RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 LINC00473A8K010 186 aa15.31■□□□□ 0.04
SYNE4-204ENST00000465425 HOXA5P20719 270 aa15.31■□□□□ 0.04
SYNE4-204ENST00000465425 MEF2BQ02080 365 aaPredicted RBP15.31■□□□□ 0.04
SYNE4-204ENST00000465425 ACSM6Q6P461 480 aa15.31■□□□□ 0.04
SYNE4-204ENST00000465425 TRAT1Q6PIZ9 186 aa15.31■□□□□ 0.04
SYNE4-204ENST00000465425 DOK5Q9P104 306 aa15.31■□□□□ 0.04
SYNE4-204ENST00000465425 IGHV2OR16-5A0A0B4J2B6 119 aa15.3■□□□□ 0.04
SYNE4-204ENST00000465425 HMGB3O15347 200 aaKnown RBP15.3■□□□□ 0.04
SYNE4-204ENST00000465425 ADH4P08319 380 aa15.3■□□□□ 0.04
SYNE4-204ENST00000465425 PSMB3P49720 205 aa15.3■□□□□ 0.04
SYNE4-204ENST00000465425 LTC4SQ16873 150 aa15.3■□□□□ 0.04
SYNE4-204ENST00000465425 MBNL2Q5VZF2 373 aaKnown RBP15.3■□□□□ 0.04
SYNE4-204ENST00000465425 OR10G9Q8NGN4 311 aa15.3■□□□□ 0.04
SYNE4-204ENST00000465425 OR10G7Q8NGN6 311 aa15.3■□□□□ 0.04
SYNE4-204ENST00000465425 FAM210BQ96KR6 192 aa15.3■□□□□ 0.04
SYNE4-204ENST00000465425 SMIM7Q9BQ49 75 aa15.3■□□□□ 0.04
SYNE4-204ENST00000465425 PLSCR4Q9NRQ2 329 aa15.3■□□□□ 0.04
SYNE4-204ENST00000465425 CTXND1A0A1B0GTU2 59 aa15.29■□□□□ 0.04
SYNE4-204ENST00000465425 TRGC2P03986 189 aa15.29■□□□□ 0.04
SYNE4-204ENST00000465425 PMS2P11Q13670 270 aa15.29■□□□□ 0.04
SYNE4-204ENST00000465425 SPINK9Q5DT21 86 aa15.29■□□□□ 0.04
SYNE4-204ENST00000465425 FFAR4Q5NUL3 377 aa15.29■□□□□ 0.04
SYNE4-204ENST00000465425 OR13D1Q8NGV5 346 aa15.29■□□□□ 0.04
SYNE4-204ENST00000465425 EDARADDQ8WWZ3 215 aa15.29■□□□□ 0.04
SYNE4-204ENST00000465425 MRPL37Q9BZE1 423 aaKnown RBP15.29■□□□□ 0.04
SYNE4-204ENST00000465425 USF3Q68DE3 2245 aa15.29■□□□□ 0.04
SYNE4-204ENST00000465425 IGHV1-18A0A0C4DH31 117 aa15.29■□□□□ 0.04
SYNE4-204ENST00000465425 IGLV1-44P01699 117 aa15.29■□□□□ 0.04
SYNE4-204ENST00000465425 PRDX2P32119 198 aa15.29■□□□□ 0.04
SYNE4-204ENST00000465425 CDX1P47902 265 aaPredicted RBP15.29■□□□□ 0.04
SYNE4-204ENST00000465425 LINC00205P59089 165 aa15.29■□□□□ 0.04
SYNE4-204ENST00000465425 RPS16P62249 146 aaKnown RBP15.29■□□□□ 0.04
SYNE4-204ENST00000465425 IGFL2Q6UWQ7 119 aa15.29■□□□□ 0.04
SYNE4-204ENST00000465425 OR2Z1Q8NG97 314 aa15.29■□□□□ 0.04
SYNE4-204ENST00000465425 GSN-AS1Q9NRJ2 163 aa15.29■□□□□ 0.04
SYNE4-204ENST00000465425 PROCRQ9UNN8 238 aa15.29■□□□□ 0.04
SYNE4-204ENST00000465425 PMS2P5A8MQ11 134 aa15.28■□□□□ 0.04
SYNE4-204ENST00000465425 GPR12P47775 334 aa15.28■□□□□ 0.04
SYNE4-204ENST00000465425 RND2P52198 227 aa15.28■□□□□ 0.04
SYNE4-204ENST00000465425 CD81P60033 236 aa15.28■□□□□ 0.04
SYNE4-204ENST00000465425 HTD2P86397 168 aa15.28■□□□□ 0.04
SYNE4-204ENST00000465425 WDR25Q64LD2 544 aaPredicted RBP15.28■□□□□ 0.04
SYNE4-204ENST00000465425 C1orf174Q8IYL3 243 aa15.28■□□□□ 0.04
SYNE4-204ENST00000465425 CD177Q8N6Q3 437 aa15.28■□□□□ 0.04
SYNE4-204ENST00000465425 OPN3Q9H1Y3 402 aaPredicted RBP15.28■□□□□ 0.04
SYNE4-204ENST00000465425 GNG12Q9UBI6 72 aa15.28■□□□□ 0.04
SYNE4-204ENST00000465425 NAT8Q9UHE5 227 aa15.28■□□□□ 0.04
SYNE4-204ENST00000465425 CHD3Q12873 2000 aaKnown RBP15.28■□□□□ 0.04
SYNE4-204ENST00000465425 HIST1H2BKO60814 126 aa15.28■□□□□ 0.04
SYNE4-204ENST00000465425 HIST1H2BJP06899 126 aa15.28■□□□□ 0.04
SYNE4-204ENST00000465425 HIST1H2BOP23527 126 aa15.28■□□□□ 0.04
SYNE4-204ENST00000465425 S100A2P29034 98 aa15.28■□□□□ 0.04
SYNE4-204ENST00000465425 HIST1H2BBP33778 126 aa15.28■□□□□ 0.04
SYNE4-204ENST00000465425 HIST1H2BDP58876 126 aa15.28■□□□□ 0.04
SYNE4-204ENST00000465425 HIST1H2BCP62807 126 aa15.28■□□□□ 0.04
SYNE4-204ENST00000465425 NKX6-1P78426 367 aaPredicted RBP15.28■□□□□ 0.04
SYNE4-204ENST00000465425 ADIRFQ15847 76 aa15.28■□□□□ 0.04
SYNE4-204ENST00000465425 HIST2H2BEQ16778 126 aa15.28■□□□□ 0.04
SYNE4-204ENST00000465425 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.28■□□□□ 0.04
SYNE4-204ENST00000465425 NCR3LG1Q68D85 454 aa15.28■□□□□ 0.04
SYNE4-204ENST00000465425 HIST1H2BHQ93079 126 aa15.28■□□□□ 0.04
SYNE4-204ENST00000465425 HIST1H2BNQ99877 126 aa15.28■□□□□ 0.04
SYNE4-204ENST00000465425 HIST1H2BMQ99879 126 aa15.28■□□□□ 0.04
SYNE4-204ENST00000465425 AGMATQ9BSE5 352 aa15.28■□□□□ 0.04
SYNE4-204ENST00000465425 DCTN5Q9BTE1 182 aa15.28■□□□□ 0.04
SYNE4-204ENST00000465425 NPCDR1Q9BY65 106 aa15.28■□□□□ 0.04
SYNE4-204ENST00000465425 ACTR3CQ9C0K3 210 aaPredicted RBP15.28■□□□□ 0.04
SYNE4-204ENST00000465425 C17orf112F2Z3M2 114 aa15.27■□□□□ 0.04
SYNE4-204ENST00000465425 OPN1MWP04001 364 aa15.27■□□□□ 0.04
SYNE4-204ENST00000465425 OPN1MW2P0DN77 364 aa15.27■□□□□ 0.04
SYNE4-204ENST00000465425 OPN1MW3P0DN78 364 aa15.27■□□□□ 0.04
SYNE4-204ENST00000465425 TFF3Q07654 80 aa15.27■□□□□ 0.04
SYNE4-204ENST00000465425 R3HDM4Q96D70 268 aa15.27■□□□□ 0.04
SYNE4-204ENST00000465425 CTDSP1Q9GZU7 261 aa15.27■□□□□ 0.04
SYNE4-204ENST00000465425 OR51M1Q9H341 326 aa15.27■□□□□ 0.04
SYNE4-204ENST00000465425 DUSP13Q9UII6 198 aa15.27■□□□□ 0.04
SYNE4-204ENST00000465425 AHRRA9YTQ3 701 aa15.27■□□□□ 0.03
SYNE4-204ENST00000465425 C15orf65H3BRN8 121 aa15.27■□□□□ 0.03
SYNE4-204ENST00000465425 GZMHP20718 246 aa15.27■□□□□ 0.03
SYNE4-204ENST00000465425 P2RY6Q15077 328 aa15.27■□□□□ 0.03
SYNE4-204ENST00000465425 BHLHA15Q7RTS1 189 aaPredicted RBP15.27■□□□□ 0.03
SYNE4-204ENST00000465425 DEFB124Q8NES8 71 aa15.27■□□□□ 0.03
SYNE4-204ENST00000465425 RPUSD4Q96CM3 377 aaKnown RBP15.27■□□□□ 0.03
SYNE4-204ENST00000465425 PLPPR2Q96GM1 343 aa15.27■□□□□ 0.03
SYNE4-204ENST00000465425 MANBALQ9NQG1 85 aa15.27■□□□□ 0.03
SYNE4-204ENST00000465425 ZNF71Q9NQZ8 489 aaPredicted RBP15.27■□□□□ 0.03
SYNE4-204ENST00000465425 GAR1Q9NY12 217 aaKnown RBP15.27■□□□□ 0.03
SYNE4-204ENST00000465425 MIOXQ9UGB7 285 aa15.27■□□□□ 0.03
SYNE4-204ENST00000465425 ASPMQ8IZT6 3477 aa15.26■□□□□ 0.03
SYNE4-204ENST00000465425 FTH1P19P0C7X4 201 aa15.26■□□□□ 0.03
SYNE4-204ENST00000465425 PAX5Q02548 391 aa15.26■□□□□ 0.03
SYNE4-204ENST00000465425 TLE1Q04724 770 aa15.26■□□□□ 0.03
SYNE4-204ENST00000465425 TMEM241Q24JQ0 296 aa15.26■□□□□ 0.03
SYNE4-204ENST00000465425 ALKBH2Q6NS38 261 aa15.26■□□□□ 0.03
SYNE4-204ENST00000465425 CYP2G1PQ6ZSU1 146 aa15.26■□□□□ 0.03
SYNE4-204ENST00000465425 TMEM250H0YL14 139 aa15.26■□□□□ 0.03
SYNE4-204ENST00000465425 TGOLN2O43493 480 aa15.26■□□□□ 0.03
SYNE4-204ENST00000465425 FCGR3BO75015 233 aa15.26■□□□□ 0.03
SYNE4-204ENST00000465425 TNFSF13O75888 250 aa15.26■□□□□ 0.03
SYNE4-204ENST00000465425 S100PP25815 95 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms