RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 KIAA0040Q15053 153 aa2.59□□□□□ -1.99
VPS50-209ENST00000467326 KCNJ8Q15842 424 aa2.59□□□□□ -1.99
VPS50-209ENST00000467326 RSPO1Q2MKA7 263 aaPredicted RBP2.59□□□□□ -1.99
VPS50-209ENST00000467326 IBA57Q5T440 356 aaKnown RBP2.59□□□□□ -1.99
VPS50-209ENST00000467326 DNAJC24Q6P3W2 148 aa2.59□□□□□ -1.99
VPS50-209ENST00000467326 AGTRAPQ6RW13 159 aa2.59□□□□□ -1.99
VPS50-209ENST00000467326 ACP7Q6ZNF0 438 aa2.59□□□□□ -1.99
VPS50-209ENST00000467326 CROCCP2Q86T23 111 aa2.59□□□□□ -1.99
VPS50-209ENST00000467326 OSR2Q8N2R0 312 aa2.59□□□□□ -1.99
VPS50-209ENST00000467326 LRRC18Q8N456 261 aa2.59□□□□□ -1.99
VPS50-209ENST00000467326 ST6GALNAC3Q8NDV1 305 aa2.59□□□□□ -1.99
VPS50-209ENST00000467326 LY6G5BQ8NDX9 201 aa2.59□□□□□ -1.99
VPS50-209ENST00000467326 GHSRQ92847 366 aa2.59□□□□□ -1.99
VPS50-209ENST00000467326 PTX4Q96A99 478 aa2.59□□□□□ -1.99
VPS50-209ENST00000467326 APOBEC3DQ96AK3 386 aaPredicted RBP2.59□□□□□ -1.99
VPS50-209ENST00000467326 RPUSD4Q96CM3 377 aaKnown RBP2.59□□□□□ -1.99
VPS50-209ENST00000467326 FXYD5Q96DB9 178 aa2.59□□□□□ -1.99
VPS50-209ENST00000467326 MS4A6EQ96DS6 147 aa2.59□□□□□ -1.99
VPS50-209ENST00000467326 L3HYPDHQ96EM0 354 aa2.59□□□□□ -1.99
VPS50-209ENST00000467326 FOPNLQ96NB1 174 aa2.59□□□□□ -1.99
VPS50-209ENST00000467326 CHST6Q9GZX3 395 aa2.59□□□□□ -1.99
VPS50-209ENST00000467326 PBOV1Q9GZY1 135 aa2.59□□□□□ -1.99
VPS50-209ENST00000467326 OR52D1Q9H346 318 aa2.59□□□□□ -1.99
VPS50-209ENST00000467326 CDC42EP4Q9H3Q1 356 aaKnown RBP2.59□□□□□ -1.99
VPS50-209ENST00000467326 WFDC1Q9HC57 220 aa2.59□□□□□ -1.99
VPS50-209ENST00000467326 ZNF331Q9NQX6 463 aaPredicted RBP2.59□□□□□ -1.99
VPS50-209ENST00000467326 MED29Q9NX70 200 aa2.59□□□□□ -1.99
VPS50-209ENST00000467326 LAMTOR3Q9UHA4 124 aa2.59□□□□□ -1.99
VPS50-209ENST00000467326 NEU3Q9UQ49 428 aa2.59□□□□□ -1.99
VPS50-209ENST00000467326 PSG8Q9UQ74 426 aa2.59□□□□□ -1.99
VPS50-209ENST00000467326 BTRCQ9Y297 605 aa2.59□□□□□ -1.99
VPS50-209ENST00000467326 DHX57Q6P158 1386 aaKnown RBP2.59□□□□□ -2
VPS50-209ENST00000467326 IGKV1-27A0A075B6S5 117 aa2.58□□□□□ -2
VPS50-209ENST00000467326 hCG_1818297A0A087WSY0 165 aa2.58□□□□□ -2
VPS50-209ENST00000467326 A8MT66 165 aa2.58□□□□□ -2
VPS50-209ENST00000467326 KRBOX1C9JBD0 128 aa2.58□□□□□ -2
VPS50-209ENST00000467326 H3BSA7 217 aa2.58□□□□□ -2
VPS50-209ENST00000467326 J3KT08 172 aa2.58□□□□□ -2
VPS50-209ENST00000467326 MRASO14807 208 aa2.58□□□□□ -2
VPS50-209ENST00000467326 SCO1O75880 301 aa2.58□□□□□ -2
VPS50-209ENST00000467326 IFNA7P01567 189 aa2.58□□□□□ -2
VPS50-209ENST00000467326 IFNGP01579 166 aa2.58□□□□□ -2
VPS50-209ENST00000467326 GYPCP04921 128 aa2.58□□□□□ -2
VPS50-209ENST00000467326 IFNA4P05014 189 aa2.58□□□□□ -2
VPS50-209ENST00000467326 LGALS1P09382 135 aaKnown RBP2.58□□□□□ -2
VPS50-209ENST00000467326 TSPAN19P0C672 248 aa2.58□□□□□ -2
VPS50-209ENST00000467326 P0C879 139 aa2.58□□□□□ -2
VPS50-209ENST00000467326 CPMP14384 443 aa2.58□□□□□ -2
VPS50-209ENST00000467326 ORM2P19652 201 aa2.58□□□□□ -2
VPS50-209ENST00000467326 PPIBP23284 216 aaKnown RBP2.58□□□□□ -2
VPS50-209ENST00000467326 IL3RAP26951 378 aa2.58□□□□□ -2
VPS50-209ENST00000467326 NUDT2P50583 147 aa2.58□□□□□ -2
VPS50-209ENST00000467326 ZNF83P51522 516 aa2.58□□□□□ -2
VPS50-209ENST00000467326 RPS28P62857 69 aaKnown RBP2.58□□□□□ -2
VPS50-209ENST00000467326 MRPS10P82664 201 aaKnown RBP2.58□□□□□ -2
VPS50-209ENST00000467326 GNA12Q03113 381 aa2.58□□□□□ -2
VPS50-209ENST00000467326 ELOCQ15369 112 aa2.58□□□□□ -2
VPS50-209ENST00000467326 RHEBQ15382 184 aa2.58□□□□□ -2
VPS50-209ENST00000467326 C12orf74Q32Q52 190 aa2.58□□□□□ -2
VPS50-209ENST00000467326 PLPPR5Q32ZL2 321 aa2.58□□□□□ -2
VPS50-209ENST00000467326 C9orf129Q5T035 196 aaKnown RBP2.58□□□□□ -2
VPS50-209ENST00000467326 GUSBP11Q6P575 273 aa2.58□□□□□ -2
VPS50-209ENST00000467326 SHISA6Q6ZSJ9 500 aa2.58□□□□□ -2
VPS50-209ENST00000467326 TCF24Q7RTU0 167 aa2.58□□□□□ -2
VPS50-209ENST00000467326 CAMK2N1Q7Z7J9 78 aa2.58□□□□□ -2
VPS50-209ENST00000467326 LRRC28Q86X40 367 aaPredicted RBP2.58□□□□□ -2
VPS50-209ENST00000467326 CTAGE3PQ8IX95 158 aa2.58□□□□□ -2
VPS50-209ENST00000467326 UMODL1-AS1Q8N2C9 162 aa2.58□□□□□ -2
VPS50-209ENST00000467326 LINC00337Q8N6G1 96 aa2.58□□□□□ -2
VPS50-209ENST00000467326 OR5A1Q8NGJ0 315 aa2.58□□□□□ -2
VPS50-209ENST00000467326 OR2T4Q8NH00 348 aa2.58□□□□□ -2
VPS50-209ENST00000467326 OR2T27Q8NH04 317 aa2.58□□□□□ -2
VPS50-209ENST00000467326 OR52P1PQ8NH57 321 aa2.58□□□□□ -2
VPS50-209ENST00000467326 OR1L1Q8NH94 360 aa2.58□□□□□ -2
VPS50-209ENST00000467326 LINC01006Q8NI28 216 aa2.58□□□□□ -2
VPS50-209ENST00000467326 DCUN1D4Q92564 292 aa2.58□□□□□ -2
VPS50-209ENST00000467326 PPP3R2Q96LZ3 170 aa2.58□□□□□ -2
VPS50-209ENST00000467326 LYSMD1Q96S90 227 aa2.58□□□□□ -2
VPS50-209ENST00000467326 NMNAT3Q96T66 252 aa2.58□□□□□ -2
VPS50-209ENST00000467326 DOHHQ9BU89 302 aa2.58□□□□□ -2
VPS50-209ENST00000467326 GTSF1LQ9H1H1 148 aa2.58□□□□□ -2
VPS50-209ENST00000467326 MED28Q9H204 178 aa2.58□□□□□ -2
VPS50-209ENST00000467326 KCNIP2Q9NS61 270 aa2.58□□□□□ -2
VPS50-209ENST00000467326 MED11Q9P086 117 aa2.58□□□□□ -2
VPS50-209ENST00000467326 DHCR7Q9UBM7 475 aaKnown RBP2.58□□□□□ -2
VPS50-209ENST00000467326 TAC3Q9UHF0 121 aa2.58□□□□□ -2
VPS50-209ENST00000467326 DNAJC12Q9UKB3 198 aa2.58□□□□□ -2
VPS50-209ENST00000467326 RFNGQ9Y644 331 aa2.58□□□□□ -2
VPS50-209ENST00000467326 BRCA1P38398 1863 aaKnown RBP2.58□□□□□ -2
VPS50-209ENST00000467326 A0A1B0GV90 55 aa2.57□□□□□ -2
VPS50-209ENST00000467326 TMEM189A5PLL7 270 aa2.57□□□□□ -2
VPS50-209ENST00000467326 TMEM150BA6NC51 233 aa2.57□□□□□ -2
VPS50-209ENST00000467326 SIGLEC16A6NMB1 481 aa2.57□□□□□ -2
VPS50-209ENST00000467326 INMT-MINDY4F8WBC2 141 aa2.57□□□□□ -2
VPS50-209ENST00000467326 RTL8CO15255 209 aa2.57□□□□□ -2
VPS50-209ENST00000467326 CYB5BO43169 146 aa2.57□□□□□ -2
VPS50-209ENST00000467326 GSTZ1O43708 216 aaPredicted RBP2.57□□□□□ -2
VPS50-209ENST00000467326 DEDDO75618 318 aa2.57□□□□□ -2
VPS50-209ENST00000467326 IGHV3-23P01764 117 aa2.57□□□□□ -2
VPS50-209ENST00000467326 G6PCP35575 357 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms