RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 UQCC2Q9BRT2 126 aa8.88□□□□□ -0.99
CNOT4-208ENST00000465721 FAAP24Q9BTP7 215 aa8.88□□□□□ -0.99
CNOT4-208ENST00000465721 SRD5A3Q9H8P0 318 aa8.88□□□□□ -0.99
CNOT4-208ENST00000465721 CLEC2DQ9UHP7 191 aa8.88□□□□□ -0.99
CNOT4-208ENST00000465721 LOC100130705A0A1B0GUX0 176 aa8.87□□□□□ -0.99
CNOT4-208ENST00000465721 ZNF785A8K8V0 405 aa8.87□□□□□ -0.99
CNOT4-208ENST00000465721 IGLV2-23P01705 113 aa8.87□□□□□ -0.99
CNOT4-208ENST00000465721 CRYGBP07316 175 aa8.87□□□□□ -0.99
CNOT4-208ENST00000465721 CAPGP40121 348 aa8.87□□□□□ -0.99
CNOT4-208ENST00000465721 RPS16P62249 146 aaKnown RBP8.87□□□□□ -0.99
CNOT4-208ENST00000465721 RPEL1Q2QD12 228 aa8.87□□□□□ -0.99
CNOT4-208ENST00000465721 MOB1BQ7L9L4 216 aa8.87□□□□□ -0.99
CNOT4-208ENST00000465721 NKAIN3Q8N8D7 197 aa8.87□□□□□ -0.99
CNOT4-208ENST00000465721 NEDD4LQ96PU5 975 aa8.87□□□□□ -0.99
CNOT4-208ENST00000465721 C11orf54Q9H0W9 315 aaPredicted RBP8.87□□□□□ -0.99
CNOT4-208ENST00000465721 GHRLQ9UBU3 117 aa8.87□□□□□ -0.99
CNOT4-208ENST00000465721 DIMT1Q9UNQ2 313 aaKnown RBP8.87□□□□□ -0.99
CNOT4-208ENST00000465721 ABCA13Q86UQ4 5058 aa8.87□□□□□ -0.99
CNOT4-208ENST00000465721 BMPR1BO00238 502 aa8.86□□□□□ -0.99
CNOT4-208ENST00000465721 LY6G6CO95867 125 aa8.86□□□□□ -0.99
CNOT4-208ENST00000465721 APOA2P02652 100 aa8.86□□□□□ -0.99
CNOT4-208ENST00000465721 HTR2CP28335 458 aa8.86□□□□□ -0.99
CNOT4-208ENST00000465721 RPS27AP62979 156 aaKnown RBP8.86□□□□□ -0.99
CNOT4-208ENST00000465721 HLA-DRB3P79483 266 aa8.86□□□□□ -0.99
CNOT4-208ENST00000465721 TATDN3Q17R31 274 aa8.86□□□□□ -0.99
CNOT4-208ENST00000465721 OR10K2Q6IF99 312 aa8.86□□□□□ -0.99
CNOT4-208ENST00000465721 EDARADDQ8WWZ3 215 aa8.86□□□□□ -0.99
CNOT4-208ENST00000465721 PTX4Q96A99 478 aa8.86□□□□□ -0.99
CNOT4-208ENST00000465721 USMG5Q96IX5 58 aa8.86□□□□□ -0.99
CNOT4-208ENST00000465721 NICN1Q9BSH3 213 aa8.86□□□□□ -0.99
CNOT4-208ENST00000465721 KCNK15Q9H427 330 aa8.86□□□□□ -0.99
CNOT4-208ENST00000465721 ZC4H2Q9NQZ6 224 aa8.86□□□□□ -0.99
CNOT4-208ENST00000465721 SLC2A8Q9NY64 477 aa8.86□□□□□ -0.99
CNOT4-208ENST00000465721 PEMTQ9UBM1 199 aa8.86□□□□□ -0.99
CNOT4-208ENST00000465721 EXOSC1Q9Y3B2 195 aaKnown RBP8.86□□□□□ -0.99
CNOT4-208ENST00000465721 TRBV6-6A0A0A6YYG2 114 aa8.85□□□□□ -0.99
CNOT4-208ENST00000465721 PNMA8CA0A1B0GUJ8 204 aa8.85□□□□□ -0.99
CNOT4-208ENST00000465721 AIREO43918 545 aa8.85□□□□□ -0.99
CNOT4-208ENST00000465721 CIB2O75838 187 aa8.85□□□□□ -0.99
CNOT4-208ENST00000465721 CNIH1O95406 144 aa8.85□□□□□ -0.99
CNOT4-208ENST00000465721 MYL12AP19105 171 aa8.85□□□□□ -0.99
CNOT4-208ENST00000465721 EDN2P20800 178 aa8.85□□□□□ -0.99
CNOT4-208ENST00000465721 UNC119Q13432 240 aa8.85□□□□□ -0.99
CNOT4-208ENST00000465721 MRGPRG-AS1Q2M3A8 158 aa8.85□□□□□ -0.99
CNOT4-208ENST00000465721 ADAD2Q8NCV1 583 aaKnown RBP8.85□□□□□ -0.99
CNOT4-208ENST00000465721 SETD6Q8TBK2 473 aa8.85□□□□□ -0.99
CNOT4-208ENST00000465721 SNAPC3Q92966 411 aa8.85□□□□□ -0.99
CNOT4-208ENST00000465721 TMEM68Q96MH6 324 aa8.85□□□□□ -0.99
CNOT4-208ENST00000465721 HDHD3Q9BSH5 251 aaPredicted RBP8.85□□□□□ -0.99
CNOT4-208ENST00000465721 ST6GALNAC5Q9BVH7 336 aa8.85□□□□□ -0.99
CNOT4-208ENST00000465721 TM2D1Q9BX74 207 aa8.85□□□□□ -0.99
CNOT4-208ENST00000465721 TMEM59Q9BXS4 323 aa8.85□□□□□ -0.99
CNOT4-208ENST00000465721 CHMP1AQ9HD42 196 aaPredicted RBP8.85□□□□□ -0.99
CNOT4-208ENST00000465721 SLC35D1Q9NTN3 355 aa8.85□□□□□ -0.99
CNOT4-208ENST00000465721 COA4Q9NYJ1 87 aa8.85□□□□□ -0.99
CNOT4-208ENST00000465721 ZNF230Q9UIE0 474 aaPredicted RBP8.85□□□□□ -0.99
CNOT4-208ENST00000465721 FAT2Q9NYQ8 4349 aa8.84□□□□□ -0.99
CNOT4-208ENST00000465721 DNAH17Q9UFH2 4485 aa8.84□□□□□ -0.99
CNOT4-208ENST00000465721 A0A0A6YYD4 124 aa8.84□□□□□ -0.99
CNOT4-208ENST00000465721 A0A0B4J203 849 aa8.84□□□□□ -0.99
CNOT4-208ENST00000465721 IGKV1-6A0A0C4DH72 117 aa8.84□□□□□ -0.99
CNOT4-208ENST00000465721 OR11H12B2RN74 326 aa8.84□□□□□ -0.99
CNOT4-208ENST00000465721 UBBP0CG47 229 aa8.84□□□□□ -0.99
CNOT4-208ENST00000465721 APELAP0DMC3 54 aa8.84□□□□□ -0.99
CNOT4-208ENST00000465721 ZBTB25P24278 435 aa8.84□□□□□ -0.99
CNOT4-208ENST00000465721 CEACAM6P40199 344 aa8.84□□□□□ -0.99
CNOT4-208ENST00000465721 LGALS7P47929 136 aa8.84□□□□□ -0.99
CNOT4-208ENST00000465721 EXOSC2Q13868 293 aaKnown RBP8.84□□□□□ -0.99
CNOT4-208ENST00000465721 DEFB114Q30KQ6 69 aa8.84□□□□□ -0.99
CNOT4-208ENST00000465721 DDB2Q92466 427 aa8.84□□□□□ -0.99
CNOT4-208ENST00000465721 OVOL2Q9BRP0 275 aa8.84□□□□□ -0.99
CNOT4-208ENST00000465721 C9orf16Q9BUW7 83 aa8.84□□□□□ -0.99
CNOT4-208ENST00000465721 IRGMA1A4Y4 181 aa8.83□□□□□ -1
CNOT4-208ENST00000465721 C2orf70A6NJV1 201 aa8.83□□□□□ -1
CNOT4-208ENST00000465721 M0R1X1 148 aa8.83□□□□□ -1
CNOT4-208ENST00000465721 SCTP09683 121 aa8.83□□□□□ -1
CNOT4-208ENST00000465721 QRFPP83859 136 aa8.83□□□□□ -1
CNOT4-208ENST00000465721 EWSR1Q01844 656 aaKnown RBP eCLIP8.83□□□□□ -1
CNOT4-208ENST00000465721 ZNF45Q02386 682 aa8.83□□□□□ -1
CNOT4-208ENST00000465721 PMS2P11Q13670 270 aa8.83□□□□□ -1
CNOT4-208ENST00000465721 C1orf100Q5SVJ3 147 aa8.83□□□□□ -1
CNOT4-208ENST00000465721 ZFP1Q6P2D0 407 aa8.83□□□□□ -1
CNOT4-208ENST00000465721 RPP25LQ8N5L8 163 aaKnown RBP8.83□□□□□ -1
CNOT4-208ENST00000465721 KCNG3Q8TAE7 436 aa8.83□□□□□ -1
CNOT4-208ENST00000465721 DYNLRB2Q8TF09 96 aa8.83□□□□□ -1
CNOT4-208ENST00000465721 WDR89Q96FK6 387 aaPredicted RBP8.83□□□□□ -1
CNOT4-208ENST00000465721 C5orf30Q96GV9 206 aa8.83□□□□□ -1
CNOT4-208ENST00000465721 HARBI1Q96MB7 349 aa8.83□□□□□ -1
CNOT4-208ENST00000465721 AKIP1Q9NQ31 210 aa8.83□□□□□ -1
CNOT4-208ENST00000465721 AK3Q9UIJ7 227 aa8.83□□□□□ -1
CNOT4-208ENST00000465721 ZNF221Q9UK13 617 aa8.83□□□□□ -1
CNOT4-208ENST00000465721 DNAH2Q9P225 4427 aa8.83□□□□□ -1
CNOT4-208ENST00000465721 TRBV9A0A0B4J1U6 114 aa8.82□□□□□ -1
CNOT4-208ENST00000465721 CXorf65A6NEN9 183 aa8.82□□□□□ -1
CNOT4-208ENST00000465721 NUPR2A6NF83 97 aa8.82□□□□□ -1
CNOT4-208ENST00000465721 FAM223BA6NKX1 122 aa8.82□□□□□ -1
CNOT4-208ENST00000465721 SRRM4A7MD48 611 aaKnown RBP8.82□□□□□ -1
CNOT4-208ENST00000465721 TMEM14DPA8MWL7 114 aa8.82□□□□□ -1
CNOT4-208ENST00000465721 OR9G9P0C7N8 305 aa8.82□□□□□ -1
CNOT4-208ENST00000465721 MAPK3P27361 379 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms