RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 SLC5A7Q9GZV3 580 aa4.47□□□□□ -1.69
VPS41-211ENST00000466017 FXYD6Q9H0Q3 95 aa4.47□□□□□ -1.69
VPS41-211ENST00000466017 NAA60Q9H7X0 242 aa4.47□□□□□ -1.69
VPS41-211ENST00000466017 CCL28Q9NRJ3 127 aa4.47□□□□□ -1.69
VPS41-211ENST00000466017 SLC2A9Q9NRM0 540 aa4.47□□□□□ -1.69
VPS41-211ENST00000466017 OR1A1Q9P1Q5 309 aa4.47□□□□□ -1.69
VPS41-211ENST00000466017 ALG5Q9Y673 324 aa4.47□□□□□ -1.69
VPS41-211ENST00000466017 SESN1Q9Y6P5 492 aa4.47□□□□□ -1.69
VPS41-211ENST00000466017 CFAP46Q8IYW2 2715 aa4.47□□□□□ -1.69
VPS41-211ENST00000466017 A0A096LNT2 108 aa4.46□□□□□ -1.7
VPS41-211ENST00000466017 IGKV1D-13A0A0B4J2D9 117 aa4.46□□□□□ -1.7
VPS41-211ENST00000466017 C3orf85A0A1B0GTC6 90 aa4.46□□□□□ -1.7
VPS41-211ENST00000466017 RNF212BA8MTL3 300 aa4.46□□□□□ -1.7
VPS41-211ENST00000466017 VGLL3A8MV65 326 aa4.46□□□□□ -1.7
VPS41-211ENST00000466017 RAB29O14966 203 aa4.46□□□□□ -1.7
VPS41-211ENST00000466017 RBFOX2O43251 390 aaKnown RBP eCLIP4.46□□□□□ -1.7
VPS41-211ENST00000466017 ENSAO43768 121 aaKnown RBP4.46□□□□□ -1.7
VPS41-211ENST00000466017 PROP1O75360 226 aa4.46□□□□□ -1.7
VPS41-211ENST00000466017 CDS2O95674 445 aa4.46□□□□□ -1.7
VPS41-211ENST00000466017 NUDT3O95989 172 aa4.46□□□□□ -1.7
VPS41-211ENST00000466017 IGLV1-47P01700 117 aa4.46□□□□□ -1.7
VPS41-211ENST00000466017 OR8U9P0C7N5 309 aa4.46□□□□□ -1.7
VPS41-211ENST00000466017 IGKV1-13P0DP09 117 aa4.46□□□□□ -1.7
VPS41-211ENST00000466017 HKR1P10072 659 aa4.46□□□□□ -1.7
VPS41-211ENST00000466017 F2RP25116 425 aa4.46□□□□□ -1.7
VPS41-211ENST00000466017 UCP1P25874 307 aa4.46□□□□□ -1.7
VPS41-211ENST00000466017 SSTR5P35346 364 aa4.46□□□□□ -1.7
VPS41-211ENST00000466017 ZNF134P52741 427 aa4.46□□□□□ -1.7
VPS41-211ENST00000466017 PRRX1P54821 245 aa4.46□□□□□ -1.7
VPS41-211ENST00000466017 PAX8Q06710 450 aa4.46□□□□□ -1.7
VPS41-211ENST00000466017 PPP1R1AQ13522 171 aa4.46□□□□□ -1.7
VPS41-211ENST00000466017 TMEM187Q14656 261 aa4.46□□□□□ -1.7
VPS41-211ENST00000466017 CLEC12BQ2HXU8 276 aa4.46□□□□□ -1.7
VPS41-211ENST00000466017 ABCA11PQ4W5N1 156 aa4.46□□□□□ -1.7
VPS41-211ENST00000466017 C4orf46Q504U0 113 aa4.46□□□□□ -1.7
VPS41-211ENST00000466017 CT45A1Q5HYN5 189 aa4.46□□□□□ -1.7
VPS41-211ENST00000466017 ADAD2Q8NCV1 583 aaKnown RBP4.46□□□□□ -1.7
VPS41-211ENST00000466017 OR2AK2Q8NG84 335 aa4.46□□□□□ -1.7
VPS41-211ENST00000466017 OR11H6Q8NGC7 330 aa4.46□□□□□ -1.7
VPS41-211ENST00000466017 OR8U1Q8NH10 309 aa4.46□□□□□ -1.7
VPS41-211ENST00000466017 CT45A3Q8NHU0 189 aa4.46□□□□□ -1.7
VPS41-211ENST00000466017 CD300LFQ8TDQ1 290 aa4.46□□□□□ -1.7
VPS41-211ENST00000466017 GLYATL2Q8WU03 294 aa4.46□□□□□ -1.7
VPS41-211ENST00000466017 SECTM1Q8WVN6 248 aa4.46□□□□□ -1.7
VPS41-211ENST00000466017 CAPSLQ8WWF8 208 aa4.46□□□□□ -1.7
VPS41-211ENST00000466017 IL1F10Q8WWZ1 152 aa4.46□□□□□ -1.7
VPS41-211ENST00000466017 H1FXQ92522 213 aaKnown RBP4.46□□□□□ -1.7
VPS41-211ENST00000466017 ST6GALNAC6Q969X2 333 aa4.46□□□□□ -1.7
VPS41-211ENST00000466017 MSI2Q96DH6 328 aaKnown RBP4.46□□□□□ -1.7
VPS41-211ENST00000466017 ADTRPQ96IZ2 230 aa4.46□□□□□ -1.7
VPS41-211ENST00000466017 TMEM56Q96MV1 263 aa4.46□□□□□ -1.7
VPS41-211ENST00000466017 PHB2Q99623 299 aa4.46□□□□□ -1.7
VPS41-211ENST00000466017 HSD17B10Q99714 261 aaKnown RBP4.46□□□□□ -1.7
VPS41-211ENST00000466017 ZNF251Q9BRH9 671 aa4.46□□□□□ -1.7
VPS41-211ENST00000466017 AIFM2Q9BRQ8 373 aa4.46□□□□□ -1.7
VPS41-211ENST00000466017 MED28Q9H204 178 aa4.46□□□□□ -1.7
VPS41-211ENST00000466017 HEXA-AS1Q9H8Q6 139 aa4.46□□□□□ -1.7
VPS41-211ENST00000466017 RAB18Q9NP72 206 aa4.46□□□□□ -1.7
VPS41-211ENST00000466017 GNG12Q9UBI6 72 aa4.46□□□□□ -1.7
VPS41-211ENST00000466017 PSG11Q9UQ72 335 aa4.46□□□□□ -1.7
VPS41-211ENST00000466017 RBM7Q9Y580 266 aaKnown RBP4.46□□□□□ -1.7
VPS41-211ENST00000466017 TMEM56-RWDD3S4R434 201 aa4.46□□□□□ -1.7
VPS41-211ENST00000466017 SMG1Q96Q15 3661 aaKnown RBP4.46□□□□□ -1.7
VPS41-211ENST00000466017 USP9XQ93008 2570 aaPredicted RBP4.46□□□□□ -1.7
VPS41-211ENST00000466017 SPTAN1Q13813 2472 aaKnown RBP4.46□□□□□ -1.7
VPS41-211ENST00000466017 ARID1AO14497 2285 aa4.46□□□□□ -1.7
VPS41-211ENST00000466017 IGHV4-61A0A0C4DH41 118 aa4.45□□□□□ -1.7
VPS41-211ENST00000466017 IGHV2-70DA0A0C4DH43 119 aa4.45□□□□□ -1.7
VPS41-211ENST00000466017 OOSP1A8MZH6 123 aa4.45□□□□□ -1.7
VPS41-211ENST00000466017 H0Y980 276 aa4.45□□□□□ -1.7
VPS41-211ENST00000466017 J3QR06 171 aa4.45□□□□□ -1.7
VPS41-211ENST00000466017 MMP23AO75900 390 aa4.45□□□□□ -1.7
VPS41-211ENST00000466017 IFNA2P01563 188 aa4.45□□□□□ -1.7
VPS41-211ENST00000466017 HLA-AP01891 365 aaKnown RBP4.45□□□□□ -1.7
VPS41-211ENST00000466017 RRASP10301 218 aa4.45□□□□□ -1.7
VPS41-211ENST00000466017 SLC25A6P12236 298 aa4.45□□□□□ -1.7
VPS41-211ENST00000466017 MMP9P14780 707 aa4.45□□□□□ -1.7
VPS41-211ENST00000466017 CCL3L1P16619 93 aa4.45□□□□□ -1.7
VPS41-211ENST00000466017 AKR1C4P17516 323 aa4.45□□□□□ -1.7
VPS41-211ENST00000466017 VDAC1P21796 283 aa4.45□□□□□ -1.7
VPS41-211ENST00000466017 USF1P22415 310 aaPredicted RBP4.45□□□□□ -1.7
VPS41-211ENST00000466017 DUTP33316 252 aaKnown RBP4.45□□□□□ -1.7
VPS41-211ENST00000466017 PPP1CCP36873 323 aaKnown RBP4.45□□□□□ -1.7
VPS41-211ENST00000466017 KIR2DS2P43631 304 aa4.45□□□□□ -1.7
VPS41-211ENST00000466017 THBS3P49746 956 aa4.45□□□□□ -1.7
VPS41-211ENST00000466017 DVL1P1P54792 670 aaPredicted RBP4.45□□□□□ -1.7
VPS41-211ENST00000466017 FXYD4P59646 89 aa4.45□□□□□ -1.7
VPS41-211ENST00000466017 KRTAP10-9P60411 292 aa4.45□□□□□ -1.7
VPS41-211ENST00000466017 CYCSP99999 105 aaKnown RBP4.45□□□□□ -1.7
VPS41-211ENST00000466017 CATR1Q13166 79 aa4.45□□□□□ -1.7
VPS41-211ENST00000466017 ZNF818PQ6ZRF7 136 aa4.45□□□□□ -1.7
VPS41-211ENST00000466017 ZNF833PQ6ZTB9 187 aa4.45□□□□□ -1.7
VPS41-211ENST00000466017 TMED4Q7Z7H5 227 aa4.45□□□□□ -1.7
VPS41-211ENST00000466017 TBC1D26Q86UD7 250 aa4.45□□□□□ -1.7
VPS41-211ENST00000466017 ODF3L1Q8IXM7 274 aa4.45□□□□□ -1.7
VPS41-211ENST00000466017 TCTE3Q8IZS6 198 aa4.45□□□□□ -1.7
VPS41-211ENST00000466017 LGI3Q8N145 548 aa4.45□□□□□ -1.7
VPS41-211ENST00000466017 ABHD12Q8N2K0 398 aa4.45□□□□□ -1.7
VPS41-211ENST00000466017 FGFRL1Q8N441 504 aa4.45□□□□□ -1.7
VPS41-211ENST00000466017 DRAM1Q8N682 238 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms