RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 CDK9P50750 372 aaKnown RBP1.04□□□□□ -2.24
GTF3C3-209ENST00000466862 DAPP51397 102 aa1.04□□□□□ -2.24
GTF3C3-209ENST00000466862 FOXA1P55317 472 aa1.04□□□□□ -2.24
GTF3C3-209ENST00000466862 TMEM33P57088 247 aa1.04□□□□□ -2.24
GTF3C3-209ENST00000466862 FGF12P61328 243 aa1.04□□□□□ -2.24
GTF3C3-209ENST00000466862 ERVS71-1P61550 626 aa1.04□□□□□ -2.24
GTF3C3-209ENST00000466862 MRPS25P82663 173 aaKnown RBP1.04□□□□□ -2.24
GTF3C3-209ENST00000466862 IFITM2Q01629 132 aa1.04□□□□□ -2.24
GTF3C3-209ENST00000466862 EMX1Q04741 257 aaPredicted RBP1.04□□□□□ -2.24
GTF3C3-209ENST00000466862 DHRS2Q13268 280 aa1.04□□□□□ -2.24
GTF3C3-209ENST00000466862 OR2F1Q13607 317 aa1.04□□□□□ -2.24
GTF3C3-209ENST00000466862 HIST3H3Q16695 136 aa1.04□□□□□ -2.24
GTF3C3-209ENST00000466862 KRTAP25-1Q3LHN0 102 aa1.04□□□□□ -2.24
GTF3C3-209ENST00000466862 MRPL51Q4U2R6 128 aaKnown RBP1.04□□□□□ -2.24
GTF3C3-209ENST00000466862 PYCR3Q53H96 274 aa1.04□□□□□ -2.24
GTF3C3-209ENST00000466862 C1orf194Q5T5A4 169 aa1.04□□□□□ -2.24
GTF3C3-209ENST00000466862 AMMECR1LQ6DCA0 310 aa1.04□□□□□ -2.24
GTF3C3-209ENST00000466862 TMEM86BQ8N661 226 aa1.04□□□□□ -2.24
GTF3C3-209ENST00000466862 UBL4BQ8N7F7 174 aa1.04□□□□□ -2.24
GTF3C3-209ENST00000466862 MS4A6EQ96DS6 147 aa1.04□□□□□ -2.24
GTF3C3-209ENST00000466862 CPNE2Q96FN4 548 aaPredicted RBP1.04□□□□□ -2.24
GTF3C3-209ENST00000466862 DIRAS2Q96HU8 199 aa1.04□□□□□ -2.24
GTF3C3-209ENST00000466862 ANKRD36BP1Q96IX9 119 aa1.04□□□□□ -2.24
GTF3C3-209ENST00000466862 TBX5Q99593 518 aa1.04□□□□□ -2.24
GTF3C3-209ENST00000466862 NKX6-2Q9C056 277 aaPredicted RBP1.04□□□□□ -2.24
GTF3C3-209ENST00000466862 ABCG5Q9H222 651 aa1.04□□□□□ -2.24
GTF3C3-209ENST00000466862 OR51I2Q9H344 312 aa1.04□□□□□ -2.24
GTF3C3-209ENST00000466862 DUSP21Q9H596 190 aa1.04□□□□□ -2.24
GTF3C3-209ENST00000466862 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.04□□□□□ -2.24
GTF3C3-209ENST00000466862 ASF1BQ9NVP2 202 aa1.04□□□□□ -2.24
GTF3C3-209ENST00000466862 EMC3Q9P0I2 261 aa1.04□□□□□ -2.24
GTF3C3-209ENST00000466862 VPS29Q9UBQ0 182 aa1.04□□□□□ -2.24
GTF3C3-209ENST00000466862 SLC22A13Q9Y226 551 aa1.04□□□□□ -2.24
GTF3C3-209ENST00000466862 ZNF443Q9Y2A4 671 aaPredicted RBP1.04□□□□□ -2.24
GTF3C3-209ENST00000466862 KIF15Q9NS87 1388 aa1.04□□□□□ -2.24
GTF3C3-209ENST00000466862 THSD7AQ9UPZ6 1657 aa1.04□□□□□ -2.24
GTF3C3-209ENST00000466862 TRIP11Q15643 1979 aa1.03□□□□□ -2.24
GTF3C3-209ENST00000466862 IGKV1D-37A0A075B6S9 117 aa1.03□□□□□ -2.24
GTF3C3-209ENST00000466862 IGSF23A1L1A6 192 aa1.03□□□□□ -2.24
GTF3C3-209ENST00000466862 CLDN24A6NM45 220 aa1.03□□□□□ -2.24
GTF3C3-209ENST00000466862 A8MWP6 167 aa1.03□□□□□ -2.24
GTF3C3-209ENST00000466862 DISC1C4P0D8 188 aa1.03□□□□□ -2.24
GTF3C3-209ENST00000466862 CHP2O43745 196 aa1.03□□□□□ -2.24
GTF3C3-209ENST00000466862 SYNGR2O43760 224 aa1.03□□□□□ -2.24
GTF3C3-209ENST00000466862 KRT75O95678 551 aa1.03□□□□□ -2.24
GTF3C3-209ENST00000466862 IGHV3-30-3P0DP02 117 aa1.03□□□□□ -2.24
GTF3C3-209ENST00000466862 UCHL3P15374 230 aa1.03□□□□□ -2.24
GTF3C3-209ENST00000466862 LGALS3P17931 250 aaKnown RBP1.03□□□□□ -2.24
GTF3C3-209ENST00000466862 CCL1P22362 96 aa1.03□□□□□ -2.24
GTF3C3-209ENST00000466862 HSD11B1P28845 292 aa1.03□□□□□ -2.24
GTF3C3-209ENST00000466862 CAPZBP47756 277 aa1.03□□□□□ -2.24
GTF3C3-209ENST00000466862 MARCKSL1P49006 195 aa1.03□□□□□ -2.24
GTF3C3-209ENST00000466862 IDH3GP51553 393 aaPredicted RBP1.03□□□□□ -2.24
GTF3C3-209ENST00000466862 TSPEAR-AS2P59090 65 aa1.03□□□□□ -2.24
GTF3C3-209ENST00000466862 TAS2R45P59539 299 aa1.03□□□□□ -2.24
GTF3C3-209ENST00000466862 SPCS3P61009 180 aa1.03□□□□□ -2.24
GTF3C3-209ENST00000466862 RAB5BP61020 215 aa1.03□□□□□ -2.24
GTF3C3-209ENST00000466862 CCL7P80098 99 aa1.03□□□□□ -2.24
GTF3C3-209ENST00000466862 HOXC5Q00444 222 aa1.03□□□□□ -2.24
GTF3C3-209ENST00000466862 BAMBIQ13145 260 aa1.03□□□□□ -2.24
GTF3C3-209ENST00000466862 PRDX4Q13162 271 aa1.03□□□□□ -2.24
GTF3C3-209ENST00000466862 SRSF6Q13247 344 aaKnown RBP1.03□□□□□ -2.24
GTF3C3-209ENST00000466862 SPA17Q15506 151 aa1.03□□□□□ -2.24
GTF3C3-209ENST00000466862 SLC9A3R2Q15599 337 aa1.03□□□□□ -2.24
GTF3C3-209ENST00000466862 KRTAP13-4Q3LI77 160 aa1.03□□□□□ -2.24
GTF3C3-209ENST00000466862 AKIRIN2Q53H80 203 aa1.03□□□□□ -2.24
GTF3C3-209ENST00000466862 SPOPLQ6IQ16 392 aa1.03□□□□□ -2.24
GTF3C3-209ENST00000466862 NOXRED1Q6NXP6 359 aa1.03□□□□□ -2.24
GTF3C3-209ENST00000466862 SBSNQ6UWP8 590 aa1.03□□□□□ -2.24
GTF3C3-209ENST00000466862 ZNF550Q7Z398 422 aa1.03□□□□□ -2.24
GTF3C3-209ENST00000466862 S100A7AQ86SG5 101 aa1.03□□□□□ -2.24
GTF3C3-209ENST00000466862 LYPD6Q86Y78 171 aa1.03□□□□□ -2.24
GTF3C3-209ENST00000466862 BAP18Q8IXM2 172 aa1.03□□□□□ -2.24
GTF3C3-209ENST00000466862 C1orf174Q8IYL3 243 aa1.03□□□□□ -2.24
GTF3C3-209ENST00000466862 EIF4E3Q8N5X7 224 aaKnown RBP1.03□□□□□ -2.24
GTF3C3-209ENST00000466862 CLDN22Q8N7P3 220 aa1.03□□□□□ -2.24
GTF3C3-209ENST00000466862 OR2D3Q8NGH3 330 aa1.03□□□□□ -2.24
GTF3C3-209ENST00000466862 OR2T27Q8NH04 317 aa1.03□□□□□ -2.24
GTF3C3-209ENST00000466862 CD200R1Q8TD46 325 aa1.03□□□□□ -2.24
GTF3C3-209ENST00000466862 OR5P3Q8WZ94 311 aa1.03□□□□□ -2.24
GTF3C3-209ENST00000466862 C12orf43Q96C57 262 aaKnown RBP1.03□□□□□ -2.24
GTF3C3-209ENST00000466862 DGCR14Q96DF8 476 aaKnown RBP1.03□□□□□ -2.24
GTF3C3-209ENST00000466862 TVP23CQ96ET8 276 aa1.03□□□□□ -2.24
GTF3C3-209ENST00000466862 SLC25A44Q96H78 314 aaPredicted RBP1.03□□□□□ -2.24
GTF3C3-209ENST00000466862 PRAP1Q96NZ9 151 aa1.03□□□□□ -2.24
GTF3C3-209ENST00000466862 MGLLQ99685 303 aa1.03□□□□□ -2.24
GTF3C3-209ENST00000466862 PECRQ9BY49 303 aa1.03□□□□□ -2.24
GTF3C3-209ENST00000466862 IL20Q9NYY1 176 aa1.03□□□□□ -2.24
GTF3C3-209ENST00000466862 VPREB3Q9UKI3 123 aa1.03□□□□□ -2.24
GTF3C3-209ENST00000466862 CRB1P82279 1406 aa1.03□□□□□ -2.24
GTF3C3-209ENST00000466862 A0A1B0GU33 70 aa1.02□□□□□ -2.25
GTF3C3-209ENST00000466862 A0A1B0GV50 99 aa1.02□□□□□ -2.25
GTF3C3-209ENST00000466862 LOC102725191A0A1B0GVB3 256 aa1.02□□□□□ -2.25
GTF3C3-209ENST00000466862 DHRS12A0PJE2 317 aa1.02□□□□□ -2.25
GTF3C3-209ENST00000466862 OR6C6A6NF89 314 aa1.02□□□□□ -2.25
GTF3C3-209ENST00000466862 SMIM9A6NGZ8 99 aa1.02□□□□□ -2.25
GTF3C3-209ENST00000466862 EEF1E1-BLOC1S5C9J1V9 151 aa1.02□□□□□ -2.25
GTF3C3-209ENST00000466862 ZNF878C9JN71 531 aa1.02□□□□□ -2.25
GTF3C3-209ENST00000466862 KPNA3O00505 521 aaPredicted RBP1.02□□□□□ -2.25
GTF3C3-209ENST00000466862 FADS1O60427 444 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms