37□□□□□ -1.07
MSH5-213ENST00000468136 F12P00748 615 aaPredicted RBP8.37□□□□□ -1.07
MSH5-213ENST00000468136 SAA2P0DJI9 122 aaPredicted RBP8.37□□□□□ -1.07
MSH5-213ENST00000468136 SPP1P10451 314 aa8.37□□□□□ -1.07
MSH5-213ENST00000468136 COL8A2P25067 703 aa8.37□□□□□ -1.07
MSH5-213ENST00000468136 MC5RP33032 325 aa8.37□□□□□ -1.07
MSH5-213ENST00000468136 G6PCP35575 357 aa8.37□□□□□ -1.07
MSH5-213ENST00000468136 EFNA4P52798 201 aa8.37□□□□□ -1.07
MSH5-213ENST00000468136 DLX6P56179 175 aa8.37□□□□□ -1.07
MSH5-213ENST00000468136 ZNF273Q14593 569 aa8.37□□□□□ -1.07
MSH5-213ENST00000468136 PRAMEF5Q5TYX0 476 aa8.37□□□□□ -1.07
MSH5-213ENST00000468136 DUX4L9Q6RFH8 374 aaPredicted RBP8.37□□□□□ -1.07
MSH5-213ENST00000468136 BTNL3Q6UXE8 466 aa8.37□□□□□ -1.07
MSH5-213ENST00000468136 DPPA3Q6W0C5 159 aa8.37□□□□□ -1.07
MSH5-213ENST00000468136 IL34Q6ZMJ4 242 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms