RNA–Protein interactions for RNA: ENST00000468018.5

ATG4B-215, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-215ENST00000468018 THBS3P49746 956 aa11.86□□□□□ -0.51
ATG4B-215ENST00000468018 LSM3P62310 102 aaKnown RBP11.86□□□□□ -0.51
ATG4B-215ENST00000468018 KIAA0141Q14154 515 aaPredicted RBP11.86□□□□□ -0.51
ATG4B-215ENST00000468018 PDLIM3Q53GG5 364 aaPredicted RBP11.86□□□□□ -0.51
ATG4B-215ENST00000468018 KHDC1LQ5JSQ8 128 aa11.86□□□□□ -0.51
ATG4B-215ENST00000468018 ZNF660Q6AZW8 331 aaPredicted RBP11.86□□□□□ -0.51
ATG4B-215ENST00000468018 LINC00482Q8N8I6 264 aa11.86□□□□□ -0.51
ATG4B-215ENST00000468018 MINDY2Q8NBR6 621 aa11.86□□□□□ -0.51
ATG4B-215ENST00000468018 P2RX4Q99571 388 aa11.86□□□□□ -0.51
ATG4B-215ENST00000468018 GINS4Q9BRT9 223 aa11.86□□□□□ -0.51
ATG4B-215ENST00000468018 ST6GALNAC5Q9BVH7 336 aa11.86□□□□□ -0.51
ATG4B-215ENST00000468018 AUNIPQ9H7T9 357 aa11.86□□□□□ -0.51
ATG4B-215ENST00000468018 OR2W1Q9Y3N9 320 aa11.86□□□□□ -0.51
ATG4B-215ENST00000468018 G3V318 75 aa11.85□□□□□ -0.51
ATG4B-215ENST00000468018 FCN1O00602 326 aa11.85□□□□□ -0.51
ATG4B-215ENST00000468018 XRCC3O43542 346 aa11.85□□□□□ -0.51
ATG4B-215ENST00000468018 APOA2P02652 100 aa11.85□□□□□ -0.51
ATG4B-215ENST00000468018 CRYGBP07316 175 aa11.85□□□□□ -0.51
ATG4B-215ENST00000468018 EGR2P11161 476 aaPredicted RBP11.85□□□□□ -0.51
ATG4B-215ENST00000468018 VDAC1P21796 283 aa11.85□□□□□ -0.51
ATG4B-215ENST00000468018 CDX1P47902 265 aaPredicted RBP11.85□□□□□ -0.51
ATG4B-215ENST00000468018 NCS1P62166 190 aa11.85□□□□□ -0.51
ATG4B-215ENST00000468018 SSBP2P81877 361 aaPredicted RBP11.85□□□□□ -0.51
ATG4B-215ENST00000468018 TAGLNQ01995 201 aaKnown RBP11.85□□□□□ -0.51
ATG4B-215ENST00000468018 PSG5Q15238 335 aa11.85□□□□□ -0.51
ATG4B-215ENST00000468018 OXLD1Q5BKU9 147 aa11.85□□□□□ -0.51
ATG4B-215ENST00000468018 HOGA1Q86XE5 327 aa11.85□□□□□ -0.51
ATG4B-215ENST00000468018 KCTD12Q96CX2 325 aaKnown RBP11.85□□□□□ -0.51
ATG4B-215ENST00000468018 DIABLOQ9NR28 239 aa11.85□□□□□ -0.51
ATG4B-215ENST00000468018 SLC35D1Q9NTN3 355 aa11.85□□□□□ -0.51
ATG4B-215ENST00000468018 IGKV1D-13A0A0B4J2D9 117 aa11.84□□□□□ -0.51
ATG4B-215ENST00000468018 GABARAPO95166 117 aa11.84□□□□□ -0.51
ATG4B-215ENST00000468018 PF4P02776 101 aa11.84□□□□□ -0.51
ATG4B-215ENST00000468018 IGKV1-13P0DP09 117 aa11.84□□□□□ -0.51
ATG4B-215ENST00000468018 CX3CL1P78423 397 aa11.84□□□□□ -0.51
ATG4B-215ENST00000468018 EIF4EBP1Q13541 118 aaPredicted RBP11.84□□□□□ -0.51
ATG4B-215ENST00000468018 CTF1Q16619 201 aa11.84□□□□□ -0.51
ATG4B-215ENST00000468018 TMEM177Q53S58 311 aa11.84□□□□□ -0.51
ATG4B-215ENST00000468018 CXorf66Q5JRM2 361 aaPredicted RBP11.84□□□□□ -0.51
ATG4B-215ENST00000468018 UBE2NLQ5JXB2 153 aa11.84□□□□□ -0.51
ATG4B-215ENST00000468018 ZNF562Q6V9R5 426 aa11.84□□□□□ -0.51
ATG4B-215ENST00000468018 LCNL1Q6ZST4 164 aa11.84□□□□□ -0.51
ATG4B-215ENST00000468018 C8orf86Q6ZUL3 223 aa11.84□□□□□ -0.51
ATG4B-215ENST00000468018 ANKRD13BQ86YJ7 626 aa11.84□□□□□ -0.51
ATG4B-215ENST00000468018 ZNF695Q8IW36 515 aa11.84□□□□□ -0.51
ATG4B-215ENST00000468018 MRPL41Q8IXM3 137 aaKnown RBP11.84□□□□□ -0.51
ATG4B-215ENST00000468018 ZNF645Q8N7E2 425 aa11.84□□□□□ -0.51
ATG4B-215ENST00000468018 GVQW1Q8N7I0 195 aa11.84□□□□□ -0.51
ATG4B-215ENST00000468018 FLYWCH2Q96CP2 140 aaKnown RBP11.84□□□□□ -0.51
ATG4B-215ENST00000468018 TSNAXQ99598 290 aaKnown RBP11.84□□□□□ -0.51
ATG4B-215ENST00000468018 METTL1Q9UBP6 276 aaKnown RBP11.84□□□□□ -0.51
ATG4B-215ENST00000468018 ANAPC10Q9UM13 185 aa11.84□□□□□ -0.51
ATG4B-215ENST00000468018 NUBP2Q9Y5Y2 271 aa11.84□□□□□ -0.51
ATG4B-215ENST00000468018 TRAV41A0A0B4J266 112 aa11.83□□□□□ -0.52
ATG4B-215ENST00000468018 LINC00473A8K010 186 aa11.83□□□□□ -0.52
ATG4B-215ENST00000468018 PTHLHP12272 177 aa11.83□□□□□ -0.52
ATG4B-215ENST00000468018 CD33P20138 364 aa11.83□□□□□ -0.52
ATG4B-215ENST00000468018 NFYAP23511 347 aaPredicted RBP11.83□□□□□ -0.52
ATG4B-215ENST00000468018 MYCNOSP40205 109 aa11.83□□□□□ -0.52
ATG4B-215ENST00000468018 LGALS7P47929 136 aa11.83□□□□□ -0.52
ATG4B-215ENST00000468018 VBP1P61758 197 aa11.83□□□□□ -0.52
ATG4B-215ENST00000468018 MRGPRG-AS1Q2M3A8 158 aa11.83□□□□□ -0.52
ATG4B-215ENST00000468018 TCTEX1D1Q8N7M0 179 aa11.83□□□□□ -0.52
ATG4B-215ENST00000468018 KLHL30-AS1Q8NEE0 82 aa11.83□□□□□ -0.52
ATG4B-215ENST00000468018 BEST4Q8NFU0 473 aa11.83□□□□□ -0.52
ATG4B-215ENST00000468018 SNAPC3Q92966 411 aa11.83□□□□□ -0.52
ATG4B-215ENST00000468018 ADTRPQ96IZ2 230 aa11.83□□□□□ -0.52
ATG4B-215ENST00000468018 CMTM3Q96MX0 182 aa11.83□□□□□ -0.52
ATG4B-215ENST00000468018 PARP11Q9NR21 331 aa11.83□□□□□ -0.52
ATG4B-215ENST00000468018 TPSG1Q9NRR2 321 aa11.83□□□□□ -0.52
ATG4B-215ENST00000468018 SRRM4A7MD48 611 aaKnown RBP11.82□□□□□ -0.52
ATG4B-215ENST00000468018 SOX15O60248 233 aa11.82□□□□□ -0.52
ATG4B-215ENST00000468018 RRASP10301 218 aa11.82□□□□□ -0.52
ATG4B-215ENST00000468018 ALDH3B2P48448 385 aa11.82□□□□□ -0.52
ATG4B-215ENST00000468018 LUMP51884 338 aaPredicted RBP11.82□□□□□ -0.52
ATG4B-215ENST00000468018 RPS16P62249 146 aaKnown RBP11.82□□□□□ -0.52
ATG4B-215ENST00000468018 FHL3Q13643 280 aa11.82□□□□□ -0.52
ATG4B-215ENST00000468018 OVCH2Q7RTZ1 564 aa11.82□□□□□ -0.52
ATG4B-215ENST00000468018 SAMD12Q8N8I0 201 aa11.82□□□□□ -0.52
ATG4B-215ENST00000468018 S100A16Q96FQ6 103 aaKnown RBP11.82□□□□□ -0.52
ATG4B-215ENST00000468018 RCC1LQ96I51 464 aaKnown RBP11.82□□□□□ -0.52
ATG4B-215ENST00000468018 RAX2Q96IS3 184 aa11.82□□□□□ -0.52
ATG4B-215ENST00000468018 NAA50Q9GZZ1 169 aaKnown RBP11.82□□□□□ -0.52
ATG4B-215ENST00000468018 KLK15Q9H2R5 256 aa11.82□□□□□ -0.52
ATG4B-215ENST00000468018 RBM7Q9Y580 266 aaKnown RBP11.82□□□□□ -0.52
ATG4B-215ENST00000468018 WSB1Q9Y6I7 421 aa11.82□□□□□ -0.52
ATG4B-215ENST00000468018 ARPC1BO15143 372 aaKnown RBP11.81□□□□□ -0.52
ATG4B-215ENST00000468018 SLC25A17O43808 307 aa11.81□□□□□ -0.52
ATG4B-215ENST00000468018 SLC22A5O76082 557 aa11.81□□□□□ -0.52
ATG4B-215ENST00000468018 DUS4LO95620 317 aaKnown RBP11.81□□□□□ -0.52
ATG4B-215ENST00000468018 CA2P00918 260 aa11.81□□□□□ -0.52
ATG4B-215ENST00000468018 IGLL1P15814 213 aa11.81□□□□□ -0.52
ATG4B-215ENST00000468018 CBX5P45973 191 aa11.81□□□□□ -0.52
ATG4B-215ENST00000468018 MSMO1Q15800 293 aa11.81□□□□□ -0.52
ATG4B-215ENST00000468018 AKIRIN2Q53H80 203 aa11.81□□□□□ -0.52
ATG4B-215ENST00000468018 PPP1R27Q86WC6 154 aa11.81□□□□□ -0.52
ATG4B-215ENST00000468018 ZNF491Q8N8L2 437 aa11.81□□□□□ -0.52
ATG4B-215ENST00000468018 BVESQ8NE79 360 aa11.81□□□□□ -0.52
ATG4B-215ENST00000468018 C4orf3Q8WVX3 66 aa11.81□□□□□ -0.52
ATG4B-215ENST00000468018 UBE2E2Q96LR5 201 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms