RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 PTGES3LE9PB15 166 aa13.22□□□□□ -0.29
TRIM56-203ENST00000467847 H3BUA1 57 aa13.22□□□□□ -0.29
TRIM56-203ENST00000467847 M0R1X1 148 aa13.22□□□□□ -0.29
TRIM56-203ENST00000467847 MED22Q15528 200 aa13.22□□□□□ -0.29
TRIM56-203ENST00000467847 ZFAND6Q6FIF0 208 aa13.22□□□□□ -0.29
TRIM56-203ENST00000467847 FAM89BQ8N5H3 189 aa13.22□□□□□ -0.29
TRIM56-203ENST00000467847 OR5T1Q8NG75 326 aa13.22□□□□□ -0.29
TRIM56-203ENST00000467847 TMEM203Q969S6 136 aa13.22□□□□□ -0.29
TRIM56-203ENST00000467847 LSM2Q9Y333 95 aaKnown RBP13.22□□□□□ -0.29
TRIM56-203ENST00000467847 IGKV1-6A0A0C4DH72 117 aa13.21□□□□□ -0.29
TRIM56-203ENST00000467847 FOXI3A8MTJ6 420 aaPredicted RBP13.21□□□□□ -0.29
TRIM56-203ENST00000467847 SLC17A2O00624 439 aa13.21□□□□□ -0.29
TRIM56-203ENST00000467847 VEGFCP49767 419 aa13.21□□□□□ -0.29
TRIM56-203ENST00000467847 LIPKQ5VXJ0 399 aa13.21□□□□□ -0.29
TRIM56-203ENST00000467847 ISOC1Q96CN7 298 aa13.21□□□□□ -0.29
TRIM56-203ENST00000467847 ARHGAP5-AS1Q96IT6 56 aa13.21□□□□□ -0.29
TRIM56-203ENST00000467847 GFI1Q99684 422 aa13.21□□□□□ -0.29
TRIM56-203ENST00000467847 CMSS1Q9BQ75 279 aaKnown RBP13.21□□□□□ -0.29
TRIM56-203ENST00000467847 SLC35D1Q9NTN3 355 aa13.21□□□□□ -0.29
TRIM56-203ENST00000467847 C19orf73Q9NVV2 129 aa13.21□□□□□ -0.29
TRIM56-203ENST00000467847 RDH8Q9NYR8 311 aa13.21□□□□□ -0.29
TRIM56-203ENST00000467847 CSMD3Q7Z407 3707 aa13.21□□□□□ -0.29
TRIM56-203ENST00000467847 A8MZ25 164 aa13.2□□□□□ -0.3
TRIM56-203ENST00000467847 TRDCB7Z8K6 153 aa13.2□□□□□ -0.3
TRIM56-203ENST00000467847 TMEM50BP56557 158 aa13.2□□□□□ -0.3
TRIM56-203ENST00000467847 PJVKQ0ZLH3 352 aa13.2□□□□□ -0.3
TRIM56-203ENST00000467847 RAB11BQ15907 218 aa13.2□□□□□ -0.3
TRIM56-203ENST00000467847 MOGAT2Q3SYC2 334 aa13.2□□□□□ -0.3
TRIM56-203ENST00000467847 OGFRL1Q5TC84 451 aaPredicted RBP13.2□□□□□ -0.3
TRIM56-203ENST00000467847 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.2□□□□□ -0.3
TRIM56-203ENST00000467847 OR9G4Q8NGQ1 327 aa13.2□□□□□ -0.3
TRIM56-203ENST00000467847 UFD1Q92890 307 aa13.2□□□□□ -0.3
TRIM56-203ENST00000467847 PECRQ9BY49 303 aa13.2□□□□□ -0.3
TRIM56-203ENST00000467847 STARD9Q9P2P6 4700 aa13.2□□□□□ -0.3
TRIM56-203ENST00000467847 DNAH1Q9P2D7 4330 aa13.19□□□□□ -0.3
TRIM56-203ENST00000467847 IGLV2-23P01705 113 aa13.19□□□□□ -0.3
TRIM56-203ENST00000467847 LGALS7P47929 136 aa13.19□□□□□ -0.3
TRIM56-203ENST00000467847 SSBP2P81877 361 aaPredicted RBP13.19□□□□□ -0.3
TRIM56-203ENST00000467847 KLF5Q13887 457 aaPredicted RBP13.19□□□□□ -0.3
TRIM56-203ENST00000467847 OR56B1Q8NGI3 324 aa13.19□□□□□ -0.3
TRIM56-203ENST00000467847 KRTAP17-1Q9BYP8 105 aa13.19□□□□□ -0.3
TRIM56-203ENST00000467847 AK6Q9Y3D8 172 aaKnown RBP13.19□□□□□ -0.3
TRIM56-203ENST00000467847 H0Y980 276 aa13.18□□□□□ -0.3
TRIM56-203ENST00000467847 SERPINB10P48595 397 aa13.18□□□□□ -0.3
TRIM56-203ENST00000467847 CLDN12P56749 244 aa13.18□□□□□ -0.3
TRIM56-203ENST00000467847 SYNJ2BPP57105 145 aa13.18□□□□□ -0.3
TRIM56-203ENST00000467847 DEFA5Q01523 94 aa13.18□□□□□ -0.3
TRIM56-203ENST00000467847 CBX3Q13185 183 aa13.18□□□□□ -0.3
TRIM56-203ENST00000467847 PLAC9Q5JTB6 97 aa13.18□□□□□ -0.3
TRIM56-203ENST00000467847 TMEM91Q6ZNR0 172 aa13.18□□□□□ -0.3
TRIM56-203ENST00000467847 OR4A4PQ8NGN8 299 aa13.18□□□□□ -0.3
TRIM56-203ENST00000467847 HARBI1Q96MB7 349 aa13.18□□□□□ -0.3
TRIM56-203ENST00000467847 TMEM68Q96MH6 324 aa13.18□□□□□ -0.3
TRIM56-203ENST00000467847 LYSTQ99698 3801 aa13.18□□□□□ -0.3
TRIM56-203ENST00000467847 TINAGL1Q9GZM7 467 aaPredicted RBP13.18□□□□□ -0.3
TRIM56-203ENST00000467847 OR2D2Q9H210 308 aa13.18□□□□□ -0.3
TRIM56-203ENST00000467847 VCXQ9H320 206 aa13.18□□□□□ -0.3
TRIM56-203ENST00000467847 EDA2RQ9HAV5 297 aa13.18□□□□□ -0.3
TRIM56-203ENST00000467847 SCN3BQ9NY72 215 aa13.18□□□□□ -0.3
TRIM56-203ENST00000467847 CASQ2O14958 399 aaPredicted RBP13.17□□□□□ -0.3
TRIM56-203ENST00000467847 BET1O15155 118 aa13.17□□□□□ -0.3
TRIM56-203ENST00000467847 ARL6IP5O75915 188 aa13.17□□□□□ -0.3
TRIM56-203ENST00000467847 CRYGBP07316 175 aa13.17□□□□□ -0.3
TRIM56-203ENST00000467847 HSMCR30P0CW71 290 aa13.17□□□□□ -0.3
TRIM56-203ENST00000467847 AADACP22760 399 aa13.17□□□□□ -0.3
TRIM56-203ENST00000467847 RPS25P62851 125 aaKnown RBP13.17□□□□□ -0.3
TRIM56-203ENST00000467847 MRPS15P82914 257 aaKnown RBP13.17□□□□□ -0.3
TRIM56-203ENST00000467847 IL34Q6ZMJ4 242 aa13.17□□□□□ -0.3
TRIM56-203ENST00000467847 GTSCR1Q86UQ5 136 aa13.17□□□□□ -0.3
TRIM56-203ENST00000467847 FAM3DQ96BQ1 224 aa13.17□□□□□ -0.3
TRIM56-203ENST00000467847 SPATA25Q9BR10 227 aa13.17□□□□□ -0.3
TRIM56-203ENST00000467847 COA4Q9NYJ1 87 aa13.17□□□□□ -0.3
TRIM56-203ENST00000467847 PEF1Q9UBV8 284 aaKnown RBP13.17□□□□□ -0.3
TRIM56-203ENST00000467847 FABP7O15540 132 aa13.16□□□□□ -0.3
TRIM56-203ENST00000467847 DENRO43583 198 aaKnown RBP13.16□□□□□ -0.3
TRIM56-203ENST00000467847 BRI3O95415 125 aa13.16□□□□□ -0.3
TRIM56-203ENST00000467847 CD3GP09693 182 aa13.16□□□□□ -0.3
TRIM56-203ENST00000467847 CALRP27797 417 aaKnown RBP13.16□□□□□ -0.3
TRIM56-203ENST00000467847 IRF3Q14653 427 aa13.16□□□□□ -0.3
TRIM56-203ENST00000467847 TRAM1Q15629 374 aa13.16□□□□□ -0.3
TRIM56-203ENST00000467847 ZNF343Q6P1L6 599 aa13.16□□□□□ -0.3
TRIM56-203ENST00000467847 OR10J5Q8NHC4 309 aa13.16□□□□□ -0.3
TRIM56-203ENST00000467847 PHB2Q99623 299 aa13.16□□□□□ -0.3
TRIM56-203ENST00000467847 SDHAF2Q9NX18 166 aa13.16□□□□□ -0.3
TRIM56-203ENST00000467847 SHOXO15266 292 aa13.15□□□□□ -0.3
TRIM56-203ENST00000467847 TRBV12-3P01733 135 aa13.15□□□□□ -0.3
TRIM56-203ENST00000467847 APELAP0DMC3 54 aa13.15□□□□□ -0.3
TRIM56-203ENST00000467847 PSMA1P25786 263 aaKnown RBP13.15□□□□□ -0.3
TRIM56-203ENST00000467847 TAGLNQ01995 201 aaKnown RBP13.15□□□□□ -0.3
TRIM56-203ENST00000467847 DYRK1AQ13627 763 aa13.15□□□□□ -0.3
TRIM56-203ENST00000467847 TPBGQ13641 420 aa13.15□□□□□ -0.3
TRIM56-203ENST00000467847 HAGHQ16775 308 aa13.15□□□□□ -0.3
TRIM56-203ENST00000467847 TATDN3Q17R31 274 aa13.15□□□□□ -0.3
TRIM56-203ENST00000467847 RTL8BQ17RB0 113 aa13.15□□□□□ -0.3
TRIM56-203ENST00000467847 RPEL1Q2QD12 228 aa13.15□□□□□ -0.3
TRIM56-203ENST00000467847 C2orf76Q3KRA6 126 aa13.15□□□□□ -0.3
TRIM56-203ENST00000467847 IGSF11Q5DX21 431 aa13.15□□□□□ -0.3
TRIM56-203ENST00000467847 LCN12Q6JVE5 192 aa13.15□□□□□ -0.3
TRIM56-203ENST00000467847 BVESQ8NE79 360 aa13.15□□□□□ -0.3
TRIM56-203ENST00000467847 USMG5Q96IX5 58 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms