RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 RPS16P62249 146 aaKnown RBP9.22□□□□□ -0.93
CUX1-207ENST00000465461 RPL30P62888 115 aaKnown RBP9.22□□□□□ -0.93
CUX1-207ENST00000465461 OR2B11Q5JQS5 317 aa9.22□□□□□ -0.93
CUX1-207ENST00000465461 CENPVQ7Z7K6 275 aaPredicted RBP9.22□□□□□ -0.93
CUX1-207ENST00000465461 ZNF329Q86UD4 541 aa9.22□□□□□ -0.93
CUX1-207ENST00000465461 ZNF645Q8N7E2 425 aa9.22□□□□□ -0.93
CUX1-207ENST00000465461 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.22□□□□□ -0.93
CUX1-207ENST00000465461 OR5H2Q8NGV7 314 aa9.22□□□□□ -0.93
CUX1-207ENST00000465461 SECTM1Q8WVN6 248 aa9.22□□□□□ -0.93
CUX1-207ENST00000465461 DIRAS2Q96HU8 199 aa9.22□□□□□ -0.93
CUX1-207ENST00000465461 CLCC1Q96S66 551 aa9.22□□□□□ -0.93
CUX1-207ENST00000465461 FBXL15Q9H469 300 aa9.22□□□□□ -0.93
CUX1-207ENST00000465461 SLC35D1Q9NTN3 355 aa9.22□□□□□ -0.93
CUX1-207ENST00000465461 LIN7CQ9NUP9 197 aaKnown RBP9.22□□□□□ -0.93
CUX1-207ENST00000465461 DPPA5A6NC42 116 aa9.21□□□□□ -0.94
CUX1-207ENST00000465461 M0QYG6 137 aa9.21□□□□□ -0.94
CUX1-207ENST00000465461 FCN1O00602 326 aa9.21□□□□□ -0.94
CUX1-207ENST00000465461 APOA2P02652 100 aa9.21□□□□□ -0.94
CUX1-207ENST00000465461 DGCR2P98153 550 aa9.21□□□□□ -0.94
CUX1-207ENST00000465461 IL18Q14116 193 aa9.21□□□□□ -0.94
CUX1-207ENST00000465461 FOXB2Q5VYV0 432 aa9.21□□□□□ -0.94
CUX1-207ENST00000465461 OVCH2Q7RTZ1 564 aa9.21□□□□□ -0.94
CUX1-207ENST00000465461 SLC35E3Q7Z769 313 aa9.21□□□□□ -0.94
CUX1-207ENST00000465461 TMEM17Q86X19 198 aa9.21□□□□□ -0.94
CUX1-207ENST00000465461 NPBQ8NG41 125 aa9.21□□□□□ -0.94
CUX1-207ENST00000465461 OR5AU1Q8NGC0 362 aa9.21□□□□□ -0.94
CUX1-207ENST00000465461 OR8H1Q8NGG4 311 aa9.21□□□□□ -0.94
CUX1-207ENST00000465461 WIPF2Q8TF74 440 aaPredicted RBP9.21□□□□□ -0.94
CUX1-207ENST00000465461 GIMAP1Q8WWP7 306 aa9.21□□□□□ -0.94
CUX1-207ENST00000465461 ZNF2Q9BSG1 426 aaPredicted RBP9.21□□□□□ -0.94
CUX1-207ENST00000465461 SLC5A7Q9GZV3 580 aa9.21□□□□□ -0.94
CUX1-207ENST00000465461 NXF2Q9GZY0 626 aaKnown RBP9.21□□□□□ -0.94
CUX1-207ENST00000465461 SCPEP1Q9HB40 452 aa9.21□□□□□ -0.94
CUX1-207ENST00000465461 TAS2R8Q9NYW2 309 aa9.21□□□□□ -0.94
CUX1-207ENST00000465461 ZNF107Q9UII5 783 aaPredicted RBP9.21□□□□□ -0.94
CUX1-207ENST00000465461 ADAM30Q9UKF2 790 aa9.21□□□□□ -0.94
CUX1-207ENST00000465461 RBMX2Q9Y388 322 aaKnown RBP9.21□□□□□ -0.94
CUX1-207ENST00000465461 SRRM4A7MD48 611 aaKnown RBP9.2□□□□□ -0.94
CUX1-207ENST00000465461 SULT1C2O00338 296 aa9.2□□□□□ -0.94
CUX1-207ENST00000465461 RRHO14718 337 aa9.2□□□□□ -0.94
CUX1-207ENST00000465461 FBXO24O75426 580 aa9.2□□□□□ -0.94
CUX1-207ENST00000465461 NDUFA3O95167 84 aa9.2□□□□□ -0.94
CUX1-207ENST00000465461 IGHG2P01859 326 aa9.2□□□□□ -0.94
CUX1-207ENST00000465461 TNFSF8P32971 234 aa9.2□□□□□ -0.94
CUX1-207ENST00000465461 RCVRNP35243 200 aa9.2□□□□□ -0.94
CUX1-207ENST00000465461 THBS3P49746 956 aa9.2□□□□□ -0.94
CUX1-207ENST00000465461 DYRK1AQ13627 763 aa9.2□□□□□ -0.94
CUX1-207ENST00000465461 PSG5Q15238 335 aa9.2□□□□□ -0.94
CUX1-207ENST00000465461 C5orf64Q2M2E5 130 aa9.2□□□□□ -0.94
CUX1-207ENST00000465461 NSUN5P1Q3KNT7 163 aa9.2□□□□□ -0.94
CUX1-207ENST00000465461 TCTEX1D4Q5JR98 221 aa9.2□□□□□ -0.94
CUX1-207ENST00000465461 ZNF660Q6AZW8 331 aaPredicted RBP9.2□□□□□ -0.94
CUX1-207ENST00000465461 LIN54Q6MZP7 749 aa9.2□□□□□ -0.94
CUX1-207ENST00000465461 PDPNQ86YL7 162 aa9.2□□□□□ -0.94
CUX1-207ENST00000465461 DDB2Q92466 427 aa9.2□□□□□ -0.94
CUX1-207ENST00000465461 FLYWCH2Q96CP2 140 aaKnown RBP9.2□□□□□ -0.94
CUX1-207ENST00000465461 CITED2Q99967 270 aaPredicted RBP9.2□□□□□ -0.94
CUX1-207ENST00000465461 TPSG1Q9NRR2 321 aa9.2□□□□□ -0.94
CUX1-207ENST00000465461 KIAA1456Q9P272 454 aa9.2□□□□□ -0.94
CUX1-207ENST00000465461 METTL1Q9UBP6 276 aaKnown RBP9.2□□□□□ -0.94
CUX1-207ENST00000465461 BOLA1Q9Y3E2 137 aa9.2□□□□□ -0.94
CUX1-207ENST00000465461 IGHV7-81A0A0B4J1V7 117 aa9.19□□□□□ -0.94
CUX1-207ENST00000465461 A0A1W2PRX2 142 aa9.19□□□□□ -0.94
CUX1-207ENST00000465461 SLC25A17O43808 307 aa9.19□□□□□ -0.94
CUX1-207ENST00000465461 FCGR3BO75015 233 aa9.19□□□□□ -0.94
CUX1-207ENST00000465461 RBBP9O75884 186 aa9.19□□□□□ -0.94
CUX1-207ENST00000465461 CRYZL1O95825 349 aa9.19□□□□□ -0.94
CUX1-207ENST00000465461 IGLV2-23P01705 113 aa9.19□□□□□ -0.94
CUX1-207ENST00000465461 TAS2R46P59540 309 aa9.19□□□□□ -0.94
CUX1-207ENST00000465461 EIF4EBP1Q13541 118 aaPredicted RBP9.19□□□□□ -0.94
CUX1-207ENST00000465461 PLGLAQ15195 96 aa9.19□□□□□ -0.94
CUX1-207ENST00000465461 DHRS11Q6UWP2 260 aa9.19□□□□□ -0.94
CUX1-207ENST00000465461 ZNF818PQ6ZRF7 136 aa9.19□□□□□ -0.94
CUX1-207ENST00000465461 KCTD9Q7L273 389 aa9.19□□□□□ -0.94
CUX1-207ENST00000465461 STPG2Q8N412 459 aa9.19□□□□□ -0.94
CUX1-207ENST00000465461 MFSD4AQ8N468 514 aa9.19□□□□□ -0.94
CUX1-207ENST00000465461 OR4D10Q8NGI6 311 aa9.19□□□□□ -0.94
CUX1-207ENST00000465461 FCAMRQ8WWV6 532 aa9.19□□□□□ -0.94
CUX1-207ENST00000465461 TINAGL1Q9GZM7 467 aaPredicted RBP9.19□□□□□ -0.94
CUX1-207ENST00000465461 FXYD6Q9H0Q3 95 aa9.19□□□□□ -0.94
CUX1-207ENST00000465461 MTFP1Q9UDX5 166 aa9.19□□□□□ -0.94
CUX1-207ENST00000465461 PSMB11A5LHX3 300 aa9.18□□□□□ -0.94
CUX1-207ENST00000465461 G3V318 75 aa9.18□□□□□ -0.94
CUX1-207ENST00000465461 SHOXO15266 292 aa9.18□□□□□ -0.94
CUX1-207ENST00000465461 ATP6V0E1O15342 81 aa9.18□□□□□ -0.94
CUX1-207ENST00000465461 TSPAN15O95858 294 aa9.18□□□□□ -0.94
CUX1-207ENST00000465461 CD3DP04234 171 aa9.18□□□□□ -0.94
CUX1-207ENST00000465461 GNRHRP30968 328 aa9.18□□□□□ -0.94
CUX1-207ENST00000465461 BRWD1-AS2P59051 145 aa9.18□□□□□ -0.94
CUX1-207ENST00000465461 HERV-K104P61576 105 aa9.18□□□□□ -0.94
CUX1-207ENST00000465461 TSPAN5P62079 268 aa9.18□□□□□ -0.94
CUX1-207ENST00000465461 NDPQ00604 133 aa9.18□□□□□ -0.94
CUX1-207ENST00000465461 PYHIN1Q6K0P9 492 aa9.18□□□□□ -0.94
CUX1-207ENST00000465461 FAAP20Q6NZ36 180 aa9.18□□□□□ -0.94
CUX1-207ENST00000465461 IDO2Q6ZQW0 420 aa9.18□□□□□ -0.94
CUX1-207ENST00000465461 LCNL1Q6ZST4 164 aa9.18□□□□□ -0.94
CUX1-207ENST00000465461 FOXRED2Q8IWF2 684 aa9.18□□□□□ -0.94
CUX1-207ENST00000465461 OR6F1Q8NGZ6 308 aa9.18□□□□□ -0.94
CUX1-207ENST00000465461 TCTEX1D2Q8WW35 142 aa9.18□□□□□ -0.94
CUX1-207ENST00000465461 MOB3AQ96BX8 217 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms