RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 SLC35G3Q8N808 338 aa10.56□□□□□ -0.72
COL4A1-202ENST00000467182 TCTEX1D2Q8WW35 142 aa10.56□□□□□ -0.72
COL4A1-202ENST00000467182 OR10C1Q96KK4 312 aa10.56□□□□□ -0.72
COL4A1-202ENST00000467182 CHIAQ9BZP6 476 aa10.56□□□□□ -0.72
COL4A1-202ENST00000467182 LPAR2Q9HBW0 351 aa10.56□□□□□ -0.72
COL4A1-202ENST00000467182 CR1P17927 2039 aa10.56□□□□□ -0.72
COL4A1-202ENST00000467182 PDZD2O15018 2839 aa10.56□□□□□ -0.72
COL4A1-202ENST00000467182 ABCA12Q86UK0 2595 aa10.56□□□□□ -0.72
COL4A1-202ENST00000467182 A0A0G2JRQ6 117 aa10.55□□□□□ -0.72
COL4A1-202ENST00000467182 DUXBA0A1W2PPF3 345 aa10.55□□□□□ -0.72
COL4A1-202ENST00000467182 RNASEK-C17orf49H0YIS7 233 aa10.55□□□□□ -0.72
COL4A1-202ENST00000467182 BUB1B-PAK6H3BSN5 160 aa10.55□□□□□ -0.72
COL4A1-202ENST00000467182 ZNF16P17020 682 aaPredicted RBP10.55□□□□□ -0.72
COL4A1-202ENST00000467182 LPAR6P43657 344 aa10.55□□□□□ -0.72
COL4A1-202ENST00000467182 THBS3P49746 956 aa10.55□□□□□ -0.72
COL4A1-202ENST00000467182 PRRX1P54821 245 aa10.55□□□□□ -0.72
COL4A1-202ENST00000467182 NMSQ5H8A3 153 aa10.55□□□□□ -0.72
COL4A1-202ENST00000467182 OR2B11Q5JQS5 317 aa10.55□□□□□ -0.72
COL4A1-202ENST00000467182 SPAG16Q8N0X2 631 aa10.55□□□□□ -0.72
COL4A1-202ENST00000467182 OR13D1Q8NGV5 346 aa10.55□□□□□ -0.72
COL4A1-202ENST00000467182 OR10X1Q8NGY0 326 aa10.55□□□□□ -0.72
COL4A1-202ENST00000467182 RBPMSQ93062 196 aaKnown RBP10.55□□□□□ -0.72
COL4A1-202ENST00000467182 TMEM186Q96B77 213 aa10.55□□□□□ -0.72
COL4A1-202ENST00000467182 S1PR3Q99500 378 aa10.55□□□□□ -0.72
COL4A1-202ENST00000467182 CSMD1Q96PZ7 3565 aa10.54□□□□□ -0.72
COL4A1-202ENST00000467182 RNF223E7ERA6 249 aa10.54□□□□□ -0.72
COL4A1-202ENST00000467182 TOR1AO14656 332 aa10.54□□□□□ -0.72
COL4A1-202ENST00000467182 RBFOX2O43251 390 aaKnown RBP eCLIP10.54□□□□□ -0.72
COL4A1-202ENST00000467182 S1PR2O95136 353 aa10.54□□□□□ -0.72
COL4A1-202ENST00000467182 IGKV1-5P01602 117 aa10.54□□□□□ -0.72
COL4A1-202ENST00000467182 MSMBP08118 114 aa10.54□□□□□ -0.72
COL4A1-202ENST00000467182 P0C879 139 aa10.54□□□□□ -0.72
COL4A1-202ENST00000467182 RAP2BP61225 183 aa10.54□□□□□ -0.72
COL4A1-202ENST00000467182 GSG1LQ6UXU4 331 aa10.54□□□□□ -0.72
COL4A1-202ENST00000467182 ZNF695Q8IW36 515 aa10.54□□□□□ -0.72
COL4A1-202ENST00000467182 ASB13Q8WXK3 278 aa10.54□□□□□ -0.72
COL4A1-202ENST00000467182 RBMXL1Q96E39 390 aaKnown RBP10.54□□□□□ -0.72
COL4A1-202ENST00000467182 SEC22AQ96IW7 307 aa10.54□□□□□ -0.72
COL4A1-202ENST00000467182 C2orf50Q96LR7 162 aa10.54□□□□□ -0.72
COL4A1-202ENST00000467182 NABP2Q9BQ15 211 aa10.54□□□□□ -0.72
COL4A1-202ENST00000467182 MRPL20Q9BYC9 149 aaKnown RBP10.54□□□□□ -0.72
COL4A1-202ENST00000467182 REG4Q9BYZ8 158 aa10.54□□□□□ -0.72
COL4A1-202ENST00000467182 HEXA-AS1Q9H8Q6 139 aa10.54□□□□□ -0.72
COL4A1-202ENST00000467182 TMED3Q9Y3Q3 217 aa10.54□□□□□ -0.72
COL4A1-202ENST00000467182 TRAV14DV4A0A0A6YYC5 116 aa10.53□□□□□ -0.72
COL4A1-202ENST00000467182 C13orf42A0A1B0GVH6 325 aa10.53□□□□□ -0.72
COL4A1-202ENST00000467182 FAM25EA8MYX2 175 aa10.53□□□□□ -0.72
COL4A1-202ENST00000467182 FCGR3BO75015 233 aa10.53□□□□□ -0.72
COL4A1-202ENST00000467182 TOX4O94842 621 aa10.53□□□□□ -0.72
COL4A1-202ENST00000467182 C1QBP02746 253 aa10.53□□□□□ -0.72
COL4A1-202ENST00000467182 SERPINE2P07093 398 aa10.53□□□□□ -0.72
COL4A1-202ENST00000467182 RPA2P15927 270 aa10.53□□□□□ -0.72
COL4A1-202ENST00000467182 VDAC1P21796 283 aa10.53□□□□□ -0.72
COL4A1-202ENST00000467182 REG1BP48304 166 aa10.53□□□□□ -0.72
COL4A1-202ENST00000467182 ZNF816Q0VGE8 651 aaPredicted RBP10.53□□□□□ -0.72
COL4A1-202ENST00000467182 OR11H4Q8NGC9 324 aa10.53□□□□□ -0.72
COL4A1-202ENST00000467182 GPR146Q96CH1 333 aa10.53□□□□□ -0.72
COL4A1-202ENST00000467182 ADTRPQ96IZ2 230 aa10.53□□□□□ -0.72
COL4A1-202ENST00000467182 Q96MF0 132 aa10.53□□□□□ -0.72
COL4A1-202ENST00000467182 PCGF1Q9BSM1 259 aa10.53□□□□□ -0.72
COL4A1-202ENST00000467182 NMES1Q9C002 83 aa10.53□□□□□ -0.72
COL4A1-202ENST00000467182 AKAP9Q99996 3911 aa10.52□□□□□ -0.72
COL4A1-202ENST00000467182 C5orf51A6NDU8 294 aa10.52□□□□□ -0.73
COL4A1-202ENST00000467182 B4DSR2 109 aa10.52□□□□□ -0.73
COL4A1-202ENST00000467182 H0YJW9 148 aa10.52□□□□□ -0.73
COL4A1-202ENST00000467182 ARG1P05089 322 aa10.52□□□□□ -0.73
COL4A1-202ENST00000467182 HNRNPCP07910 306 aaKnown RBP eCLIP10.52□□□□□ -0.73
COL4A1-202ENST00000467182 IL3RAP26951 378 aa10.52□□□□□ -0.73
COL4A1-202ENST00000467182 KIR2DS2P43631 304 aa10.52□□□□□ -0.73
COL4A1-202ENST00000467182 Q6ZRM9 215 aa10.52□□□□□ -0.73
COL4A1-202ENST00000467182 ZBTB8BQ8NAP8 495 aaPredicted RBP10.52□□□□□ -0.73
COL4A1-202ENST00000467182 OR5AN1Q8NGI8 311 aa10.52□□□□□ -0.73
COL4A1-202ENST00000467182 OR4D5Q8NGN0 318 aa10.52□□□□□ -0.73
COL4A1-202ENST00000467182 OR2T35Q8NGX2 323 aa10.52□□□□□ -0.73
COL4A1-202ENST00000467182 CD300LFQ8TDQ1 290 aa10.52□□□□□ -0.73
COL4A1-202ENST00000467182 LSM10Q969L4 123 aaKnown RBP10.52□□□□□ -0.73
COL4A1-202ENST00000467182 AJUBAQ96IF1 538 aa10.52□□□□□ -0.73
COL4A1-202ENST00000467182 FOXC2Q99958 501 aa10.52□□□□□ -0.73
COL4A1-202ENST00000467182 AMMECR1Q9Y4X0 333 aaPredicted RBP10.52□□□□□ -0.73
COL4A1-202ENST00000467182 ASH1LQ9NR48 2969 aaKnown RBP10.52□□□□□ -0.73
COL4A1-202ENST00000467182 UNC79Q9P2D8 2635 aa10.51□□□□□ -0.73
COL4A1-202ENST00000467182 PRRC2AP48634 2157 aaKnown RBP10.51□□□□□ -0.73
COL4A1-202ENST00000467182 PITX3O75364 302 aa10.51□□□□□ -0.73
COL4A1-202ENST00000467182 HPRT1P00492 218 aa10.51□□□□□ -0.73
COL4A1-202ENST00000467182 IFNA21P01568 189 aa10.51□□□□□ -0.73
COL4A1-202ENST00000467182 IGHV4-31P0DP07 118 aa10.51□□□□□ -0.73
COL4A1-202ENST00000467182 GZMKP49863 264 aa10.51□□□□□ -0.73
COL4A1-202ENST00000467182 UBE2E1P51965 193 aa10.51□□□□□ -0.73
COL4A1-202ENST00000467182 IZUMO4Q1ZYL8 232 aa10.51□□□□□ -0.73
COL4A1-202ENST00000467182 IAH1Q2TAA2 248 aaPredicted RBP10.51□□□□□ -0.73
COL4A1-202ENST00000467182 TPTE2P1Q5T6R2 138 aa10.51□□□□□ -0.73
COL4A1-202ENST00000467182 LHFPL4Q7Z7J7 247 aa10.51□□□□□ -0.73
COL4A1-202ENST00000467182 NOXA1Q86UR1 476 aa10.51□□□□□ -0.73
COL4A1-202ENST00000467182 TGIF2LXQ8IUE1 241 aa10.51□□□□□ -0.73
COL4A1-202ENST00000467182 PDZD9Q8IXQ8 264 aa10.51□□□□□ -0.73
COL4A1-202ENST00000467182 LINC01356Q8N9X3 169 aa10.51□□□□□ -0.73
COL4A1-202ENST00000467182 MAPK1IP1LQ8NDC0 245 aa10.51□□□□□ -0.73
COL4A1-202ENST00000467182 WFDC11Q8NEX6 87 aa10.51□□□□□ -0.73
COL4A1-202ENST00000467182 PDCD10Q9BUL8 212 aa10.51□□□□□ -0.73
COL4A1-202ENST00000467182 PLEKHA2Q9HB19 425 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms