RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-231	ENST00000467435	UBQLN2	Q9UHD9	624 aa		10.08	□□□□□ -0.8
HDLBP-231	ENST00000467435	PRELID3B	Q9Y3B1	194 aa		10.08	□□□□□ -0.8
HDLBP-231	ENST00000467435	SESN1	Q9Y6P5	492 aa		10.08	□□□□□ -0.8
HDLBP-231	ENST00000467435	DOCK11	Q5JSL3	2073 aa		10.07	□□□□□ -0.8
HDLBP-231	ENST00000467435		A0A087X0M5	115 aa		10.07	□□□□□ -0.8
HDLBP-231	ENST00000467435		A0A1B0GX30	115 aa		10.07	□□□□□ -0.8
HDLBP-231	ENST00000467435	OVOL3	O00110	214 aa		10.07	□□□□□ -0.8
HDLBP-231	ENST00000467435	RBFOX2	O43251	390 aa	Known RBP eCLIP	10.07	□□□□□ -0.8
HDLBP-231	ENST00000467435	GPR137B	O60478	399 aa		10.07	□□□□□ -0.8
HDLBP-231	ENST00000467435	HPRT1	P00492	218 aa		10.07	□□□□□ -0.8
HDLBP-231	ENST00000467435	KRAS	P01116	189 aa		10.07	□□□□□ -0.8
HDLBP-231	ENST00000467435		P0C879	139 aa		10.07	□□□□□ -0.8
HDLBP-231	ENST00000467435	IGHV1-8	P0DP01	117 aa		10.07	□□□□□ -0.8
HDLBP-231	ENST00000467435	RPL12	P30050	165 aa	Known RBP	10.07	□□□□□ -0.8
HDLBP-231	ENST00000467435	HTR2B	P41595	481 aa		10.07	□□□□□ -0.8
HDLBP-231	ENST00000467435	P2RY1	P47900	373 aa		10.07	□□□□□ -0.8
HDLBP-231	ENST00000467435	VAMP2	P63027	116 aa		10.07	□□□□□ -0.8
HDLBP-231	ENST00000467435	ID3	Q02535	119 aa		10.07	□□□□□ -0.8
HDLBP-231	ENST00000467435	SRSF1	Q07955	248 aa	Known RBP eCLIP	10.07	□□□□□ -0.8
HDLBP-231	ENST00000467435	NDUFA5	Q16718	116 aa		10.07	□□□□□ -0.8
HDLBP-231	ENST00000467435		Q6ZRM9	215 aa		10.07	□□□□□ -0.8
HDLBP-231	ENST00000467435	OR4S2	Q8NH73	311 aa		10.07	□□□□□ -0.8
HDLBP-231	ENST00000467435	ST8SIA2	Q92186	375 aa		10.07	□□□□□ -0.8
HDLBP-231	ENST00000467435	R3HDM4	Q96D70	268 aa		10.07	□□□□□ -0.8
HDLBP-231	ENST00000467435	CCL19	Q99731	98 aa		10.07	□□□□□ -0.8
HDLBP-231	ENST00000467435	SSBP3	Q9BWW4	388 aa	Predicted RBP	10.07	□□□□□ -0.8
HDLBP-231	ENST00000467435	C11orf1	Q9H5F2	150 aa		10.07	□□□□□ -0.8
HDLBP-231	ENST00000467435	SPTBN1	Q01082	2364 aa	Known RBP	10.06	□□□□□ -0.8
HDLBP-231	ENST00000467435	PPIAL4C	A0A0B4J2A2	164 aa		10.06	□□□□□ -0.8
HDLBP-231	ENST00000467435	C22orf46	C9J442	243 aa		10.06	□□□□□ -0.8
HDLBP-231	ENST00000467435		J3QR06	171 aa		10.06	□□□□□ -0.8
HDLBP-231	ENST00000467435	ATP6V1G1	O75348	118 aa		10.06	□□□□□ -0.8
HDLBP-231	ENST00000467435	RBP4	P02753	201 aa		10.06	□□□□□ -0.8
HDLBP-231	ENST00000467435	PPIAL4G	P0DN37	164 aa		10.06	□□□□□ -0.8
HDLBP-231	ENST00000467435	MMP9	P14780	707 aa		10.06	□□□□□ -0.8
HDLBP-231	ENST00000467435	ZNF833P	Q6ZTB9	187 aa		10.06	□□□□□ -0.8
HDLBP-231	ENST00000467435	H2BFWT	Q7Z2G1	175 aa		10.06	□□□□□ -0.8
HDLBP-231	ENST00000467435	LINC00311	Q8N616	119 aa		10.06	□□□□□ -0.8
HDLBP-231	ENST00000467435	C8orf31	Q8N9H6	132 aa		10.06	□□□□□ -0.8
HDLBP-231	ENST00000467435	ZNF383	Q8NA42	475 aa		10.06	□□□□□ -0.8
HDLBP-231	ENST00000467435	OR10X1	Q8NGY0	326 aa		10.06	□□□□□ -0.8
HDLBP-231	ENST00000467435	OR9G1	Q8NH87	305 aa		10.06	□□□□□ -0.8
HDLBP-231	ENST00000467435	ZNF596	Q8TC21	504 aa		10.06	□□□□□ -0.8
HDLBP-231	ENST00000467435	IGFBPL1	Q8WX77	278 aa		10.06	□□□□□ -0.8
HDLBP-231	ENST00000467435	TMEM133	Q9H2Q1	129 aa		10.06	□□□□□ -0.8
HDLBP-231	ENST00000467435	COA4	Q9NYJ1	87 aa		10.06	□□□□□ -0.8
HDLBP-231	ENST00000467435	ABCA4	P78363	2273 aa		10.06	□□□□□ -0.8
HDLBP-231	ENST00000467435	HRNR	Q86YZ3	2850 aa	Predicted RBP	10.06	□□□□□ -0.8
HDLBP-231	ENST00000467435	MARCH11	A6NNE9	402 aa		10.05	□□□□□ -0.8
HDLBP-231	ENST00000467435	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	10.05	□□□□□ -0.8
HDLBP-231	ENST00000467435	IGHV4-39	P01824	125 aa		10.05	□□□□□ -0.8
HDLBP-231	ENST00000467435	LIPF	P07098	398 aa		10.05	□□□□□ -0.8
HDLBP-231	ENST00000467435	COX6B1	P14854	86 aa		10.05	□□□□□ -0.8
HDLBP-231	ENST00000467435	ERVK-16	P61578	105 aa		10.05	□□□□□ -0.8
HDLBP-231	ENST00000467435	MIDN	Q504T8	468 aa		10.05	□□□□□ -0.8
HDLBP-231	ENST00000467435	GPR157	Q5UAW9	335 aa		10.05	□□□□□ -0.8
HDLBP-231	ENST00000467435	FAM71F2	Q6NXP2	309 aa		10.05	□□□□□ -0.8
HDLBP-231	ENST00000467435	ALKAL2	Q6UX46	152 aa		10.05	□□□□□ -0.8
HDLBP-231	ENST00000467435	OR8H3	Q8N146	312 aa		10.05	□□□□□ -0.8
HDLBP-231	ENST00000467435	C11orf42	Q8N5U0	333 aa		10.05	□□□□□ -0.8
HDLBP-231	ENST00000467435	OR2C3	Q8N628	320 aa		10.05	□□□□□ -0.8
HDLBP-231	ENST00000467435	ZNF525	Q8N782	197 aa		10.05	□□□□□ -0.8
HDLBP-231	ENST00000467435	LY6G5B	Q8NDX9	201 aa		10.05	□□□□□ -0.8
HDLBP-231	ENST00000467435	STOML3	Q8TAV4	291 aa		10.05	□□□□□ -0.8
HDLBP-231	ENST00000467435	SCARB1	Q8WTV0	552 aa		10.05	□□□□□ -0.8
HDLBP-231	ENST00000467435	ONECUT1	Q9UBC0	465 aa		10.05	□□□□□ -0.8
HDLBP-231	ENST00000467435	FBXL17	Q9UF56	701 aa		10.05	□□□□□ -0.8
HDLBP-231	ENST00000467435	hCG_1809904	A0A1W2PP81	198 aa		10.04	□□□□□ -0.8
HDLBP-231	ENST00000467435		A0A1W2PPE2	198 aa		10.04	□□□□□ -0.8
HDLBP-231	ENST00000467435		A0A1W2PR64	198 aa		10.04	□□□□□ -0.8
HDLBP-231	ENST00000467435		A0A1W2PRV1	198 aa		10.04	□□□□□ -0.8
HDLBP-231	ENST00000467435	IGSF23	A1L1A6	192 aa		10.04	□□□□□ -0.8
HDLBP-231	ENST00000467435	FAM90A26	D6RGX4	464 aa		10.04	□□□□□ -0.8
HDLBP-231	ENST00000467435	TOR1A	O14656	332 aa		10.04	□□□□□ -0.8
HDLBP-231	ENST00000467435	TAAR5	O14804	337 aa		10.04	□□□□□ -0.8
HDLBP-231	ENST00000467435	CRYZL1	O95825	349 aa		10.04	□□□□□ -0.8
HDLBP-231	ENST00000467435	TPT1	P13693	172 aa	Known RBP	10.04	□□□□□ -0.8
HDLBP-231	ENST00000467435	IL3RA	P26951	378 aa		10.04	□□□□□ -0.8
HDLBP-231	ENST00000467435	CAV2	P51636	162 aa		10.04	□□□□□ -0.8
HDLBP-231	ENST00000467435	EWSR1	Q01844	656 aa	Known RBP eCLIP	10.04	□□□□□ -0.8
HDLBP-231	ENST00000467435	ABHD12	Q8N2K0	398 aa		10.04	□□□□□ -0.8
HDLBP-231	ENST00000467435	TMEM186	Q96B77	213 aa		10.04	□□□□□ -0.8
HDLBP-231	ENST00000467435	MRPL20	Q9BYC9	149 aa	Known RBP	10.04	□□□□□ -0.8
HDLBP-231	ENST00000467435	SMIM3	Q9BZL3	60 aa		10.04	□□□□□ -0.8
HDLBP-231	ENST00000467435	CYTL1	Q9NRR1	136 aa		10.04	□□□□□ -0.8
HDLBP-231	ENST00000467435	SLC35D1	Q9NTN3	355 aa		10.04	□□□□□ -0.8
HDLBP-231	ENST00000467435	LYRM2	Q9NU23	88 aa	Predicted RBP	10.04	□□□□□ -0.8
HDLBP-231	ENST00000467435	USF3	Q68DE3	2245 aa		10.03	□□□□□ -0.8
HDLBP-231	ENST00000467435	LOC105371242	A0A075B767	164 aa		10.03	□□□□□ -0.8
HDLBP-231	ENST00000467435	IGHV2-26	A0A0B4J1V2	119 aa		10.03	□□□□□ -0.8
HDLBP-231	ENST00000467435	RPS10-NUDT3	A0A1W2PQS6	291 aa		10.03	□□□□□ -0.8
HDLBP-231	ENST00000467435		A1L4Q6	167 aa		10.03	□□□□□ -0.8
HDLBP-231	ENST00000467435	FAM24A	A6NFZ4	105 aa		10.03	□□□□□ -0.8
HDLBP-231	ENST00000467435	SYNGR2	O43760	224 aa		10.03	□□□□□ -0.8
HDLBP-231	ENST00000467435	CHST1	O43916	411 aa		10.03	□□□□□ -0.8
HDLBP-231	ENST00000467435	IGHV2-5	P01817	119 aa		10.03	□□□□□ -0.8
HDLBP-231	ENST00000467435	APOA2	P02652	100 aa		10.03	□□□□□ -0.8
HDLBP-231	ENST00000467435	CT45A6	P0DMU7	189 aa		10.03	□□□□□ -0.8
HDLBP-231	ENST00000467435	CT45A5	P0DMU8	189 aa		10.03	□□□□□ -0.8
HDLBP-231	ENST00000467435	CT45A7	P0DMV0	189 aa		10.03	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms